RNA–Protein interactions for RNA: ENST00000563573.5

CDR2-203, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-203ENST00000563573 COG6Q9Y2V7 657 aa7.39□□□□□ -1.23
CDR2-203ENST00000563573 TDRD9Q8NDG6 1382 aaKnown RBP7.38□□□□□ -1.23
CDR2-203ENST00000563573 PHF20L1A8MW92 1017 aa7.38□□□□□ -1.23
CDR2-203ENST00000563573 GDF10P55107 478 aa7.38□□□□□ -1.23
CDR2-203ENST00000563573 NFATC2IPQ8NCF5 419 aa7.38□□□□□ -1.23
CDR2-203ENST00000563573 NIFKQ9BYG3 293 aaKnown RBP7.38□□□□□ -1.23
CDR2-203ENST00000563573 GPAMQ9HCL2 828 aa7.38□□□□□ -1.23
CDR2-203ENST00000563573 GAPVD1Q14C86 1478 aa7.37□□□□□ -1.23
CDR2-203ENST00000563573 LOC105371045A0A1W2PR82 267 aa7.37□□□□□ -1.23
CDR2-203ENST00000563573 MSX1P28360 303 aa7.37□□□□□ -1.23
CDR2-203ENST00000563573 IRS1P35568 1242 aa7.37□□□□□ -1.23
CDR2-203ENST00000563573 EML3Q32P44 896 aa7.37□□□□□ -1.23
CDR2-203ENST00000563573 FIGNL1Q6PIW4 674 aa7.37□□□□□ -1.23
CDR2-203ENST00000563573 TBC1D9Q6ZT07 1266 aa7.37□□□□□ -1.23
CDR2-203ENST00000563573 PODNQ7Z5L7 613 aa7.37□□□□□ -1.23
CDR2-203ENST00000563573 BEND7Q8N7W2 519 aaPredicted RBP7.37□□□□□ -1.23
CDR2-203ENST00000563573 NEDD1Q8NHV4 660 aa7.37□□□□□ -1.23
CDR2-203ENST00000563573 ATXN7L1Q9ULK2 861 aaPredicted RBP7.37□□□□□ -1.23
CDR2-203ENST00000563573 PBRM1Q86U86 1689 aa7.36□□□□□ -1.23
CDR2-203ENST00000563573 BACH1O14867 736 aa7.36□□□□□ -1.23
CDR2-203ENST00000563573 UBTFP17480 764 aaKnown RBP7.36□□□□□ -1.23
CDR2-203ENST00000563573 SCNN1DP51172 638 aa7.36□□□□□ -1.23
CDR2-203ENST00000563573 SMTNP53814 917 aa7.36□□□□□ -1.23
CDR2-203ENST00000563573 FOXK2Q01167 660 aa7.36□□□□□ -1.23
CDR2-203ENST00000563573 KCTD17Q8N5Z5 321 aa7.36□□□□□ -1.23
CDR2-203ENST00000563573 CRISPLD1Q9H336 500 aa7.36□□□□□ -1.23
CDR2-203ENST00000563573 GDF2Q9UK05 429 aaPredicted RBP7.36□□□□□ -1.23
CDR2-203ENST00000563573 NOD1Q9Y239 953 aa7.36□□□□□ -1.23
CDR2-203ENST00000563573 DNMT3AQ9Y6K1 912 aaPredicted RBP7.36□□□□□ -1.23
CDR2-203ENST00000563573 ABCA5Q8WWZ7 1642 aa7.36□□□□□ -1.23
CDR2-203ENST00000563573 ACDQ96AP0 544 aa7.35□□□□□ -1.23
CDR2-203ENST00000563573 SLC4A9Q96Q91 983 aa7.35□□□□□ -1.23
CDR2-203ENST00000563573 OXCT2Q9BYC2 517 aaPredicted RBP7.35□□□□□ -1.23
CDR2-203ENST00000563573 ALG2Q9H553 416 aa7.35□□□□□ -1.23
CDR2-203ENST00000563573 ERICH3Q5RHP9 1530 aa7.35□□□□□ -1.23
CDR2-203ENST00000563573 AQRO60306 1485 aaKnown RBP eCLIP7.35□□□□□ -1.231e-6■■■□□ 19
CDR2-203ENST00000563573 CUL7Q14999 1698 aa7.35□□□□□ -1.23
CDR2-203ENST00000563573 CARMIL1Q5VZK9 1371 aa7.34□□□□□ -1.23
CDR2-203ENST00000563573 CDK2AP1O14519 115 aa7.34□□□□□ -1.23
CDR2-203ENST00000563573 OIP5O43482 229 aa7.34□□□□□ -1.23
CDR2-203ENST00000563573 IGHA1P01876 353 aa7.34□□□□□ -1.23
CDR2-203ENST00000563573 SKIP12755 728 aa7.34□□□□□ -1.23
CDR2-203ENST00000563573 PLA2G4AP47712 749 aa7.34□□□□□ -1.23
CDR2-203ENST00000563573 NBPF1Q3BBV0 1214 aa7.34□□□□□ -1.23
CDR2-203ENST00000563573 NLRP8Q86W28 1048 aa7.34□□□□□ -1.23
CDR2-203ENST00000563573 RUBCNLQ9H714 662 aa7.34□□□□□ -1.23
CDR2-203ENST00000563573 GRIN2BQ13224 1484 aa7.34□□□□□ -1.23
CDR2-203ENST00000563573 KIF21BO75037 1637 aa7.34□□□□□ -1.24
CDR2-203ENST00000563573 ZNF608Q9ULD9 1512 aaPredicted RBP7.33□□□□□ -1.24
