RNA–Protein interactions for RNA: YCL036W

GFD2, Transcript of Protein of unknown function, yeast

Gene GFD2, Length 1,701 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GFD2	YCL036W	ALF1	P53904	254 aa		13.33	□□□□□ -0.28
GFD2	YCL036W	ERG5	P54781	538 aa		13.33	□□□□□ -0.28
GFD2	YCL036W	YLR326W	Q06170	240 aa	Known RBP	13.33	□□□□□ -0.28
GFD2	YCL036W	TCO89	Q08921	799 aa		13.33	□□□□□ -0.28
GFD2	YCL036W	YOL098C	Q12496	1037 aa		13.33	□□□□□ -0.28
GFD2	YCL036W	SUP45	P12385	437 aa	Known RBP	13.32	□□□□□ -0.28
GFD2	YCL036W	ESS1	P22696	170 aa		13.32	□□□□□ -0.28
GFD2	YCL036W	UBP11	P36026	717 aa		13.32	□□□□□ -0.28
GFD2	YCL036W	PEA2	P40091	420 aa		13.32	□□□□□ -0.28
GFD2	YCL036W	SEC9	P40357	651 aa		13.32	□□□□□ -0.28
GFD2	YCL036W	GPD2	P41911	440 aa	Known RBP	13.32	□□□□□ -0.28
GFD2	YCL036W	CTR1	P49573	406 aa		13.32	□□□□□ -0.28
GFD2	YCL036W	NBP1	P52919	319 aa	Predicted RBP	13.32	□□□□□ -0.28
GFD2	YCL036W	UME1	Q03010	460 aa		13.32	□□□□□ -0.28
GFD2	YCL036W	UBX5	Q06682	500 aa		13.32	□□□□□ -0.28
GFD2	YCL036W	SPO12	P17123	173 aa		13.31	□□□□□ -0.28
GFD2	YCL036W	CCC2	P38995	1004 aa		13.31	□□□□□ -0.28
GFD2	YCL036W	CEP3	P40969	608 aa		13.31	□□□□□ -0.28
GFD2	YCL036W	APT1	P49435	187 aa	Known RBP	13.31	□□□□□ -0.28
GFD2	YCL036W	CAF130	P53280	1122 aa	Predicted RBP	13.31	□□□□□ -0.28
GFD2	YCL036W	ALD6	P54115	500 aa	Known RBP	13.31	□□□□□ -0.28
GFD2	YCL036W	SPH1	Q06160	661 aa		13.31	□□□□□ -0.28
GFD2	YCL036W	MAK16	P10962	306 aa	Predicted RBP	13.3	□□□□□ -0.28
GFD2	YCL036W	YDJ1	P25491	409 aa	Known RBP	13.3	□□□□□ -0.28
GFD2	YCL036W	PGM1	P33401	570 aa	Known RBP	13.3	□□□□□ -0.28
GFD2	YCL036W	OCT1	P35999	772 aa		13.3	□□□□□ -0.28
GFD2	YCL036W	UBP5	P39944	805 aa		13.3	□□□□□ -0.28
GFD2	YCL036W	SHQ1	P40486	507 aa	Predicted RBP	13.3	□□□□□ -0.28
GFD2	YCL036W	PUS5	Q06244	254 aa		13.3	□□□□□ -0.28
GFD2	YCL036W	PRP22	P24384	1145 aa	Known RBP	13.3	□□□□□ -0.28
GFD2	YCL036W	RPC53	P25441	422 aa		13.3	□□□□□ -0.28
GFD2	YCL036W	STO1	P34160	861 aa	Known RBP	13.3	□□□□□ -0.28
GFD2	YCL036W	PNT1	P38969	423 aa		13.3	□□□□□ -0.28
GFD2	YCL036W	CNM67	P53865	581 aa	Known RBP	13.3	□□□□□ -0.28
GFD2	YCL036W	SEC5	P89102	971 aa		13.3	□□□□□ -0.28
GFD2	YCL036W	GUD1	Q07729	489 aa		13.3	□□□□□ -0.28
GFD2	YCL036W	SFI1	Q12369	946 aa		13.3	□□□□□ -0.28
GFD2	YCL036W	SRD1	P09007	221 aa		13.29	□□□□□ -0.28
GFD2	YCL036W	CLN3	P13365	580 aa		13.29	□□□□□ -0.28
GFD2	YCL036W	PER1	P25625	357 aa		13.29	□□□□□ -0.28
GFD2	YCL036W	TRK2	P28584	889 aa		13.29	□□□□□ -0.28
GFD2	YCL036W	SUV3	P32580	737 aa		13.29	□□□□□ -0.28
GFD2	YCL036W	YFL034W	P43564	1073 aa		13.29	□□□□□ -0.28
GFD2	YCL036W	TCB2	P48231	1178 aa		13.29	□□□□□ -0.28
GFD2	YCL036W	YGL039W	P53183	348 aa	Known RBP	13.29	□□□□□ -0.28
GFD2	YCL036W	DUS3	Q06053	668 aa	Known RBP	13.29	□□□□□ -0.28
GFD2	YCL036W	MTF2	P10849	440 aa		13.28	□□□□□ -0.28
GFD2	YCL036W	SEC23	P15303	768 aa	Known RBP	13.28	□□□□□ -0.28
GFD2	YCL036W	DAL7	P21826	554 aa		13.28	□□□□□ -0.28
GFD2	YCL036W	SHP1	P34223	423 aa		13.28	□□□□□ -0.28
GFD2	YCL036W	CAJ1	P39101	391 aa		13.28	□□□□□ -0.28
GFD2	YCL036W	CWC15	Q03772	175 aa	Known RBP	13.28	□□□□□ -0.28
GFD2	YCL036W	MCM16	Q12262	181 aa		13.28	□□□□□ -0.28
GFD2	YCL036W	PGK1	P00560	416 aa	Known RBP	13.27	□□□□□ -0.28
GFD2	YCL036W	UBC1	P21734	215 aa	Known RBP	13.27	□□□□□ -0.28
GFD2	YCL036W	NEW1	Q08972	1196 aa	Known RBP	13.27	□□□□□ -0.28
GFD2	YCL036W	PPR1	P07272	904 aa	Predicted RBP	13.27	□□□□□ -0.29
GFD2	YCL036W	SSB1	P11484	613 aa	Known RBP	13.27	□□□□□ -0.29
GFD2	YCL036W	PGM2	P37012	569 aa	Known RBP	13.27	□□□□□ -0.29
GFD2	YCL036W	SSB2	P40150	613 aa	Known RBP	13.27	□□□□□ -0.29
GFD2	YCL036W	IES1	P43579	692 aa		13.27	□□□□□ -0.29
GFD2	YCL036W	PTA1	Q01329	785 aa	Predicted RBP	13.27	□□□□□ -0.29
GFD2	YCL036W	VPS60	Q03390	229 aa		13.27	□□□□□ -0.29
GFD2	YCL036W	PHM6	Q05637	104 aa		13.27	□□□□□ -0.29
GFD2	YCL036W	YPL277C	Q08989	487 aa		13.27	□□□□□ -0.29
GFD2	YCL036W	PET111	P08468	800 aa		13.26	□□□□□ -0.29
GFD2	YCL036W	CDC60	P26637	1090 aa	Known RBP	13.26	□□□□□ -0.29
GFD2	YCL036W	MCR1	P36060	302 aa	Known RBP	13.26	□□□□□ -0.29
GFD2	YCL036W	TOF1	P53840	1238 aa		13.26	□□□□□ -0.29
GFD2	YCL036W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	13.25	□□□□□ -0.29	not detected
GFD2	YCL036W	APL1	P27351	700 aa		13.25	□□□□□ -0.29
GFD2	YCL036W	YEL1	P34225	687 aa		13.25	□□□□□ -0.29
GFD2	YCL036W	MED1	Q12321	566 aa		13.25	□□□□□ -0.29
GFD2	YCL036W	TUP1	P16649	713 aa		13.25	□□□□□ -0.29
GFD2	YCL036W	PDC6	P26263	563 aa	Known RBP	13.25	□□□□□ -0.29
GFD2	YCL036W	CLB5	P30283	435 aa		13.25	□□□□□ -0.29
GFD2	YCL036W	UTR4	P32626	227 aa		13.25	□□□□□ -0.29
GFD2	YCL036W	FIS1	P40515	155 aa		13.25	□□□□□ -0.29
GFD2	YCL036W	YAP5	P40574	245 aa		13.25	□□□□□ -0.29
GFD2	YCL036W	ARK1	P53974	638 aa		13.25	□□□□□ -0.29
GFD2	YCL036W	UTP5	Q04177	643 aa	Known RBP	13.25	□□□□□ -0.29
GFD2	YCL036W	PLP2	Q12017	286 aa		13.25	□□□□□ -0.29
GFD2	YCL036W	MCX1	P38323	520 aa	Predicted RBP	13.24	□□□□□ -0.29
GFD2	YCL036W	VAB2	P40003	282 aa		13.24	□□□□□ -0.29
GFD2	YCL036W	RPN3	P40016	523 aa	Known RBP	13.24	□□□□□ -0.29
GFD2	YCL036W	EFM4	P40516	257 aa		13.24	□□□□□ -0.29
GFD2	YCL036W	CRD1	Q07560	283 aa		13.24	□□□□□ -0.29
GFD2	YCL036W	PCK1	P10963	549 aa		13.23	□□□□□ -0.29
GFD2	YCL036W	RAD57	P25301	460 aa		13.23	□□□□□ -0.29
GFD2	YCL036W	MRF1	P30775	413 aa	Predicted RBP	13.23	□□□□□ -0.29
GFD2	YCL036W	XRS2	P33301	854 aa		13.23	□□□□□ -0.29
GFD2	YCL036W	BOP3	P53958	396 aa		13.23	□□□□□ -0.29
GFD2	YCL036W	SML1	Q04964	104 aa		13.23	□□□□□ -0.29
GFD2	YCL036W	TOM70	P07213	617 aa	Known RBP	13.22	□□□□□ -0.29
GFD2	YCL036W	TAD1	P53065	400 aa		13.22	□□□□□ -0.29
GFD2	YCL036W	FAL1	Q12099	399 aa	Known RBP	13.22	□□□□□ -0.29
GFD2	YCL036W	STE11	P23561	717 aa		13.22	□□□□□ -0.29
GFD2	YCL036W	NDC80	P40460	691 aa		13.22	□□□□□ -0.29
GFD2	YCL036W	CCM1	P48237	864 aa	Predicted RBP	13.22	□□□□□ -0.29
GFD2	YCL036W	VID30	P53076	958 aa		13.22	□□□□□ -0.29

Retrieved 100 of 5,963 RNA–protein pairs in 95.4 ms