RNA–Protein interactions for RNA: ENST00000584397.1

ARHGDIA-216, Transcript of Rho GDP dissociation inhibitor alpha, humanhuman

TSL 2

Gene ARHGDIA, Length 622 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGDIA-216ENST00000584397 TRAPPC3LQ5T215 181 aa32.56■■■□□ 2.8
ARHGDIA-216ENST00000584397 SNRPA1P09661 255 aaKnown RBP32.55■■■□□ 2.8
ARHGDIA-216ENST00000584397 MSH5O43196 834 aa32.54■■■□□ 2.8
ARHGDIA-216ENST00000584397 EIF4A1P60842 406 aaKnown RBP32.54■■■□□ 2.8
ARHGDIA-216ENST00000584397 ARHGEF1Q92888 912 aaKnown RBP32.54■■■□□ 2.8
ARHGDIA-216ENST00000584397 SOS1Q07889 1333 aaPredicted RBP32.53■■■□□ 2.8
ARHGDIA-216ENST00000584397 ZBTB1Q9Y2K1 713 aa32.53■■■□□ 2.8
ARHGDIA-216ENST00000584397 CHL1O00533 1208 aa32.52■■■□□ 2.8
ARHGDIA-216ENST00000584397 CCER2I3L3R5 266 aa32.51■■■□□ 2.79
ARHGDIA-216ENST00000584397 USP16Q9Y5T5 823 aa32.51■■■□□ 2.79
ARHGDIA-216ENST00000584397 PRAMEF22A3QJZ6 481 aa32.5■■■□□ 2.79
ARHGDIA-216ENST00000584397 CCDC27Q2M243 656 aa32.5■■■□□ 2.79
ARHGDIA-216ENST00000584397 TSPYL4Q9UJ04 414 aa32.5■■■□□ 2.79
ARHGDIA-216ENST00000584397 GIGYF1O75420 1035 aaPredicted RBP32.49■■■□□ 2.79
ARHGDIA-216ENST00000584397 DIEXFQ68CQ4 756 aaKnown RBP32.48■■■□□ 2.79
ARHGDIA-216ENST00000584397 ZNF853P0CG23 659 aa32.47■■■□□ 2.79
ARHGDIA-216ENST00000584397 EIF5P55010 431 aaKnown RBP32.47■■■□□ 2.79
ARHGDIA-216ENST00000584397 RFC4P35249 363 aa32.46■■■□□ 2.79
ARHGDIA-216ENST00000584397 CFAP44Q96MT7 982 aa32.46■■■□□ 2.79
ARHGDIA-216ENST00000584397 A1BGP04217 495 aa32.45■■■□□ 2.79
ARHGDIA-216ENST00000584397 FAM9BQ8IZU0 186 aa32.45■■■□□ 2.79
ARHGDIA-216ENST00000584397 C4AP0C0L4 1744 aa32.45■■■□□ 2.78
ARHGDIA-216ENST00000584397 POLD1P28340 1107 aa32.44■■■□□ 2.78
ARHGDIA-216ENST00000584397 CALD1Q05682 793 aaKnown RBP32.44■■■□□ 2.78
ARHGDIA-216ENST00000584397 MSL1Q68DK7 614 aa32.44■■■□□ 2.78
ARHGDIA-216ENST00000584397 ARXQ96QS3 562 aa32.44■■■□□ 2.78
ARHGDIA-216ENST00000584397 USP42Q9H9J4 1324 aaKnown RBP32.44■■■□□ 2.78
ARHGDIA-216ENST00000584397 GYS1P13807 737 aa32.43■■■□□ 2.78
ARHGDIA-216ENST00000584397 CANXP27824 592 aaKnown RBP32.43■■■□□ 2.78
ARHGDIA-216ENST00000584397 IL6STP40189 918 aaPredicted RBP32.43■■■□□ 2.78
ARHGDIA-216ENST00000584397 COL15A1P39059 1388 aa32.43■■■□□ 2.78
ARHGDIA-216ENST00000584397 PPP1R1BQ9UD71 204 aaPredicted RBP32.42■■■□□ 2.78
ARHGDIA-216ENST00000584397 WWC1Q8IX03 1113 aa32.41■■■□□ 2.78
ARHGDIA-216ENST00000584397 NLGN1Q8N2Q7 840 aa32.41■■■□□ 2.78
ARHGDIA-216ENST00000584397 IFT57Q9NWB7 429 aa32.41■■■□□ 2.78
ARHGDIA-216ENST00000584397 SRP68Q9UHB9 627 aaKnown RBP32.39■■■□□ 2.78
ARHGDIA-216ENST00000584397 NARFQ9UHQ1 456 aa32.39■■■□□ 2.78
ARHGDIA-216ENST00000584397 LAMB4A4D0S4 1761 aa32.38■■■□□ 2.77
ARHGDIA-216ENST00000584397 NBPF26B4DH59 902 aa32.38■■■□□ 2.77
ARHGDIA-216ENST00000584397 NBPF10Q6P3W6 841 aaKnown RBP32.38■■■□□ 2.77
ARHGDIA-216ENST00000584397 NGEFQ8N5V2 710 aa32.38■■■□□ 2.77
ARHGDIA-216ENST00000584397 NBPF15Q8N660 670 aa32.38■■■□□ 2.77
ARHGDIA-216ENST00000584397 A0A087WZG4 1122 aa32.37■■■□□ 2.77
ARHGDIA-216ENST00000584397 MBIPQ9NS73 344 aa32.37■■■□□ 2.77
ARHGDIA-216ENST00000584397 GNAI1P63096 354 aa32.36■■■□□ 2.77
ARHGDIA-216ENST00000584397 LAS1LQ9Y4W2 734 aaKnown RBP32.36■■■□□ 2.77
ARHGDIA-216ENST00000584397 IL16Q14005 1332 aa32.34■■■□□ 2.77
ARHGDIA-216ENST00000584397 ZPR1O75312 459 aa32.34■■■□□ 2.77
ARHGDIA-216ENST00000584397 FHDC1Q9C0D6 1143 aaPredicted RBP32.34■■■□□ 2.77
ARHGDIA-216ENST00000584397 BCL2L12Q9HB09 334 aa32.34■■■□□ 2.77
ARHGDIA-216ENST00000584397 SENP3-EIF4A1A0A087X0R7 540 aa32.33■■■□□ 2.77
ARHGDIA-216ENST00000584397 FKBP8Q14318 412 aa32.33■■■□□ 2.77
ARHGDIA-216ENST00000584397 USPL1Q5W0Q7 1092 aa32.33■■■□□ 2.77
ARHGDIA-216ENST00000584397 MIER1Q8N108 512 aa32.33■■■□□ 2.77
ARHGDIA-216ENST00000584397 ERBB4Q15303 1308 aa32.32■■■□□ 2.76
ARHGDIA-216ENST00000584397 MMP10P09238 476 aa32.32■■■□□ 2.76
ARHGDIA-216ENST00000584397 HOXB7P09629 217 aa32.31■■■□□ 2.76
ARHGDIA-216ENST00000584397 PIP4K2AP48426 406 aaPredicted RBP32.31■■■□□ 2.76
ARHGDIA-216ENST00000584397 KRT24Q2M2I5 525 aa32.31■■■□□ 2.76
ARHGDIA-216ENST00000584397 SYT17Q9BSW7 474 aa32.31■■■□□ 2.76
ARHGDIA-216ENST00000584397 WDR63Q8IWG1 891 aa32.3■■■□□ 2.76
ARHGDIA-216ENST00000584397 TM4SF1P30408 202 aa32.29■■■□□ 2.76
ARHGDIA-216ENST00000584397 CAMTA2O94983 1202 aa32.27■■■□□ 2.76
ARHGDIA-216ENST00000584397 PDIA6Q15084 440 aa32.27■■■□□ 2.76
ARHGDIA-216ENST00000584397 LRP10Q7Z4F1 713 aa32.27■■■□□ 2.76
ARHGDIA-216ENST00000584397 TBC1D2BQ9UPU7 963 aa32.27■■■□□ 2.76
ARHGDIA-216ENST00000584397 RGL2O15211 777 aa32.26■■■□□ 2.75
ARHGDIA-216ENST00000584397 DZIP3Q86Y13 1208 aaKnown RBP32.25■■■□□ 2.75
ARHGDIA-216ENST00000584397 ZNF330Q9Y3S2 320 aaPredicted RBP32.25■■■□□ 2.75
ARHGDIA-216ENST00000584397 CD2APQ9Y5K6 639 aa32.25■■■□□ 2.75
ARHGDIA-216ENST00000584397 ZNF521Q96K83 1311 aa32.25■■■□□ 2.75
ARHGDIA-216ENST00000584397 DDR1Q08345 913 aa32.24■■■□□ 2.75
ARHGDIA-216ENST00000584397 NPM2Q86SE8 214 aaKnown RBP32.24■■■□□ 2.75
ARHGDIA-216ENST00000584397 SCN7AQ01118 1682 aa32.24■■■□□ 2.75
ARHGDIA-216ENST00000584397 EIF2S2P20042 333 aaKnown RBP32.23■■■□□ 2.75
ARHGDIA-216ENST00000584397 NFIXQ14938 502 aa32.23■■■□□ 2.75
ARHGDIA-216ENST00000584397 DUSP27Q5VZP5 1158 aa32.23■■■□□ 2.75
ARHGDIA-216ENST00000584397 SALL2Q9Y467 1007 aaPredicted RBP32.23■■■□□ 2.75
ARHGDIA-216ENST00000584397 POLRMTO00411 1230 aaKnown RBP32.21■■■□□ 2.75
ARHGDIA-216ENST00000584397 CLEC4GQ6UXB4 293 aa32.21■■■□□ 2.75
ARHGDIA-216ENST00000584397 C8orf58Q8NAV2 365 aa32.2■■■□□ 2.75
ARHGDIA-216ENST00000584397 PARP3Q9Y6F1 533 aa32.2■■■□□ 2.75
ARHGDIA-216ENST00000584397 TSR2Q969E8 191 aaKnown RBP32.19■■■□□ 2.74
ARHGDIA-216ENST00000584397 BCORQ6W2J9 1755 aa32.19■■■□□ 2.74
ARHGDIA-216ENST00000584397 PROSER3Q2NL68 480 aa32.18■■■□□ 2.74
ARHGDIA-216ENST00000584397 DDX21Q9NR30 783 aaKnown RBP eCLIP32.18■■■□□ 2.74
ARHGDIA-216ENST00000584397 MYL6BP14649 208 aa32.17■■■□□ 2.74
ARHGDIA-216ENST00000584397 C10orf71Q711Q0 1435 aa32.17■■■□□ 2.74
ARHGDIA-216ENST00000584397 ERVV-1B6SEH8 477 aa32.16■■■□□ 2.74
ARHGDIA-216ENST00000584397 HDGFL1Q5TGJ6 251 aa32.16■■■□□ 2.74
ARHGDIA-216ENST00000584397 TBC1D9BQ66K14 1250 aa32.16■■■□□ 2.74
ARHGDIA-216ENST00000584397 SPINK5Q9NQ38 1064 aaPredicted RBP32.16■■■□□ 2.74
ARHGDIA-216ENST00000584397 TTLL7Q6ZT98 887 aa32.15■■■□□ 2.74
ARHGDIA-216ENST00000584397 NLGN2Q8NFZ4 835 aa32.15■■■□□ 2.74
ARHGDIA-216ENST00000584397 KIF13BQ9NQT8 1826 aa32.14■■■□□ 2.74
ARHGDIA-216ENST00000584397 FANCIQ9NVI1 1328 aa32.14■■■□□ 2.74
ARHGDIA-216ENST00000584397 MAP3K15Q6ZN16 1313 aa32.13■■■□□ 2.73
ARHGDIA-216ENST00000584397 KLHL34Q8N239 644 aa32.13■■■□□ 2.73
ARHGDIA-216ENST00000584397 TSPYL6Q8N831 410 aa32.13■■■□□ 2.73
ARHGDIA-216ENST00000584397 NECTIN2Q92692 538 aa32.13■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms