RNA–Protein interactions for RNA: ENST00000596172.1

ZNF558-204, Transcript of zinc finger protein 558, humanhuman

TSL 4

Gene ZNF558, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-204ENST00000596172 ARHGEF1Q92888 912 aaKnown RBP23.93■■□□□ 1.42
ZNF558-204ENST00000596172 EIF4A1P60842 406 aaKnown RBP23.91■■□□□ 1.42
ZNF558-204ENST00000596172 MYH14Q7Z406 1995 aaKnown RBP23.91■■□□□ 1.42
ZNF558-204ENST00000596172 SOS1Q07889 1333 aaPredicted RBP23.9■■□□□ 1.42
ZNF558-204ENST00000596172 POLD1P28340 1107 aa23.9■■□□□ 1.42
ZNF558-204ENST00000596172 PPP1R1BQ9UD71 204 aaPredicted RBP23.9■■□□□ 1.42
ZNF558-204ENST00000596172 TSPYL4Q9UJ04 414 aa23.9■■□□□ 1.42
ZNF558-204ENST00000596172 CHL1O00533 1208 aa23.89■■□□□ 1.41
ZNF558-204ENST00000596172 RFC4P35249 363 aa23.89■■□□□ 1.41
ZNF558-204ENST00000596172 ZBTB1Q9Y2K1 713 aa23.89■■□□□ 1.41
ZNF558-204ENST00000596172 USP16Q9Y5T5 823 aa23.89■■□□□ 1.41
ZNF558-204ENST00000596172 CCER2I3L3R5 266 aa23.88■■□□□ 1.41
ZNF558-204ENST00000596172 CCDC27Q2M243 656 aa23.88■■□□□ 1.41
ZNF558-204ENST00000596172 COL24A1Q17RW2 1714 aa23.87■■□□□ 1.41
ZNF558-204ENST00000596172 GIGYF1O75420 1035 aaPredicted RBP23.87■■□□□ 1.41
ZNF558-204ENST00000596172 CALD1Q05682 793 aaKnown RBP23.87■■□□□ 1.41
ZNF558-204ENST00000596172 ARXQ96QS3 562 aa23.87■■□□□ 1.41
ZNF558-204ENST00000596172 EIF5P55010 431 aaKnown RBP23.86■■□□□ 1.41
ZNF558-204ENST00000596172 DIEXFQ68CQ4 756 aaKnown RBP23.86■■□□□ 1.41
ZNF558-204ENST00000596172 CFAP44Q96MT7 982 aa23.86■■□□□ 1.41
ZNF558-204ENST00000596172 KDM3BQ7LBC6 1761 aa23.86■■□□□ 1.41
ZNF558-204ENST00000596172 PRAMEF22A3QJZ6 481 aa23.85■■□□□ 1.41
ZNF558-204ENST00000596172 CANXP27824 592 aaKnown RBP23.85■■□□□ 1.41
ZNF558-204ENST00000596172 IL6STP40189 918 aaPredicted RBP23.85■■□□□ 1.41
ZNF558-204ENST00000596172 MSL1Q68DK7 614 aa23.85■■□□□ 1.41
ZNF558-204ENST00000596172 FAM9BQ8IZU0 186 aa23.85■■□□□ 1.41
ZNF558-204ENST00000596172 NLGN1Q8N2Q7 840 aa23.85■■□□□ 1.41
ZNF558-204ENST00000596172 A1BGP04217 495 aa23.84■■□□□ 1.41
ZNF558-204ENST00000596172 ZNF853P0CG23 659 aa23.84■■□□□ 1.41
ZNF558-204ENST00000596172 USP42Q9H9J4 1324 aaKnown RBP23.84■■□□□ 1.41
ZNF558-204ENST00000596172 A0A087WZG4 1122 aa23.83■■□□□ 1.41
ZNF558-204ENST00000596172 GYS1P13807 737 aa23.83■■□□□ 1.41
ZNF558-204ENST00000596172 COL15A1P39059 1388 aa23.82■■□□□ 1.4
ZNF558-204ENST00000596172 NGEFQ8N5V2 710 aa23.82■■□□□ 1.4
ZNF558-204ENST00000596172 IFT57Q9NWB7 429 aa23.82■■□□□ 1.4
ZNF558-204ENST00000596172 NARFQ9UHQ1 456 aa23.82■■□□□ 1.4
ZNF558-204ENST00000596172 ZPR1O75312 459 aa23.81■■□□□ 1.4
ZNF558-204ENST00000596172 WWC1Q8IX03 1113 aa23.81■■□□□ 1.4
ZNF558-204ENST00000596172 LAS1LQ9Y4W2 734 aaKnown RBP23.81■■□□□ 1.4
ZNF558-204ENST00000596172 GNAI1P63096 354 aa23.8■■□□□ 1.4
ZNF558-204ENST00000596172 SRP68Q9UHB9 627 aaKnown RBP23.8■■□□□ 1.4
ZNF558-204ENST00000596172 NBPF26B4DH59 902 aa23.78■■□□□ 1.4
ZNF558-204ENST00000596172 NBPF10Q6P3W6 841 aaKnown RBP23.78■■□□□ 1.4
ZNF558-204ENST00000596172 NPM2Q86SE8 214 aaKnown RBP23.78■■□□□ 1.4
ZNF558-204ENST00000596172 NBPF15Q8N660 670 aa23.78■■□□□ 1.4
ZNF558-204ENST00000596172 FHDC1Q9C0D6 1143 aaPredicted RBP23.78■■□□□ 1.4
ZNF558-204ENST00000596172 USPL1Q5W0Q7 1092 aa23.77■■□□□ 1.4
ZNF558-204ENST00000596172 SYT17Q9BSW7 474 aa23.77■■□□□ 1.4
ZNF558-204ENST00000596172 MBIPQ9NS73 344 aa23.77■■□□□ 1.4
ZNF558-204ENST00000596172 ERBB4Q15303 1308 aa23.77■■□□□ 1.4
ZNF558-204ENST00000596172 MMP10P09238 476 aa23.76■■□□□ 1.39
ZNF558-204ENST00000596172 FKBP8Q14318 412 aa23.76■■□□□ 1.39
ZNF558-204ENST00000596172 IL16Q14005 1332 aa23.76■■□□□ 1.39
ZNF558-204ENST00000596172 HOXB7P09629 217 aa23.75■■□□□ 1.39
ZNF558-204ENST00000596172 C4AP0C0L4 1744 aa23.75■■□□□ 1.39
ZNF558-204ENST00000596172 TM4SF1P30408 202 aa23.74■■□□□ 1.39
ZNF558-204ENST00000596172 WDR63Q8IWG1 891 aa23.74■■□□□ 1.39
ZNF558-204ENST00000596172 BCL2L12Q9HB09 334 aa23.74■■□□□ 1.39
ZNF558-204ENST00000596172 RGL2O15211 777 aa23.73■■□□□ 1.39
ZNF558-204ENST00000596172 PIP4K2AP48426 406 aaPredicted RBP23.73■■□□□ 1.39
ZNF558-204ENST00000596172 TBC1D2BQ9UPU7 963 aa23.73■■□□□ 1.39
ZNF558-204ENST00000596172 ZNF330Q9Y3S2 320 aaPredicted RBP23.73■■□□□ 1.39
ZNF558-204ENST00000596172 CD2APQ9Y5K6 639 aa23.73■■□□□ 1.39
ZNF558-204ENST00000596172 MIER1Q8N108 512 aa23.72■■□□□ 1.39
ZNF558-204ENST00000596172 SENP3-EIF4A1A0A087X0R7 540 aa23.71■■□□□ 1.39
ZNF558-204ENST00000596172 CAMTA2O94983 1202 aa23.71■■□□□ 1.39
ZNF558-204ENST00000596172 KRT24Q2M2I5 525 aa23.71■■□□□ 1.39
ZNF558-204ENST00000596172 DZIP3Q86Y13 1208 aaKnown RBP23.71■■□□□ 1.39
ZNF558-204ENST00000596172 PARP3Q9Y6F1 533 aa23.71■■□□□ 1.39
ZNF558-204ENST00000596172 LAMB4A4D0S4 1761 aa23.7■■□□□ 1.39
ZNF558-204ENST00000596172 EIF2S2P20042 333 aaKnown RBP23.7■■□□□ 1.38
ZNF558-204ENST00000596172 CLEC4GQ6UXB4 293 aa23.7■■□□□ 1.38
ZNF558-204ENST00000596172 PDIA6Q15084 440 aa23.69■■□□□ 1.38
ZNF558-204ENST00000596172 DDR1Q08345 913 aa23.68■■□□□ 1.38
ZNF558-204ENST00000596172 NFIXQ14938 502 aa23.68■■□□□ 1.38
ZNF558-204ENST00000596172 DUSP27Q5VZP5 1158 aa23.68■■□□□ 1.38
ZNF558-204ENST00000596172 SALL2Q9Y467 1007 aaPredicted RBP23.68■■□□□ 1.38
ZNF558-204ENST00000596172 POLRMTO00411 1230 aaKnown RBP23.67■■□□□ 1.38
ZNF558-204ENST00000596172 LRP10Q7Z4F1 713 aa23.67■■□□□ 1.38
ZNF558-204ENST00000596172 ERVV-1B6SEH8 477 aa23.66■■□□□ 1.38
ZNF558-204ENST00000596172 KLHL34Q8N239 644 aa23.66■■□□□ 1.38
ZNF558-204ENST00000596172 CHMP4AQ9BY43 222 aa23.66■■□□□ 1.38
ZNF558-204ENST00000596172 DDX21Q9NR30 783 aaKnown RBP eCLIP23.66■■□□□ 1.38
ZNF558-204ENST00000596172 MYL6BP14649 208 aa23.65■■□□□ 1.38
ZNF558-204ENST00000596172 HDGFL1Q5TGJ6 251 aa23.65■■□□□ 1.38
ZNF558-204ENST00000596172 ZNF652Q9Y2D9 606 aa23.65■■□□□ 1.38
ZNF558-204ENST00000596172 ZNF521Q96K83 1311 aa23.64■■□□□ 1.38
ZNF558-204ENST00000596172 TBC1D9BQ66K14 1250 aa23.64■■□□□ 1.37
ZNF558-204ENST00000596172 C8orf58Q8NAV2 365 aa23.64■■□□□ 1.37
ZNF558-204ENST00000596172 NLGN2Q8NFZ4 835 aa23.63■■□□□ 1.37
ZNF558-204ENST00000596172 TSR2Q969E8 191 aaKnown RBP23.63■■□□□ 1.37
ZNF558-204ENST00000596172 MAP3K15Q6ZN16 1313 aa23.62■■□□□ 1.37
ZNF558-204ENST00000596172 PROSER3Q2NL68 480 aa23.62■■□□□ 1.37
ZNF558-204ENST00000596172 NECTIN2Q92692 538 aa23.62■■□□□ 1.37
ZNF558-204ENST00000596172 DBF4Q9UBU7 674 aaPredicted RBP23.62■■□□□ 1.37
ZNF558-204ENST00000596172 SCN7AQ01118 1682 aa23.61■■□□□ 1.37
ZNF558-204ENST00000596172 C10orf71Q711Q0 1435 aa23.61■■□□□ 1.37
ZNF558-204ENST00000596172 SERPINB2P05120 415 aa23.61■■□□□ 1.37
ZNF558-204ENST00000596172 TGFB2P61812 414 aa23.61■■□□□ 1.37
ZNF558-204ENST00000596172 KIF6Q6ZMV9 814 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms