RNA–Protein interactions for RNA: ENST00000560131.1

TPM1-222, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 537 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-222ENST00000560131 SIAH2O43255 324 aa7.14□□□□□ -1.27
TPM1-222ENST00000560131 C21orf2O43822 256 aa7.14□□□□□ -1.27
TPM1-222ENST00000560131 VAMP1P23763 118 aa7.14□□□□□ -1.27
TPM1-222ENST00000560131 FKBP4Q02790 459 aaKnown RBP eCLIP7.14□□□□□ -1.27
TPM1-222ENST00000560131 ZNF211Q13398 564 aaPredicted RBP7.14□□□□□ -1.27
TPM1-222ENST00000560131 SF3B2Q13435 895 aaKnown RBP7.14□□□□□ -1.27
TPM1-222ENST00000560131 AGERQ15109 404 aa7.14□□□□□ -1.27
TPM1-222ENST00000560131 SEPT12Q8IYM1 358 aa7.14□□□□□ -1.27
TPM1-222ENST00000560131 GTF3C2Q8WUA4 911 aaPredicted RBP7.14□□□□□ -1.27
TPM1-222ENST00000560131 BAP1Q92560 729 aa7.14□□□□□ -1.27
TPM1-222ENST00000560131 ESPNB1AK53 854 aa7.13□□□□□ -1.27
TPM1-222ENST00000560131 PTCD1O75127 700 aaKnown RBP7.13□□□□□ -1.27
TPM1-222ENST00000560131 WEE1P30291 646 aa7.13□□□□□ -1.27
TPM1-222ENST00000560131 FOXK2Q01167 660 aa7.13□□□□□ -1.27
TPM1-222ENST00000560131 SCARF1Q14162 830 aa7.13□□□□□ -1.27
TPM1-222ENST00000560131 ECM1Q16610 540 aa7.13□□□□□ -1.27
TPM1-222ENST00000560131 NBPF20Q3BBV1 942 aa7.13□□□□□ -1.27
TPM1-222ENST00000560131 ZSCAN29Q8IWY8 852 aaPredicted RBP7.13□□□□□ -1.27
TPM1-222ENST00000560131 SLC10A4Q96EP9 437 aa7.13□□□□□ -1.27
TPM1-222ENST00000560131 ASB16Q96NS5 453 aa7.13□□□□□ -1.27
TPM1-222ENST00000560131 DCTN4Q9UJW0 460 aa7.13□□□□□ -1.27
TPM1-222ENST00000560131 PCDHB11Q9Y5F2 797 aa7.13□□□□□ -1.27
TPM1-222ENST00000560131 BIVM-ERCC5R4GMW8 1640 aa7.12□□□□□ -1.27
TPM1-222ENST00000560131 ARAP1Q96P48 1450 aa7.12□□□□□ -1.27
TPM1-222ENST00000560131 TCF3P15923 654 aa7.12□□□□□ -1.27
TPM1-222ENST00000560131 MAPK1P28482 360 aa7.12□□□□□ -1.27
TPM1-222ENST00000560131 COL19A1Q14993 1142 aa7.12□□□□□ -1.27
TPM1-222ENST00000560131 FOXJ1Q92949 421 aa7.12□□□□□ -1.27
TPM1-222ENST00000560131 SEPT3Q9UH03 358 aa7.12□□□□□ -1.27
TPM1-222ENST00000560131 CDV3Q9UKY7 258 aaKnown RBP7.12□□□□□ -1.27
TPM1-222ENST00000560131 CDK11AQ9UQ88 783 aaPredicted RBP7.12□□□□□ -1.27
TPM1-222ENST00000560131 PRXQ9BXM0 1461 aa7.11□□□□□ -1.27
TPM1-222ENST00000560131 RAPGEF2Q9Y4G8 1499 aa7.11□□□□□ -1.27
TPM1-222ENST00000560131 CCNB3Q8WWL7 1395 aa7.11□□□□□ -1.27
TPM1-222ENST00000560131 C4orf48Q5BLP8 95 aa7.11□□□□□ -1.27
TPM1-222ENST00000560131 FBXO33Q7Z6M2 555 aa7.11□□□□□ -1.27
TPM1-222ENST00000560131 ZNF511Q8NB15 262 aa7.11□□□□□ -1.27
TPM1-222ENST00000560131 COL26A1Q96A83 441 aa7.11□□□□□ -1.27
TPM1-222ENST00000560131 TOP2BQ02880 1626 aa7.11□□□□□ -1.27
TPM1-222ENST00000560131 SOBPA7XYQ1 873 aa7.1□□□□□ -1.27
TPM1-222ENST00000560131 LGR5O75473 907 aa7.1□□□□□ -1.27
TPM1-222ENST00000560131 ARHGAP4P98171 946 aa7.1□□□□□ -1.27
TPM1-222ENST00000560131 MRPL14Q6P1L8 145 aaKnown RBP7.1□□□□□ -1.27
TPM1-222ENST00000560131 TRMT44Q8IYL2 757 aaKnown RBP7.1□□□□□ -1.27
TPM1-222ENST00000560131 TSEN2Q8NCE0 465 aaKnown RBP7.1□□□□□ -1.27
TPM1-222ENST00000560131 EHBP1Q8NDI1 1231 aa7.1□□□□□ -1.27
TPM1-222ENST00000560131 C1QTNF2Q9BXJ5 285 aa7.1□□□□□ -1.27
TPM1-222ENST00000560131 MYCP01106 439 aaPredicted RBP7.09□□□□□ -1.27
TPM1-222ENST00000560131 IRS1P35568 1242 aa7.09□□□□□ -1.27
TPM1-222ENST00000560131 DEKP35659 375 aaKnown RBP7.09□□□□□ -1.27
TPM1-222ENST00000560131 FKBP5Q13451 457 aaPredicted RBP7.09□□□□□ -1.27
TPM1-222ENST00000560131 LINC01559Q495D7 138 aa7.09□□□□□ -1.27
TPM1-222ENST00000560131 MKNK1Q9BUB5 465 aa7.09□□□□□ -1.27
TPM1-222ENST00000560131 WDR97A6NE52 1622 aa7.09□□□□□ -1.28
TPM1-222ENST00000560131 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.08□□□□□ -1.28
TPM1-222ENST00000560131 PPFIA3O75145 1194 aa7.08□□□□□ -1.28
TPM1-222ENST00000560131 TAGLNQ01995 201 aaKnown RBP7.08□□□□□ -1.28
TPM1-222ENST00000560131 CAPN12Q6ZSI9 719 aa7.08□□□□□ -1.28
TPM1-222ENST00000560131 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.08□□□□□ -1.28
TPM1-222ENST00000560131 PURBQ96QR8 312 aaKnown RBP7.08□□□□□ -1.28
TPM1-222ENST00000560131 NPR3P17342 541 aa7.07□□□□□ -1.28
TPM1-222ENST00000560131 IGFBP4P22692 258 aa7.07□□□□□ -1.28
TPM1-222ENST00000560131 RGL4Q8IZJ4 473 aa7.07□□□□□ -1.28
TPM1-222ENST00000560131 SETD5Q9C0A6 1442 aa7.07□□□□□ -1.28
TPM1-222ENST00000560131 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.06□□□□□ -1.28
TPM1-222ENST00000560131 ANP32CO43423 234 aa7.06□□□□□ -1.28
TPM1-222ENST00000560131 FOXO3O43524 673 aa7.06□□□□□ -1.28
TPM1-222ENST00000560131 FAM13AO94988 1023 aa7.06□□□□□ -1.28
TPM1-222ENST00000560131 SH3BP2P78314 561 aa7.06□□□□□ -1.28
TPM1-222ENST00000560131 MTMR3Q13615 1198 aa7.06□□□□□ -1.28
TPM1-222ENST00000560131 NAA30Q147X3 362 aaPredicted RBP7.06□□□□□ -1.28
TPM1-222ENST00000560131 EAPPQ56P03 285 aaPredicted RBP7.06□□□□□ -1.28
TPM1-222ENST00000560131 KANK3Q6NY19 840 aa7.06□□□□□ -1.28
TPM1-222ENST00000560131 HELQQ8TDG4 1101 aa7.06□□□□□ -1.28
TPM1-222ENST00000560131 C8orf37Q96NL8 207 aa7.06□□□□□ -1.28
TPM1-222ENST00000560131 PSMG3-AS1Q96PY0 264 aa7.06□□□□□ -1.28
TPM1-222ENST00000560131 KCTD15Q96SI1 283 aaPredicted RBP7.06□□□□□ -1.28
TPM1-222ENST00000560131 ESF1Q9H501 851 aaKnown RBP7.06□□□□□ -1.28
TPM1-222ENST00000560131 ZNF358Q9NW07 568 aa7.06□□□□□ -1.28
TPM1-222ENST00000560131 PPP4R2Q9NY27 417 aa7.06□□□□□ -1.28
TPM1-222ENST00000560131 RAB3GAP2Q9H2M9 1393 aa7.06□□□□□ -1.28
TPM1-222ENST00000560131 BACH1O14867 736 aa7.05□□□□□ -1.28
TPM1-222ENST00000560131 ADAM23O75077 832 aa7.05□□□□□ -1.28
TPM1-222ENST00000560131 GAS2L2Q8NHY3 880 aa7.05□□□□□ -1.28
TPM1-222ENST00000560131 CNTNAP3BQ96NU0 1288 aa7.05□□□□□ -1.28
TPM1-222ENST00000560131 CNTNAP3Q9BZ76 1288 aa7.05□□□□□ -1.28
TPM1-222ENST00000560131 TIAM1Q13009 1591 aa7.04□□□□□ -1.28
TPM1-222ENST00000560131 TMEM229AB2RXF0 380 aa7.04□□□□□ -1.28
TPM1-222ENST00000560131 MAN1A2O60476 641 aa7.04□□□□□ -1.28
TPM1-222ENST00000560131 TRIM52Q96A61 297 aa7.04□□□□□ -1.28
TPM1-222ENST00000560131 RBCK1Q9BYM8 510 aa7.04□□□□□ -1.28
TPM1-222ENST00000560131 KRTAP9-2Q9BYQ4 174 aa7.04□□□□□ -1.28
TPM1-222ENST00000560131 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.04□□□□□ -1.28
TPM1-222ENST00000560131 ATAD2Q6PL18 1390 aa7.04□□□□□ -1.28
TPM1-222ENST00000560131 FHAD1B1AJZ9 1412 aa7.03□□□□□ -1.28
TPM1-222ENST00000560131 RECKO95980 971 aa7.03□□□□□ -1.28
TPM1-222ENST00000560131 RAB15P59190 212 aa7.03□□□□□ -1.28
TPM1-222ENST00000560131 KRT76Q01546 638 aa7.03□□□□□ -1.28
TPM1-222ENST00000560131 ZNF385CQ66K41 422 aaPredicted RBP7.03□□□□□ -1.28
TPM1-222ENST00000560131 SCG3Q8WXD2 468 aaKnown RBP7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms