RNA–Protein interactions for RNA: YCR021C

HSP30, Transcript of Negative regulator of the H(+)-ATPase Pma1p, yeast

Gene HSP30, Length 999 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HSP30	YCR021C	YFL034W	P43564	1073 aa		4.66	□□□□□ -1.66
HSP30	YCR021C	CWC15	Q03772	175 aa	Known RBP	4.66	□□□□□ -1.66
HSP30	YCR021C	EST2	Q06163	884 aa		4.66	□□□□□ -1.66
HSP30	YCR021C	THI72	Q08579	599 aa		4.66	□□□□□ -1.66
HSP30	YCR021C	AI1	P03875	834 aa		4.65	□□□□□ -1.67
HSP30	YCR021C	MET6	P05694	767 aa	Known RBP	4.65	□□□□□ -1.67
HSP30	YCR021C	RPS9B	P05755	195 aa	Known RBP	4.65	□□□□□ -1.67
HSP30	YCR021C	RPS31	P05759	152 aa	Known RBP	4.65	□□□□□ -1.67
HSP30	YCR021C	CDC6	P09119	513 aa		4.65	□□□□□ -1.67
HSP30	YCR021C	MATALPHA2	P0CY08	210 aa		4.65	□□□□□ -1.67
HSP30	YCR021C	HMLALPHA2	P0CY09	210 aa		4.65	□□□□□ -1.67
HSP30	YCR021C	MAK31	P23059	88 aa		4.65	□□□□□ -1.67
HSP30	YCR021C	SWI4	P25302	1093 aa	Known RBP	4.65	□□□□□ -1.67
HSP30	YCR021C	IME2	P32581	645 aa		4.65	□□□□□ -1.67
HSP30	YCR021C	CST26	P38226	397 aa		4.65	□□□□□ -1.67
HSP30	YCR021C	RPN10	P38886	268 aa	Known RBP	4.65	□□□□□ -1.67
HSP30	YCR021C	YFL066C	P43538	392 aa		4.65	□□□□□ -1.67
HSP30	YCR021C	GIS4	Q04233	774 aa		4.65	□□□□□ -1.67
HSP30	YCR021C	SKG3	Q06315	1026 aa		4.65	□□□□□ -1.67
HSP30	YCR021C	GSC2	P40989	1895 aa		4.64	□□□□□ -1.67
HSP30	YCR021C	NUC1	P08466	329 aa		4.64	□□□□□ -1.67
HSP30	YCR021C	MCM1	P11746	286 aa		4.64	□□□□□ -1.67
HSP30	YCR021C	GEF1	P37020	779 aa		4.64	□□□□□ -1.67
HSP30	YCR021C	MRPL16	P38064	232 aa		4.64	□□□□□ -1.67
HSP30	YCR021C	TPS3	P38426	1054 aa	Known RBP	4.64	□□□□□ -1.67
HSP30	YCR021C	SPO22	P40511	975 aa		4.64	□□□□□ -1.67
HSP30	YCR021C	PCI8	P40512	444 aa		4.64	□□□□□ -1.67
HSP30	YCR021C	FOL1	P53848	824 aa		4.64	□□□□□ -1.67
HSP30	YCR021C	RPT6	Q01939	405 aa	Known RBP	4.64	□□□□□ -1.67
HSP30	YCR021C	VPS30	Q02948	557 aa		4.64	□□□□□ -1.67
HSP30	YCR021C	HRQ1	Q05549	1077 aa		4.64	□□□□□ -1.67
HSP30	YCR021C	YLR407W	Q06070	228 aa		4.64	□□□□□ -1.67
HSP30	YCR021C	PUS1	Q12211	544 aa	Known RBP	4.64	□□□□□ -1.67
HSP30	YCR021C	TSC13	Q99190	310 aa		4.64	□□□□□ -1.67
HSP30	YCR021C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.63	□□□□□ -1.67	not detected
HSP30	YCR021C	RPL19A	P0CX82	189 aa	Known RBP	4.63	□□□□□ -1.67
HSP30	YCR021C	RPL19B	P0CX83	189 aa	Predicted RBP	4.63	□□□□□ -1.67
HSP30	YCR021C	PDC6	P26263	563 aa	Known RBP	4.63	□□□□□ -1.67
HSP30	YCR021C	RPL8B	P29453	256 aa	Known RBP	4.63	□□□□□ -1.67
HSP30	YCR021C	SHP1	P34223	423 aa		4.63	□□□□□ -1.67
HSP30	YCR021C	ASE1	P50275	885 aa		4.63	□□□□□ -1.67
HSP30	YCR021C	YKE2	P52553	114 aa		4.63	□□□□□ -1.67
HSP30	YCR021C	YGL039W	P53183	348 aa	Known RBP	4.63	□□□□□ -1.67
HSP30	YCR021C	YML037C	Q03703	340 aa		4.63	□□□□□ -1.67
HSP30	YCR021C	GIN4	Q12263	1142 aa		4.63	□□□□□ -1.67
HSP30	YCR021C	TOM1	Q03280	3268 aa		4.62	□□□□□ -1.67
HSP30	YCR021C	HSP82	P02829	709 aa	Known RBP	4.62	□□□□□ -1.67
HSP30	YCR021C	LEU1	P07264	779 aa	Known RBP	4.62	□□□□□ -1.67
HSP30	YCR021C	SAM1	P10659	382 aa	Known RBP	4.62	□□□□□ -1.67
HSP30	YCR021C	RNR3	P21672	869 aa	Known RBP	4.62	□□□□□ -1.67
HSP30	YCR021C	RDS1	P25611	832 aa		4.62	□□□□□ -1.67
HSP30	YCR021C	PRX1	P34227	261 aa	Known RBP	4.62	□□□□□ -1.67
HSP30	YCR021C	RFC5	P38251	354 aa		4.62	□□□□□ -1.67
HSP30	YCR021C	YNL165W	P53891	406 aa		4.62	□□□□□ -1.67
HSP30	YCR021C	MDM1	Q01846	1127 aa		4.62	□□□□□ -1.67
HSP30	YCR021C	TMA64	Q04600	565 aa	Known RBP	4.62	□□□□□ -1.67
HSP30	YCR021C	SMD2	Q06217	110 aa	Known RBP	4.62	□□□□□ -1.67
HSP30	YCR021C	UBX5	Q06682	500 aa		4.62	□□□□□ -1.67
HSP30	YCR021C	DSE3	Q08729	430 aa		4.62	□□□□□ -1.67
HSP30	YCR021C	DCS2	Q12123	353 aa		4.62	□□□□□ -1.67
HSP30	YCR021C	TUS1	Q06412	1307 aa		4.62	□□□□□ -1.67
HSP30	YCR021C	HVG1	P0CE11	249 aa		4.61	□□□□□ -1.67
HSP30	YCR021C	BIK1	P11709	440 aa		4.61	□□□□□ -1.67
HSP30	YCR021C	GAL2	P13181	574 aa		4.61	□□□□□ -1.67
HSP30	YCR021C	FRS2	P15625	503 aa	Known RBP	4.61	□□□□□ -1.67
HSP30	YCR021C	FPS1	P23900	669 aa		4.61	□□□□□ -1.67
HSP30	YCR021C	MAL33	P38157	468 aa		4.61	□□□□□ -1.67
HSP30	YCR021C	RXT2	P38255	430 aa		4.61	□□□□□ -1.67
HSP30	YCR021C	ETP1	P38748	585 aa	Known RBP	4.61	□□□□□ -1.67
HSP30	YCR021C	ACS2	P52910	683 aa	Known RBP	4.61	□□□□□ -1.67
HSP30	YCR021C	YDR341C	Q05506	607 aa	Known RBP	4.61	□□□□□ -1.67
HSP30	YCR021C	UTP4	Q06679	776 aa	Known RBP	4.61	□□□□□ -1.67
HSP30	YCR021C	OXR1	Q08952	273 aa		4.61	□□□□□ -1.67
HSP30	YCR021C	ELG1	Q12050	791 aa		4.61	□□□□□ -1.67
HSP30	YCR021C	YPL150W	Q12152	901 aa		4.61	□□□□□ -1.67
HSP30	YCR021C	PTC5	Q12511	572 aa		4.61	□□□□□ -1.67
HSP30	YCR021C	CIT1	P00890	479 aa		4.6	□□□□□ -1.67
HSP30	YCR021C	RAD18	P10862	487 aa		4.6	□□□□□ -1.67
HSP30	YCR021C	TPM1	P17536	199 aa	Known RBP	4.6	□□□□□ -1.67
HSP30	YCR021C	MCM4	P30665	933 aa	Known RBP	4.6	□□□□□ -1.67
HSP30	YCR021C	MAL31	P38156	614 aa		4.6	□□□□□ -1.67
HSP30	YCR021C	VPS45	P38932	577 aa		4.6	□□□□□ -1.67
HSP30	YCR021C	BUD6	P41697	788 aa		4.6	□□□□□ -1.67
HSP30	YCR021C	SNU71	P53207	620 aa	Known RBP	4.6	□□□□□ -1.67
HSP30	YCR021C	PEX19	Q07418	342 aa		4.6	□□□□□ -1.67
HSP30	YCR021C	STB3	Q12427	513 aa		4.6	□□□□□ -1.67
HSP30	YCR021C	RKM4	Q12504	494 aa		4.6	□□□□□ -1.67
HSP30	YCR021C	Q0182	Q9ZZW1	134 aa		4.6	□□□□□ -1.67
HSP30	YCR021C	GPM1	P00950	247 aa	Known RBP	4.59	□□□□□ -1.67
HSP30	YCR021C	CYT1	P07143	309 aa		4.59	□□□□□ -1.67
HSP30	YCR021C	PHO87	P25360	923 aa		4.59	□□□□□ -1.67
HSP30	YCR021C	URA1	P28272	314 aa	Predicted RBP	4.59	□□□□□ -1.67
HSP30	YCR021C	UTR4	P32626	227 aa		4.59	□□□□□ -1.67
HSP30	YCR021C	TGL1	P34163	548 aa		4.59	□□□□□ -1.67
HSP30	YCR021C	BMH2	P34730	273 aa	Known RBP	4.59	□□□□□ -1.67
HSP30	YCR021C	SIS2	P36024	562 aa		4.59	□□□□□ -1.67
HSP30	YCR021C	DID4	P36108	232 aa		4.59	□□□□□ -1.67
HSP30	YCR021C	PHO88	P38264	188 aa	Predicted RBP	4.59	□□□□□ -1.67
HSP30	YCR021C	YHL017W	P38745	532 aa		4.59	□□□□□ -1.67
HSP30	YCR021C	LYS14	P40971	790 aa		4.59	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 47.5 ms