RNA–Protein interactions for RNA: YBR260C

RGD1, Transcript of GTPase-activating protein (RhoGAP) for Rho3p and Rho4p, yeastyeast

Gene RGD1, Length 2,001 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RGD1YBR260C RTS1P38903 757 aa6.56□□□□□ -1.36
RGD1YBR260C MTR4P47047 1073 aaKnown RBP6.56□□□□□ -1.36
RGD1YBR260C UME1Q03010 460 aa6.56□□□□□ -1.36
RGD1YBR260C VPS16Q03308 798 aa6.56□□□□□ -1.36
RGD1YBR260C SGT2Q12118 346 aaKnown RBP6.56□□□□□ -1.36
RGD1YBR260C TOM70P07213 617 aaKnown RBP6.55□□□□□ -1.36
RGD1YBR260C SEC20P28791 383 aa6.55□□□□□ -1.36
RGD1YBR260C SSE1P32589 693 aaKnown RBP6.55□□□□□ -1.36
RGD1YBR260C STM1P39015 273 aaKnown RBP6.55□□□□□ -1.36
RGD1YBR260C FYV8P46949 817 aaKnown RBP6.55□□□□□ -1.36
RGD1YBR260C SET2P46995 733 aaKnown RBP6.55□□□□□ -1.36
RGD1YBR260C IMD4P50094 524 aaKnown RBP6.55□□□□□ -1.36
RGD1YBR260C RCF1Q03713 159 aa6.55□□□□□ -1.36
RGD1YBR260C YMR114CQ04471 368 aaKnown RBP6.55□□□□□ -1.36
RGD1YBR260C SOV1Q04748 898 aa6.55□□□□□ -1.36
RGD1YBR260C NSE1Q07913 336 aa6.55□□□□□ -1.36
RGD1YBR260C GPR1Q12361 961 aa6.55□□□□□ -1.36
RGD1YBR260C UTP10P42945 1769 aaKnown RBP6.55□□□□□ -1.36
RGD1YBR260C GFA1P14742 717 aaKnown RBP6.55□□□□□ -1.36
RGD1YBR260C THR1P17423 357 aaKnown RBP6.55□□□□□ -1.36
RGD1YBR260C PWP1P21304 576 aaKnown RBP6.55□□□□□ -1.36
RGD1YBR260C SLA1P32790 1244 aa6.55□□□□□ -1.36
RGD1YBR260C SQT1P35184 431 aa6.55□□□□□ -1.36
RGD1YBR260C CTM1P38818 585 aa6.55□□□□□ -1.36
RGD1YBR260C CCM1P48237 864 aaPredicted RBP6.55□□□□□ -1.36
RGD1YBR260C SQS1P53866 767 aaKnown RBP6.55□□□□□ -1.36
RGD1YBR260C YMR111CQ04461 462 aaPredicted RBP6.55□□□□□ -1.36
RGD1YBR260C IES3Q12345 250 aa6.55□□□□□ -1.36
RGD1YBR260C NCB2Q92317 146 aa6.55□□□□□ -1.36
RGD1YBR260C RPL24AP04449 155 aaKnown RBP6.54□□□□□ -1.36
RGD1YBR260C DPS1P04802 557 aaKnown RBP6.54□□□□□ -1.36
RGD1YBR260C HSC82P15108 705 aaKnown RBP6.54□□□□□ -1.36
RGD1YBR260C ADE2P21264 571 aaKnown RBP6.54□□□□□ -1.36
RGD1YBR260C APL1P27351 700 aa6.54□□□□□ -1.36
RGD1YBR260C EFB1P32471 206 aaKnown RBP6.54□□□□□ -1.36
RGD1YBR260C BRL1P38770 471 aa6.54□□□□□ -1.36
RGD1YBR260C MPT5P39016 859 aaKnown RBP RIP-Chip data6.54□□□□□ -1.36 RIP-Chip
RGD1YBR260C TDA10P42938 290 aa6.54□□□□□ -1.36
RGD1YBR260C BTN2P53286 410 aa6.54□□□□□ -1.36
RGD1YBR260C LSC2P53312 427 aa6.54□□□□□ -1.36
RGD1YBR260C PKH3Q03306 898 aaPredicted RBP6.54□□□□□ -1.36
RGD1YBR260C VTI1Q04338 217 aa6.54□□□□□ -1.36
RGD1YBR260C HFD1Q04458 532 aa6.54□□□□□ -1.36
RGD1YBR260C YLR287CQ05881 355 aa6.54□□□□□ -1.36
RGD1YBR260C MEU1Q07938 337 aaKnown RBP RIP-Chip data6.54□□□□□ -1.36not detected
RGD1YBR260C GPN2Q08726 347 aaPredicted RBP6.54□□□□□ -1.36
RGD1YBR260C TAF10Q12030 206 aa6.54□□□□□ -1.36
RGD1YBR260C MSH5Q12175 901 aa6.54□□□□□ -1.36
RGD1YBR260C CLF1Q12309 687 aaPredicted RBP6.54□□□□□ -1.36
RGD1YBR260C HTZ1Q12692 134 aaKnown RBP6.54□□□□□ -1.36
RGD1YBR260C APC1P53886 1748 aa6.54□□□□□ -1.36
RGD1YBR260C RPS24AP0CX31 135 aaKnown RBP6.54□□□□□ -1.36
RGD1YBR260C RPS24BP0CX32 135 aaKnown RBP6.54□□□□□ -1.36
RGD1YBR260C PGI1P12709 554 aaKnown RBP6.54□□□□□ -1.36
RGD1YBR260C CKI1P20485 582 aa6.54□□□□□ -1.36
RGD1YBR260C YCR051WP25631 222 aa6.54□□□□□ -1.36
RGD1YBR260C SIN4P32259 974 aa6.54□□□□□ -1.36
RGD1YBR260C IMP2'P32351 346 aa6.54□□□□□ -1.36
RGD1YBR260C ATG14P38270 344 aa6.54□□□□□ -1.36
RGD1YBR260C YLF2P38746 405 aa6.54□□□□□ -1.36
RGD1YBR260C ARB1P40024 610 aaKnown RBP6.54□□□□□ -1.36
RGD1YBR260C YNL320WP42840 284 aa6.54□□□□□ -1.36
RGD1YBR260C YGR237CP50089 785 aa6.54□□□□□ -1.36
RGD1YBR260C ESBP6P53918 673 aa6.54□□□□□ -1.36
RGD1YBR260C UTP5Q04177 643 aaKnown RBP6.54□□□□□ -1.36
RGD1YBR260C POB3Q04636 552 aaKnown RBP6.54□□□□□ -1.36
RGD1YBR260C OPY2Q06810 360 aa6.54□□□□□ -1.36
RGD1YBR260C PDC6P26263 563 aaKnown RBP6.53□□□□□ -1.36
RGD1YBR260C SLA2P33338 968 aa6.53□□□□□ -1.36
RGD1YBR260C PPX1P38698 397 aa6.53□□□□□ -1.36
RGD1YBR260C VMA22P38784 181 aa6.53□□□□□ -1.36
RGD1YBR260C PEX18P38855 283 aa6.53□□□□□ -1.36
RGD1YBR260C YEL023CP39992 682 aa6.53□□□□□ -1.36
RGD1YBR260C ATG36P46983 293 aa6.53□□□□□ -1.36
RGD1YBR260C YML108WQ03759 105 aa6.53□□□□□ -1.36
RGD1YBR260C ESF1Q06344 628 aaKnown RBP6.53□□□□□ -1.36
RGD1YBR260C SNA3P14359 133 aa6.52□□□□□ -1.37
RGD1YBR260C DPB2P24482 689 aaPredicted RBP6.52□□□□□ -1.37
RGD1YBR260C URA1P28272 314 aaPredicted RBP6.52□□□□□ -1.37
RGD1YBR260C KIP1P28742 1111 aa6.52□□□□□ -1.37
RGD1YBR260C DBP7P36120 742 aaKnown RBP6.52□□□□□ -1.37
RGD1YBR260C MIP6P38760 659 aaKnown RBP6.52□□□□□ -1.37
RGD1YBR260C SSZ1P38788 538 aaKnown RBP6.52□□□□□ -1.37
RGD1YBR260C HGH1P48362 394 aaKnown RBP6.52□□□□□ -1.37
RGD1YBR260C MLC1P53141 149 aa6.52□□□□□ -1.37
RGD1YBR260C MDR1P53258 950 aa6.52□□□□□ -1.37
RGD1YBR260C BNI4P53858 892 aa6.52□□□□□ -1.37
RGD1YBR260C RPT6Q01939 405 aaKnown RBP6.52□□□□□ -1.37
RGD1YBR260C CWC15Q03772 175 aaKnown RBP6.52□□□□□ -1.37
RGD1YBR260C YIG1Q08956 461 aa6.52□□□□□ -1.37
RGD1YBR260C YPR089WO13585 888 aa6.52□□□□□ -1.37
RGD1YBR260C SPO11P23179 398 aa6.52□□□□□ -1.37
RGD1YBR260C NIP1P32497 812 aaKnown RBP6.52□□□□□ -1.37
RGD1YBR260C UBP13P38187 747 aa6.52□□□□□ -1.37
RGD1YBR260C FES1P38260 290 aa6.52□□□□□ -1.37
RGD1YBR260C SAK1P38990 1142 aa6.52□□□□□ -1.37
RGD1YBR260C PDS1P40316 373 aaPredicted RBP6.52□□□□□ -1.37
RGD1YBR260C SAP185P40856 1058 aa6.52□□□□□ -1.37
RGD1YBR260C URB2P47108 1174 aa6.52□□□□□ -1.37
RGD1YBR260C ECL1P48235 211 aa6.52□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms