RNA–Protein interactions for RNA: YDR171W

HSP42, Transcript of Small heat shock protein (sHSP) with chaperone activity, yeastyeast

Gene HSP42, Length 1,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSP42YDR171W YTA7P40340 1379 aa5.52□□□□□ -1.53
HSP42YDR171W IKI3Q06706 1349 aaKnown RBP5.51□□□□□ -1.53
HSP42YDR171W PUB1P32588 453 aaKnown RBP RIP-Chip data5.51□□□□□ -1.53not detected
HSP42YDR171W SLA2P33338 968 aa5.51□□□□□ -1.53
HSP42YDR171W MAC1P35192 417 aa5.51□□□□□ -1.53
HSP42YDR171W PBY1P38254 753 aa5.51□□□□□ -1.53
HSP42YDR171W PFD1P46988 109 aa5.51□□□□□ -1.53
HSP42YDR171W HUL5P53119 910 aa5.51□□□□□ -1.53
HSP42YDR171W NSE3Q05541 303 aa5.51□□□□□ -1.53
HSP42YDR171W BDF2Q07442 638 aa5.51□□□□□ -1.53
HSP42YDR171W BRE4Q07660 1125 aa5.51□□□□□ -1.53
HSP42YDR171W FMP25Q08023 583 aa5.51□□□□□ -1.53
HSP42YDR171W ESP1Q03018 1630 aa5.5□□□□□ -1.53
HSP42YDR171W SRP40P32583 406 aaPredicted RBP5.5□□□□□ -1.53
HSP42YDR171W ENP1P38333 483 aaKnown RBP5.5□□□□□ -1.53
HSP42YDR171W INP52P50942 1183 aa5.5□□□□□ -1.53
HSP42YDR171W TAF2P23255 1407 aa5.49□□□□□ -1.53
HSP42YDR171W BI4P03879 638 aa5.49□□□□□ -1.53
HSP42YDR171W SPS1P08458 490 aa5.49□□□□□ -1.53
HSP42YDR171W RPL8BP29453 256 aaKnown RBP5.49□□□□□ -1.53
HSP42YDR171W HSP78P33416 811 aa5.49□□□□□ -1.53
HSP42YDR171W GEM1P39722 662 aa5.49□□□□□ -1.53
HSP42YDR171W ALR2P43553 858 aa5.49□□□□□ -1.53
HSP42YDR171W DUS3Q06053 668 aaKnown RBP5.49□□□□□ -1.53
HSP42YDR171W EAF1Q06337 982 aa5.49□□□□□ -1.53
HSP42YDR171W YDR306CQ06640 478 aa5.49□□□□□ -1.53
HSP42YDR171W UBX5Q06682 500 aa5.49□□□□□ -1.53
HSP42YDR171W SPO75Q07798 868 aa5.49□□□□□ -1.53
HSP42YDR171W LPX1Q12405 387 aaKnown RBP5.49□□□□□ -1.53
HSP42YDR171W OSH2Q12451 1283 aa5.49□□□□□ -1.53
HSP42YDR171W POL1P13382 1468 aa5.49□□□□□ -1.53
HSP42YDR171W YKL091CP33324 310 aaKnown RBP5.48□□□□□ -1.53
HSP42YDR171W YGR125WP53273 1036 aa5.48□□□□□ -1.53
HSP42YDR171W MAP1Q01662 387 aaKnown RBP RIP-Chip data5.48□□□□□ -1.53not detected
HSP42YDR171W HRQ1Q05549 1077 aa5.48□□□□□ -1.53
HSP42YDR171W MON2P48563 1636 aaPredicted RBP5.48□□□□□ -1.53
HSP42YDR171W STI1P15705 589 aaKnown RBP RIP-Chip data5.47□□□□□ -1.53not detected
HSP42YDR171W PRP9P19736 530 aaKnown RBP5.47□□□□□ -1.53
HSP42YDR171W ARE1P25628 610 aa5.47□□□□□ -1.53
HSP42YDR171W YHR020WP38708 688 aaKnown RBP5.47□□□□□ -1.53
HSP42YDR171W SAH1P39954 449 aaKnown RBP5.47□□□□□ -1.53
HSP42YDR171W ERP6P53198 216 aa5.47□□□□□ -1.53
HSP42YDR171W FLC1Q08967 793 aa5.47□□□□□ -1.53
HSP42YDR171W SVS1Q12254 260 aa5.47□□□□□ -1.53
HSP42YDR171W NUP170P38181 1502 aa5.47□□□□□ -1.53
HSP42YDR171W GLT1Q12680 2145 aaKnown RBP5.47□□□□□ -1.53
HSP42YDR171W HSP60P19882 572 aaKnown RBP5.46□□□□□ -1.54
HSP42YDR171W PPH3P32345 308 aa5.46□□□□□ -1.54
HSP42YDR171W AAR2P32357 355 aaPredicted RBP5.46□□□□□ -1.54
HSP42YDR171W YKL151CP36059 337 aa5.46□□□□□ -1.54
HSP42YDR171W ORC1P54784 914 aaPredicted RBP5.46□□□□□ -1.54
HSP42YDR171W POL12P38121 705 aaPredicted RBP5.45□□□□□ -1.54
HSP42YDR171W SEC26P41810 973 aaKnown RBP5.45□□□□□ -1.54
HSP42YDR171W GUS1P46655 708 aaKnown RBP RIP-Chip data5.45□□□□□ -1.54not detected
HSP42YDR171W FOL2P51601 243 aaKnown RBP5.45□□□□□ -1.54
HSP42YDR171W YOR131CQ12486 218 aa5.45□□□□□ -1.54
HSP42YDR171W CIT1P00890 479 aa5.44□□□□□ -1.54
HSP42YDR171W THS1P04801 734 aaKnown RBP5.44□□□□□ -1.54
HSP42YDR171W ACE2P21192 770 aa5.44□□□□□ -1.54
HSP42YDR171W CDC12P32468 407 aaKnown RBP5.44□□□□□ -1.54
HSP42YDR171W HBS1P32769 611 aaKnown RBP5.44□□□□□ -1.54
HSP42YDR171W ABZ1P37254 787 aaPredicted RBP5.44□□□□□ -1.54
HSP42YDR171W YBR284WP38150 797 aa5.44□□□□□ -1.54
HSP42YDR171W RFC5P38251 354 aa5.44□□□□□ -1.54
HSP42YDR171W ETP1P38748 585 aaKnown RBP5.44□□□□□ -1.54
HSP42YDR171W CCC2P38995 1004 aa5.44□□□□□ -1.54
HSP42YDR171W UTP8P53276 713 aaKnown RBP5.44□□□□□ -1.54
HSP42YDR171W SRP1Q02821 542 aaKnown RBP5.44□□□□□ -1.54
HSP42YDR171W LRG1P35688 1017 aa5.43□□□□□ -1.54
HSP42YDR171W ERT1P38140 529 aa5.43□□□□□ -1.54
HSP42YDR171W PBP2P38151 413 aaKnown RBP RIP-Chip data5.43□□□□□ -1.54not detected
HSP42YDR171W RSP5P39940 809 aaKnown RBP5.43□□□□□ -1.54
HSP42YDR171W HFM1P51979 1187 aa5.43□□□□□ -1.54
HSP42YDR171W TPO2P53283 614 aa5.43□□□□□ -1.54
HSP42YDR171W MDM38Q08179 573 aa5.43□□□□□ -1.54
HSP42YDR171W MYO4P32492 1471 aa5.43□□□□□ -1.54
HSP42YDR171W SEC3P33332 1336 aaKnown RBP5.43□□□□□ -1.54
HSP42YDR171W ECM5Q03214 1411 aa5.42□□□□□ -1.54
HSP42YDR171W APL1P27351 700 aa5.42□□□□□ -1.54
HSP42YDR171W MTC3P53077 123 aa5.42□□□□□ -1.54
HSP42YDR171W ORC3P54790 616 aa5.42□□□□□ -1.54
HSP42YDR171W ATG13Q06628 738 aa5.42□□□□□ -1.54
HSP42YDR171W YDL177CQ12257 170 aa5.42□□□□□ -1.54
HSP42YDR171W RIB2Q12362 591 aaKnown RBP5.42□□□□□ -1.54
HSP42YDR171W DFG16Q99234 619 aa5.42□□□□□ -1.54
HSP42YDR171W STH1P32597 1359 aa5.42□□□□□ -1.54
HSP42YDR171W YRO2P38079 344 aa5.41□□□□□ -1.54
HSP42YDR171W GIC1P38785 314 aa5.41□□□□□ -1.54
HSP42YDR171W RRT14P40470 206 aa5.41□□□□□ -1.54
HSP42YDR171W RPN4Q03465 531 aa5.41□□□□□ -1.54
HSP42YDR171W XYL2Q07993 356 aa5.41□□□□□ -1.54
HSP42YDR171W HBN1Q96VH4 193 aa5.41□□□□□ -1.54
HSP42YDR171W BPT1P14772 1559 aa5.41□□□□□ -1.54
HSP42YDR171W SCC2Q04002 1493 aa5.4□□□□□ -1.54
HSP42YDR171W CAN1P04817 590 aa5.4□□□□□ -1.54
HSP42YDR171W TOP3P13099 656 aa5.4□□□□□ -1.54
HSP42YDR171W NPP1P25353 742 aa5.4□□□□□ -1.54
HSP42YDR171W NPP2P39997 493 aa5.4□□□□□ -1.54
HSP42YDR171W HUL4P40985 892 aa5.4□□□□□ -1.54
HSP42YDR171W TAF8Q03750 510 aa5.4□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 49.3 ms