CDR2-203ENST00000563573 EIF4G3O43432 1585 aaKnown RBP7.33□□□□□ -1.24
CDR2-203ENST00000563573 GOLGA3Q08378 1498 aa7.32□□□□□ -1.24
CDR2-203ENST00000563573 RAPGEF2Q9Y4G8 1499 aa7.32□□□□□ -1.24
CDR2-203ENST00000563573 A6NJY4 79 aa7.32□□□□□ -1.24
CDR2-203ENST00000563573 STAU1O95793 577 aaKnown RBP7.32□□□□□ -1.24
CDR2-203ENST00000563573 THBS1P07996 1170 aa7.32□□□□□ -1.24
CDR2-203ENST00000563573 TATP17735 454 aaPredicted RBP7.32□□□□□ -1.24
CDR2-203ENST00000563573 UBAP2LQ14157 1087 aaKnown RBP7.32□□□□□ -1.24
CDR2-203ENST00000563573 MTFR1Q15390 333 aa7.32□□□□□ -1.24
CDR2-203ENST00000563573 GOLGA6L1Q8N7Z2 621 aa7.32□□□□□ -1.24
CDR2-203ENST00000563573 AIDAQ96BJ3 306 aa7.32□□□□□ -1.24
CDR2-203ENST00000563573 KLRG1Q96E93 195 aa7.32□□□□□ -1.24
CDR2-203ENST00000563573 ZDHHC3Q9NYG2 299 aa7.32□□□□□ -1.24
CDR2-203ENST00000563573 PCDHGC4Q9Y5F7 938 aa7.32□□□□□ -1.24
CDR2-203ENST00000563573 PCDHGA11Q9Y5H2 935 aa7.32□□□□□ -1.24
CDR2-203ENST00000563573 TMEM229AB2RXF0 380 aa7.31□□□□□ -1.24
CDR2-203ENST00000563573 BMP4P12644 408 aa7.31□□□□□ -1.24
CDR2-203ENST00000563573 TRIM50Q86XT4 487 aa7.31□□□□□ -1.24
CDR2-203ENST00000563573 NDFIP2Q9NV92 336 aa7.31□□□□□ -1.24
CDR2-203ENST00000563573 SERTAD1Q9UHV2 236 aa7.31□□□□□ -1.24
CDR2-203ENST00000563573 PRXQ9BXM0 1461 aa7.3□□□□□ -1.24
CDR2-203ENST00000563573 PIK3CDO00329 1044 aa7.3□□□□□ -1.24
CDR2-203ENST00000563573 PIK3R2O00459 728 aa7.3□□□□□ -1.24
CDR2-203ENST00000563573 FGFR3P22607 806 aa7.3□□□□□ -1.24
CDR2-203ENST00000563573 GTF2IP78347 998 aa7.3□□□□□ -1.24
CDR2-203ENST00000563573 PSME1Q06323 249 aa7.3□□□□□ -1.24
CDR2-203ENST00000563573 ARSJQ5FYB0 599 aaPredicted RBP7.3□□□□□ -1.24
CDR2-203ENST00000563573 CHMP7Q8WUX9 453 aaPredicted RBP7.3□□□□□ -1.24
CDR2-203ENST00000563573 FHAD1B1AJZ9 1412 aa7.29□□□□□ -1.24
CDR2-203ENST00000563573 BNIP3LO60238 219 aa7.29□□□□□ -1.24
CDR2-203ENST00000563573 GALNT6Q8NCL4 622 aa7.29□□□□□ -1.24
CDR2-203ENST00000563573 EDARADDQ8WWZ3 215 aa7.29□□□□□ -1.24
CDR2-203ENST00000563573 ABHD17AQ96GS6 310 aa7.29□□□□□ -1.24
CDR2-203ENST00000563573 ZCCHC2Q9C0B9 1178 aaKnown RBP7.29□□□□□ -1.24
CDR2-203ENST00000563573 CABP1Q9NZU7 370 aa7.29□□□□□ -1.24
CDR2-203ENST00000563573 IQSEC3Q9UPP2 1182 aaPredicted RBP7.29□□□□□ -1.24
CDR2-203ENST00000563573 TNIKQ9UKE5 1360 aa7.29□□□□□ -1.24
CDR2-203ENST00000563573 MAGI1Q96QZ7 1491 aaPredicted RBP7.29□□□□□ -1.24
CDR2-203ENST00000563573 CNTNAP5Q8WYK1 1306 aa7.28□□□□□ -1.24
CDR2-203ENST00000563573 USP17L5A8MUK1 530 aa7.28□□□□□ -1.24
CDR2-203ENST00000563573 ATXN7O15265 892 aaPredicted RBP7.28□□□□□ -1.24
CDR2-203ENST00000563573 ATP4AP20648 1035 aa7.28□□□□□ -1.24
CDR2-203ENST00000563573 ATP1A2P50993 1020 aa7.28□□□□□ -1.24
CDR2-203ENST00000563573 NCOA4Q13772 614 aa7.28□□□□□ -1.24
CDR2-203ENST00000563573 ALYREFQ86V81 257 aaKnown RBP7.28□□□□□ -1.24
CDR2-203ENST00000563573 MKL2Q9ULH7 1088 aa7.28□□□□□ -1.24
CDR2-203ENST00000563573 GJA3Q9Y6H8 435 aa7.28□□□□□ -1.24
CDR2-203ENST00000563573 A0A1W2PNR3 127 aa7.27□□□□□ -1.25
CDR2-203ENST00000563573 ARAFP10398 606 aa7.27□□□□□ -1.25
CDR2-203ENST00000563573 FAM182BQ5T319 152 aa7.27□□□□□ -1.25
CDR2-203ENST00000563573 SLCO4C1Q6ZQN7 724 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms