RNA–Protein interactions for RNA: ENST00000558768.5

TRPM1-208, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRPM1, Length 4,581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-208ENST00000558768 SH2D4BQ5SQS7 431 aa11.22□□□□□ -0.61
TRPM1-208ENST00000558768 ATRIPQ8WXE1 791 aa11.22□□□□□ -0.61
TRPM1-208ENST00000558768 ASXL1Q8IXJ9 1541 aa11.22□□□□□ -0.61
TRPM1-208ENST00000558768 CAVIN2O95810 425 aa11.22□□□□□ -0.61
TRPM1-208ENST00000558768 ME1P48163 572 aa11.22□□□□□ -0.61
TRPM1-208ENST00000558768 SCLT1Q96NL6 688 aa11.22□□□□□ -0.61
TRPM1-208ENST00000558768 SPATS2LQ9NUQ6 558 aaKnown RBP11.22□□□□□ -0.61
TRPM1-208ENST00000558768 TRMT1Q9NXH9 659 aaKnown RBP11.22□□□□□ -0.61
TRPM1-208ENST00000558768 TOPBP1Q92547 1522 aa11.22□□□□□ -0.61
TRPM1-208ENST00000558768 PDS5BQ9NTI5 1447 aa11.22□□□□□ -0.61
TRPM1-208ENST00000558768 NAP1L3Q99457 506 aaPredicted RBP11.21□□□□□ -0.61
TRPM1-208ENST00000558768 LMBRD1Q9NUN5 540 aa11.21□□□□□ -0.61
TRPM1-208ENST00000558768 NESP48681 1621 aa11.21□□□□□ -0.61
TRPM1-208ENST00000558768 MCM6Q14566 821 aa11.21□□□□□ -0.61
TRPM1-208ENST00000558768 BRMS1Q9HCU9 246 aa11.21□□□□□ -0.61
TRPM1-208ENST00000558768 DHX16O60231 1041 aaKnown RBP11.21□□□□□ -0.62
TRPM1-208ENST00000558768 SYCP1Q15431 976 aa11.21□□□□□ -0.62
TRPM1-208ENST00000558768 WHAMMP3Q1A5X7 153 aa11.21□□□□□ -0.62
TRPM1-208ENST00000558768 RALYLQ86SE5 291 aaKnown RBP11.21□□□□□ -0.62
TRPM1-208ENST00000558768 ARFGAP2Q8N6H7 521 aa11.21□□□□□ -0.62
TRPM1-208ENST00000558768 RBM42Q9BTD8 480 aaKnown RBP11.21□□□□□ -0.62
TRPM1-208ENST00000558768 NSRP1Q9H0G5 558 aaKnown RBP11.21□□□□□ -0.62
TRPM1-208ENST00000558768 ANO10Q9NW15 660 aa11.21□□□□□ -0.62
TRPM1-208ENST00000558768 DNMBPQ6XZF7 1577 aa11.21□□□□□ -0.62
TRPM1-208ENST00000558768 ZBTB17Q13105 803 aa11.21□□□□□ -0.62
TRPM1-208ENST00000558768 KRBA2Q6ZNG9 492 aa11.21□□□□□ -0.62
TRPM1-208ENST00000558768 ANKS4BQ8N8V4 417 aa11.21□□□□□ -0.62
TRPM1-208ENST00000558768 SPATA32Q96LK8 384 aa11.21□□□□□ -0.62
TRPM1-208ENST00000558768 PRG4Q92954 1404 aaPredicted RBP11.21□□□□□ -0.62
TRPM1-208ENST00000558768 ELL2O00472 640 aaPredicted RBP11.2□□□□□ -0.62
TRPM1-208ENST00000558768 RFC1P35251 1148 aaPredicted RBP11.2□□□□□ -0.62
TRPM1-208ENST00000558768 DBN1Q16643 649 aa11.2□□□□□ -0.62
TRPM1-208ENST00000558768 PPFIBP2Q8ND30 876 aa11.2□□□□□ -0.62
TRPM1-208ENST00000558768 PRDM4Q9UKN5 801 aa11.2□□□□□ -0.62
TRPM1-208ENST00000558768 TNNQ9UQP3 1299 aa11.2□□□□□ -0.62
TRPM1-208ENST00000558768 OPA1O60313 960 aa11.2□□□□□ -0.62
TRPM1-208ENST00000558768 NPC1L1Q9UHC9 1359 aa11.2□□□□□ -0.62
TRPM1-208ENST00000558768 DENND4BO75064 1496 aaPredicted RBP11.2□□□□□ -0.62
TRPM1-208ENST00000558768 ALDH1L2Q3SY69 923 aa11.2□□□□□ -0.62
TRPM1-208ENST00000558768 CCDC158Q5M9N0 1113 aa11.2□□□□□ -0.62
TRPM1-208ENST00000558768 PRDM2Q13029 1718 aa11.2□□□□□ -0.62
TRPM1-208ENST00000558768 NFXL1Q6ZNB6 911 aa11.19□□□□□ -0.62
TRPM1-208ENST00000558768 B4GALNT4Q76KP1 1039 aa11.19□□□□□ -0.62
TRPM1-208ENST00000558768 ZMAT2Q96NC0 199 aaKnown RBP11.19□□□□□ -0.62
TRPM1-208ENST00000558768 C1orf115Q9H7X2 142 aa11.19□□□□□ -0.62
TRPM1-208ENST00000558768 TTC12Q9H892 705 aaPredicted RBP11.19□□□□□ -0.62
TRPM1-208ENST00000558768 STIM2Q9P246 746 aa11.19□□□□□ -0.62
TRPM1-208ENST00000558768 ATP2C2O75185 946 aa11.19□□□□□ -0.62
TRPM1-208ENST00000558768 TOP1P11387 765 aaKnown RBP11.19□□□□□ -0.62
TRPM1-208ENST00000558768 GNAI1P63096 354 aa11.19□□□□□ -0.62
TRPM1-208ENST00000558768 ZNF830Q96NB3 372 aaPredicted RBP11.19□□□□□ -0.62
TRPM1-208ENST00000558768 FOSBP53539 338 aa11.19□□□□□ -0.62
TRPM1-208ENST00000558768 ANKRD1Q15327 319 aa11.19□□□□□ -0.62
TRPM1-208ENST00000558768 LARP1BQ659C4 914 aaKnown RBP11.19□□□□□ -0.62
TRPM1-208ENST00000558768 TMX1Q9H3N1 280 aa11.19□□□□□ -0.62
TRPM1-208ENST00000558768 TERF2IPQ9NYB0 399 aa11.19□□□□□ -0.62
TRPM1-208ENST00000558768 TRAK1Q9UPV9 953 aa11.19□□□□□ -0.62
TRPM1-208ENST00000558768 BCORL1Q5H9F3 1711 aa11.19□□□□□ -0.62
TRPM1-208ENST00000558768 NUP160Q12769 1436 aa11.19□□□□□ -0.62
TRPM1-208ENST00000558768 MBD5Q9P267 1494 aa11.19□□□□□ -0.62
TRPM1-208ENST00000558768 UNC13AQ9UPW8 1703 aa11.19□□□□□ -0.62
TRPM1-208ENST00000558768 KDM6BO15054 1643 aa11.19□□□□□ -0.62
TRPM1-208ENST00000558768 CTTNBP2Q8WZ74 1663 aa11.18□□□□□ -0.62
TRPM1-208ENST00000558768 ERICH2A1L162 156 aa11.18□□□□□ -0.62
TRPM1-208ENST00000558768 DIAPH1O60610 1272 aaKnown RBP11.18□□□□□ -0.62
TRPM1-208ENST00000558768 HSF2BPO75031 334 aa11.18□□□□□ -0.62
TRPM1-208ENST00000558768 NPM1P06748 294 aaKnown RBP eCLIP11.18□□□□□ -0.62
TRPM1-208ENST00000558768 CCDC172P0C7W6 258 aa11.18□□□□□ -0.62
TRPM1-208ENST00000558768 RAI14Q9P0K7 980 aa11.18□□□□□ -0.62
TRPM1-208ENST00000558768 A6NNZ2 444 aa11.18□□□□□ -0.62
TRPM1-208ENST00000558768 TUBB8Q3ZCM7 444 aa11.18□□□□□ -0.62
TRPM1-208ENST00000558768 POLR3AO14802 1390 aaPredicted RBP11.18□□□□□ -0.62
TRPM1-208ENST00000558768 POLR1AO95602 1720 aaPredicted RBP11.18□□□□□ -0.62
TRPM1-208ENST00000558768 INPP5BP32019 993 aa11.18□□□□□ -0.62
TRPM1-208ENST00000558768 PPP6R1Q9UPN7 881 aa11.18□□□□□ -0.62
TRPM1-208ENST00000558768 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.18□□□□□ -0.62
TRPM1-208ENST00000558768 LACTBP83111 547 aaPredicted RBP11.18□□□□□ -0.62
TRPM1-208ENST00000558768 SPA17Q15506 151 aa11.18□□□□□ -0.62
TRPM1-208ENST00000558768 PDLIM2Q96JY6 352 aa11.18□□□□□ -0.62
TRPM1-208ENST00000558768 ABCC11Q96J66 1382 aa11.17□□□□□ -0.62
TRPM1-208ENST00000558768 DNMT1P26358 1616 aaKnown RBP11.17□□□□□ -0.62
TRPM1-208ENST00000558768 NUTM1Q86Y26 1132 aa11.17□□□□□ -0.62
TRPM1-208ENST00000558768 EFCC1Q9HA90 598 aa11.17□□□□□ -0.62
TRPM1-208ENST00000558768 ANKRD18BA2A2Z9 1011 aa11.17□□□□□ -0.62
TRPM1-208ENST00000558768 NOL3O60936 208 aaKnown RBP11.17□□□□□ -0.62
TRPM1-208ENST00000558768 KIF4AO95239 1232 aa11.17□□□□□ -0.62
TRPM1-208ENST00000558768 CTAGE5O15320 804 aa11.17□□□□□ -0.62
TRPM1-208ENST00000558768 UBE4AQ14139 1066 aa11.17□□□□□ -0.62
TRPM1-208ENST00000558768 HLTFQ14527 1009 aaKnown RBP eCLIP11.17□□□□□ -0.62
TRPM1-208ENST00000558768 PAF1Q8N7H5 531 aa11.17□□□□□ -0.62
TRPM1-208ENST00000558768 VCXQ9H320 206 aa11.17□□□□□ -0.62
TRPM1-208ENST00000558768 BCL2L12Q9HB09 334 aa11.17□□□□□ -0.62
TRPM1-208ENST00000558768 EVC2Q86UK5 1308 aa11.17□□□□□ -0.62
TRPM1-208ENST00000558768 TMPOP42166 694 aaKnown RBP11.16□□□□□ -0.62
TRPM1-208ENST00000558768 MAATS1Q7Z4T9 603 aa11.16□□□□□ -0.62
TRPM1-208ENST00000558768 SCAND2PQ9GZW5 306 aaPredicted RBP11.16□□□□□ -0.62
TRPM1-208ENST00000558768 GNG11P61952 73 aa11.16□□□□□ -0.62
TRPM1-208ENST00000558768 CEBPZQ03701 1054 aaKnown RBP11.16□□□□□ -0.62
TRPM1-208ENST00000558768 ZSCAN31Q96LW9 406 aaPredicted RBP11.16□□□□□ -0.62
TRPM1-208ENST00000558768 ZBTB40Q9NUA8 1239 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms