RNA–Protein interactions for RNA: ENST00000585371.1

CHAF1A-202, Transcript of chromatin assembly factor 1 subunit A, humanhuman

TSL 5

Gene CHAF1A, Length 884 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-202ENST00000585371 LINC00116Q8NCU8 138 aa17.42■□□□□ 0.38
CHAF1A-202ENST00000585371 IFT57Q9NWB7 429 aa17.42■□□□□ 0.38
CHAF1A-202ENST00000585371 IL16Q14005 1332 aa17.42■□□□□ 0.38
CHAF1A-202ENST00000585371 TTC5Q8N0Z6 440 aa17.41■□□□□ 0.38
CHAF1A-202ENST00000585371 VSIG10Q8N0Z9 540 aa17.41■□□□□ 0.38
CHAF1A-202ENST00000585371 SPINK5Q9NQ38 1064 aaPredicted RBP17.41■□□□□ 0.38
CHAF1A-202ENST00000585371 TSPYL4Q9UJ04 414 aa17.41■□□□□ 0.38
CHAF1A-202ENST00000585371 CALD1Q05682 793 aaKnown RBP17.4■□□□□ 0.38
CHAF1A-202ENST00000585371 GPR162Q16538 588 aa17.4■□□□□ 0.38
CHAF1A-202ENST00000585371 DNAJC10Q8IXB1 793 aa17.4■□□□□ 0.38
CHAF1A-202ENST00000585371 FMNL2Q96PY5 1086 aa17.4■□□□□ 0.38
CHAF1A-202ENST00000585371 MBIPQ9NS73 344 aa17.4■□□□□ 0.38
CHAF1A-202ENST00000585371 PRAMEF22A3QJZ6 481 aa17.39■□□□□ 0.37
CHAF1A-202ENST00000585371 GNAI1P63096 354 aa17.39■□□□□ 0.37
CHAF1A-202ENST00000585371 KLHL34Q8N239 644 aa17.39■□□□□ 0.37
CHAF1A-202ENST00000585371 LAS1LQ9Y4W2 734 aaKnown RBP17.39■□□□□ 0.37
CHAF1A-202ENST00000585371 GIGYF1O75420 1035 aaPredicted RBP17.37■□□□□ 0.37
CHAF1A-202ENST00000585371 CYP19A1P11511 503 aaPredicted RBP17.37■□□□□ 0.37
CHAF1A-202ENST00000585371 KRT24Q2M2I5 525 aa17.37■□□□□ 0.37
CHAF1A-202ENST00000585371 USP16Q9Y5T5 823 aa17.37■□□□□ 0.37
CHAF1A-202ENST00000585371 CNTNAP4Q9C0A0 1308 aa17.37■□□□□ 0.37
CHAF1A-202ENST00000585371 MSH5O43196 834 aa17.36■□□□□ 0.37
CHAF1A-202ENST00000585371 AMIGO3Q86WK7 504 aa17.36■□□□□ 0.37
CHAF1A-202ENST00000585371 FLAD1Q8NFF5 587 aa17.36■□□□□ 0.37
CHAF1A-202ENST00000585371 TSR2Q969E8 191 aaKnown RBP17.36■□□□□ 0.37
CHAF1A-202ENST00000585371 C4AP0C0L4 1744 aa17.35■□□□□ 0.37
CHAF1A-202ENST00000585371 SNRPA1P09661 255 aaKnown RBP17.35■□□□□ 0.37
CHAF1A-202ENST00000585371 HNRNPUQ00839 825 aaKnown RBP eCLIP17.35■□□□□ 0.37
CHAF1A-202ENST00000585371 RC3H1Q5TC82 1133 aaKnown RBP17.35■□□□□ 0.37
CHAF1A-202ENST00000585371 INTS5Q6P9B9 1019 aaKnown RBP17.35■□□□□ 0.37
CHAF1A-202ENST00000585371 COL23A1Q86Y22 540 aaPredicted RBP17.35■□□□□ 0.37
CHAF1A-202ENST00000585371 CRKLP46109 303 aaKnown RBP17.34■□□□□ 0.37
CHAF1A-202ENST00000585371 FANCIQ9NVI1 1328 aa17.34■□□□□ 0.37
CHAF1A-202ENST00000585371 GOLGA2Q08379 1002 aa17.33■□□□□ 0.36
CHAF1A-202ENST00000585371 SLFN5Q08AF3 891 aa17.33■□□□□ 0.36
CHAF1A-202ENST00000585371 TRMT2AQ8IZ69 625 aaKnown RBP17.33■□□□□ 0.36
CHAF1A-202ENST00000585371 PELP1Q8IZL8 1130 aaKnown RBP17.33■□□□□ 0.36
CHAF1A-202ENST00000585371 CDCA7LQ96GN5 454 aa17.33■□□□□ 0.36
CHAF1A-202ENST00000585371 TEX13AQ9BXU3 409 aaPredicted RBP17.33■□□□□ 0.36
CHAF1A-202ENST00000585371 SMIM5Q71RC9 77 aa17.32■□□□□ 0.36
CHAF1A-202ENST00000585371 C8orf58Q8NAV2 365 aa17.32■□□□□ 0.36
CHAF1A-202ENST00000585371 NLGN2Q8NFZ4 835 aa17.32■□□□□ 0.36
CHAF1A-202ENST00000585371 GRIN3BO60391 1043 aa17.31■□□□□ 0.36
CHAF1A-202ENST00000585371 RPS6KA4O75676 772 aa17.31■□□□□ 0.36
CHAF1A-202ENST00000585371 A1BGP04217 495 aa17.31■□□□□ 0.36
CHAF1A-202ENST00000585371 TSPYL6Q8N831 410 aa17.31■□□□□ 0.36
CHAF1A-202ENST00000585371 CCDC87Q9NVE4 849 aa17.31■□□□□ 0.36
CHAF1A-202ENST00000585371 ZBTB1Q9Y2K1 713 aa17.31■□□□□ 0.36
CHAF1A-202ENST00000585371 ZBED9Q6R2W3 1325 aa17.3■□□□□ 0.36
CHAF1A-202ENST00000585371 NBPF26B4DH59 902 aa17.3■□□□□ 0.36
CHAF1A-202ENST00000585371 STARD3NLO95772 234 aa17.3■□□□□ 0.36
CHAF1A-202ENST00000585371 DUSP27Q5VZP5 1158 aa17.3■□□□□ 0.36
CHAF1A-202ENST00000585371 NBPF10Q6P3W6 841 aaKnown RBP17.3■□□□□ 0.36
CHAF1A-202ENST00000585371 NBPF15Q8N660 670 aa17.3■□□□□ 0.36
CHAF1A-202ENST00000585371 SOS1Q07889 1333 aaPredicted RBP17.29■□□□□ 0.36
CHAF1A-202ENST00000585371 E9PSI1 815 aa17.29■□□□□ 0.36
CHAF1A-202ENST00000585371 GNPATO15228 680 aa17.29■□□□□ 0.36
CHAF1A-202ENST00000585371 HOXB7P09629 217 aa17.29■□□□□ 0.36
CHAF1A-202ENST00000585371 MSL1Q68DK7 614 aa17.29■□□□□ 0.36
CHAF1A-202ENST00000585371 AK7Q96M32 723 aa17.29■□□□□ 0.36
CHAF1A-202ENST00000585371 CACNA1FO60840 1977 aa17.28■□□□□ 0.36
CHAF1A-202ENST00000585371 PDIA6Q15084 440 aa17.28■□□□□ 0.36
CHAF1A-202ENST00000585371 LRP10Q7Z4F1 713 aa17.28■□□□□ 0.36
CHAF1A-202ENST00000585371 MYH16Q9H6N6 1097 aa17.28■□□□□ 0.36
CHAF1A-202ENST00000585371 CD2APQ9Y5K6 639 aa17.28■□□□□ 0.36
CHAF1A-202ENST00000585371 UTRNP46939 3433 aa17.28■□□□□ 0.36
CHAF1A-202ENST00000585371 BCORQ6W2J9 1755 aa17.28■□□□□ 0.36
CHAF1A-202ENST00000585371 ELL2O00472 640 aaPredicted RBP17.27■□□□□ 0.36
CHAF1A-202ENST00000585371 SSFA2P28290 1259 aa17.27■□□□□ 0.36
CHAF1A-202ENST00000585371 PIP4K2AP48426 406 aaPredicted RBP17.27■□□□□ 0.36
CHAF1A-202ENST00000585371 EIF5P55010 431 aaKnown RBP17.27■□□□□ 0.36
CHAF1A-202ENST00000585371 C1QTNF8P60827 252 aa17.27■□□□□ 0.36
CHAF1A-202ENST00000585371 EXOSC9Q06265 439 aaKnown RBP17.27■□□□□ 0.36
CHAF1A-202ENST00000585371 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.26■□□□□ 0.35
CHAF1A-202ENST00000585371 RTCBQ9Y3I0 505 aaKnown RBP17.26■□□□□ 0.35
CHAF1A-202ENST00000585371 SCN7AQ01118 1682 aa17.26■□□□□ 0.35
CHAF1A-202ENST00000585371 VAMP4O75379 141 aa17.25■□□□□ 0.35
CHAF1A-202ENST00000585371 YBX3P16989 372 aaKnown RBP eCLIP17.25■□□□□ 0.35
CHAF1A-202ENST00000585371 EIF2S2P20042 333 aaKnown RBP17.25■□□□□ 0.35
CHAF1A-202ENST00000585371 CANXP27824 592 aaKnown RBP17.25■□□□□ 0.35
CHAF1A-202ENST00000585371 IL6STP40189 918 aaPredicted RBP17.25■□□□□ 0.35
CHAF1A-202ENST00000585371 COL15A1P39059 1388 aa17.25■□□□□ 0.35
CHAF1A-202ENST00000585371 ERBB4Q15303 1308 aa17.24■□□□□ 0.35
CHAF1A-202ENST00000585371 PHF14O94880 888 aa17.24■□□□□ 0.35
CHAF1A-202ENST00000585371 PROSER3Q2NL68 480 aa17.24■□□□□ 0.35
CHAF1A-202ENST00000585371 TWISTNBQ3B726 338 aaPredicted RBP17.24■□□□□ 0.35
CHAF1A-202ENST00000585371 ARHGEF1Q92888 912 aaKnown RBP17.24■□□□□ 0.35
CHAF1A-202ENST00000585371 ADRA2BP18089 450 aa17.23■□□□□ 0.35
CHAF1A-202ENST00000585371 HDGFL1Q5TGJ6 251 aa17.23■□□□□ 0.35
CHAF1A-202ENST00000585371 NECTIN2Q92692 538 aa17.23■□□□□ 0.35
CHAF1A-202ENST00000585371 NUP98P52948 1817 aa17.22■□□□□ 0.35
CHAF1A-202ENST00000585371 ANXA1P04083 346 aa17.22■□□□□ 0.35
CHAF1A-202ENST00000585371 TRAPPC3LQ5T215 181 aa17.22■□□□□ 0.35
CHAF1A-202ENST00000585371 DDX21Q9NR30 783 aaKnown RBP eCLIP17.21■□□□□ 0.35
CHAF1A-202ENST00000585371 CHPF2Q9P2E5 772 aa17.21■□□□□ 0.35
CHAF1A-202ENST00000585371 USP42Q9H9J4 1324 aaKnown RBP17.21■□□□□ 0.34
CHAF1A-202ENST00000585371 MYL6BP14649 208 aa17.2■□□□□ 0.34
CHAF1A-202ENST00000585371 BCL2L12Q9HB09 334 aa17.2■□□□□ 0.34
CHAF1A-202ENST00000585371 SRP68Q9UHB9 627 aaKnown RBP17.2■□□□□ 0.34
CHAF1A-202ENST00000585371 NARFQ9UHQ1 456 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms