RNA–Protein interactions for RNA: ENST00000628881.1

PFDN5-220, Transcript of prefoldin subunit 5, humanhuman

TSL 3 BASIC

Gene PFDN5, Length 231 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-220ENST00000628881 BABAM1Q9NWV8 329 aa17.92■□□□□ 0.46
PFDN5-220ENST00000628881 SNRPA1P09661 255 aaKnown RBP17.91■□□□□ 0.46
PFDN5-220ENST00000628881 TSPYL4Q9UJ04 414 aa17.91■□□□□ 0.46
PFDN5-220ENST00000628881 ZBTB1Q9Y2K1 713 aa17.91■□□□□ 0.46
PFDN5-220ENST00000628881 C4AP0C0L4 1744 aa17.91■□□□□ 0.46
PFDN5-220ENST00000628881 SOS1Q07889 1333 aaPredicted RBP17.91■□□□□ 0.46
PFDN5-220ENST00000628881 ARHGEF1Q92888 912 aaKnown RBP17.9■□□□□ 0.46
PFDN5-220ENST00000628881 PPP1R1BQ9UD71 204 aaPredicted RBP17.9■□□□□ 0.46
PFDN5-220ENST00000628881 LAMB4A4D0S4 1761 aa17.89■□□□□ 0.45
PFDN5-220ENST00000628881 POLD1P28340 1107 aa17.89■□□□□ 0.45
PFDN5-220ENST00000628881 EIF4A1P60842 406 aaKnown RBP17.89■□□□□ 0.45
PFDN5-220ENST00000628881 FAM9BQ8IZU0 186 aa17.89■□□□□ 0.45
PFDN5-220ENST00000628881 PRAMEF22A3QJZ6 481 aa17.88■□□□□ 0.45
PFDN5-220ENST00000628881 RFC4P35249 363 aa17.88■□□□□ 0.45
PFDN5-220ENST00000628881 DIEXFQ68CQ4 756 aaKnown RBP17.88■□□□□ 0.45
PFDN5-220ENST00000628881 MSL1Q68DK7 614 aa17.88■□□□□ 0.45
PFDN5-220ENST00000628881 CCER2I3L3R5 266 aa17.87■□□□□ 0.45
PFDN5-220ENST00000628881 CALD1Q05682 793 aaKnown RBP17.87■□□□□ 0.45
PFDN5-220ENST00000628881 NCBP3Q53F19 620 aaKnown RBP17.87■□□□□ 0.45
PFDN5-220ENST00000628881 USP16Q9Y5T5 823 aa17.87■□□□□ 0.45
PFDN5-220ENST00000628881 COL15A1P39059 1388 aa17.87■□□□□ 0.45
PFDN5-220ENST00000628881 CHL1O00533 1208 aa17.86■□□□□ 0.45
PFDN5-220ENST00000628881 GIGYF1O75420 1035 aaPredicted RBP17.86■□□□□ 0.45
PFDN5-220ENST00000628881 CANXP27824 592 aaKnown RBP17.86■□□□□ 0.45
PFDN5-220ENST00000628881 CCDC27Q2M243 656 aa17.86■□□□□ 0.45
PFDN5-220ENST00000628881 ARXQ96QS3 562 aa17.86■□□□□ 0.45
PFDN5-220ENST00000628881 A1BGP04217 495 aa17.85■□□□□ 0.45
PFDN5-220ENST00000628881 EIF5P55010 431 aaKnown RBP17.85■□□□□ 0.45
PFDN5-220ENST00000628881 CFAP44Q96MT7 982 aa17.85■□□□□ 0.45
PFDN5-220ENST00000628881 USP42Q9H9J4 1324 aaKnown RBP17.85■□□□□ 0.45
PFDN5-220ENST00000628881 LAS1LQ9Y4W2 734 aaKnown RBP17.85■□□□□ 0.45
PFDN5-220ENST00000628881 GYS1P13807 737 aa17.84■□□□□ 0.45
PFDN5-220ENST00000628881 IL6STP40189 918 aaPredicted RBP17.84■□□□□ 0.45
PFDN5-220ENST00000628881 NLGN1Q8N2Q7 840 aa17.83■□□□□ 0.44
PFDN5-220ENST00000628881 IFT57Q9NWB7 429 aa17.83■□□□□ 0.44
PFDN5-220ENST00000628881 SRP68Q9UHB9 627 aaKnown RBP17.83■□□□□ 0.44
PFDN5-220ENST00000628881 A0A087WZG4 1122 aa17.82■□□□□ 0.44
PFDN5-220ENST00000628881 SENP3-EIF4A1A0A087X0R7 540 aa17.82■□□□□ 0.44
PFDN5-220ENST00000628881 ZPR1O75312 459 aa17.82■□□□□ 0.44
PFDN5-220ENST00000628881 ZNF853P0CG23 659 aa17.82■□□□□ 0.44
PFDN5-220ENST00000628881 GNAI1P63096 354 aa17.82■□□□□ 0.44
PFDN5-220ENST00000628881 NARFQ9UHQ1 456 aa17.82■□□□□ 0.44
PFDN5-220ENST00000628881 WWC1Q8IX03 1113 aa17.81■□□□□ 0.44
PFDN5-220ENST00000628881 USPL1Q5W0Q7 1092 aa17.8■□□□□ 0.44
PFDN5-220ENST00000628881 NPM2Q86SE8 214 aaKnown RBP17.8■□□□□ 0.44
PFDN5-220ENST00000628881 FHDC1Q9C0D6 1143 aaPredicted RBP17.8■□□□□ 0.44
PFDN5-220ENST00000628881 MBIPQ9NS73 344 aa17.8■□□□□ 0.44
PFDN5-220ENST00000628881 ZNF330Q9Y3S2 320 aaPredicted RBP17.8■□□□□ 0.44
PFDN5-220ENST00000628881 SCN7AQ01118 1682 aa17.8■□□□□ 0.44
PFDN5-220ENST00000628881 NBPF26B4DH59 902 aa17.79■□□□□ 0.44
PFDN5-220ENST00000628881 MMP10P09238 476 aa17.79■□□□□ 0.44
PFDN5-220ENST00000628881 PIP4K2AP48426 406 aaPredicted RBP17.79■□□□□ 0.44
PFDN5-220ENST00000628881 FKBP8Q14318 412 aa17.79■□□□□ 0.44
PFDN5-220ENST00000628881 NBPF10Q6P3W6 841 aaKnown RBP17.79■□□□□ 0.44
PFDN5-220ENST00000628881 NGEFQ8N5V2 710 aa17.79■□□□□ 0.44
PFDN5-220ENST00000628881 NBPF15Q8N660 670 aa17.79■□□□□ 0.44
PFDN5-220ENST00000628881 ERBB4Q15303 1308 aa17.78■□□□□ 0.44
PFDN5-220ENST00000628881 SYT17Q9BSW7 474 aa17.78■□□□□ 0.44
PFDN5-220ENST00000628881 IL16Q14005 1332 aa17.77■□□□□ 0.44
PFDN5-220ENST00000628881 BCORQ6W2J9 1755 aa17.77■□□□□ 0.44
PFDN5-220ENST00000628881 HOXB7P09629 217 aa17.77■□□□□ 0.44
PFDN5-220ENST00000628881 KRT24Q2M2I5 525 aa17.77■□□□□ 0.44
PFDN5-220ENST00000628881 MIER1Q8N108 512 aa17.77■□□□□ 0.44
PFDN5-220ENST00000628881 BCL2L12Q9HB09 334 aa17.77■□□□□ 0.44
PFDN5-220ENST00000628881 SALL2Q9Y467 1007 aaPredicted RBP17.77■□□□□ 0.44
PFDN5-220ENST00000628881 DZIP3Q86Y13 1208 aaKnown RBP17.76■□□□□ 0.43
PFDN5-220ENST00000628881 WDR63Q8IWG1 891 aa17.76■□□□□ 0.43
PFDN5-220ENST00000628881 KLHL34Q8N239 644 aa17.76■□□□□ 0.43
PFDN5-220ENST00000628881 TBC1D2BQ9UPU7 963 aa17.76■□□□□ 0.43
PFDN5-220ENST00000628881 CAMTA2O94983 1202 aa17.75■□□□□ 0.43
PFDN5-220ENST00000628881 EIF2S2P20042 333 aaKnown RBP17.75■□□□□ 0.43
PFDN5-220ENST00000628881 PARP3Q9Y6F1 533 aa17.75■□□□□ 0.43
PFDN5-220ENST00000628881 TM4SF1P30408 202 aa17.74■□□□□ 0.43
PFDN5-220ENST00000628881 CD2APQ9Y5K6 639 aa17.74■□□□□ 0.43
PFDN5-220ENST00000628881 MYL6BP14649 208 aa17.73■□□□□ 0.43
PFDN5-220ENST00000628881 DDR1Q08345 913 aa17.73■□□□□ 0.43
PFDN5-220ENST00000628881 DUSP27Q5VZP5 1158 aa17.73■□□□□ 0.43
PFDN5-220ENST00000628881 POLRMTO00411 1230 aaKnown RBP17.72■□□□□ 0.43
PFDN5-220ENST00000628881 RGL2O15211 777 aa17.72■□□□□ 0.43
PFDN5-220ENST00000628881 NFIXQ14938 502 aa17.72■□□□□ 0.43
PFDN5-220ENST00000628881 HDGFL1Q5TGJ6 251 aa17.72■□□□□ 0.43
PFDN5-220ENST00000628881 TSR2Q969E8 191 aaKnown RBP17.72■□□□□ 0.43
PFDN5-220ENST00000628881 C10orf71Q711Q0 1435 aa17.72■□□□□ 0.43
PFDN5-220ENST00000628881 KIF13BQ9NQT8 1826 aa17.71■□□□□ 0.43
PFDN5-220ENST00000628881 PDIA6Q15084 440 aa17.71■□□□□ 0.43
PFDN5-220ENST00000628881 CLEC4GQ6UXB4 293 aa17.71■□□□□ 0.43
PFDN5-220ENST00000628881 LRP10Q7Z4F1 713 aa17.71■□□□□ 0.43
PFDN5-220ENST00000628881 NECTIN2Q92692 538 aa17.71■□□□□ 0.43
PFDN5-220ENST00000628881 ZNF652Q9Y2D9 606 aa17.71■□□□□ 0.43
PFDN5-220ENST00000628881 NRXN2Q9P2S2 1712 aa17.7■□□□□ 0.42
PFDN5-220ENST00000628881 PROSER3Q2NL68 480 aa17.7■□□□□ 0.42
PFDN5-220ENST00000628881 TBC1D9BQ66K14 1250 aa17.7■□□□□ 0.42
PFDN5-220ENST00000628881 C8orf58Q8NAV2 365 aa17.7■□□□□ 0.42
PFDN5-220ENST00000628881 NLGN2Q8NFZ4 835 aa17.7■□□□□ 0.42
PFDN5-220ENST00000628881 DDX21Q9NR30 783 aaKnown RBP eCLIP17.7■□□□□ 0.42
PFDN5-220ENST00000628881 AFDNP55196 1824 aaKnown RBP17.7■□□□□ 0.42
PFDN5-220ENST00000628881 ZNF521Q96K83 1311 aa17.7■□□□□ 0.42
PFDN5-220ENST00000628881 FANCIQ9NVI1 1328 aa17.7■□□□□ 0.42
PFDN5-220ENST00000628881 ANXA1P04083 346 aa17.69■□□□□ 0.42
PFDN5-220ENST00000628881 KIF6Q6ZMV9 814 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms