RNA–Protein interactions for RNA: ENST00000558768.5

TRPM1-208, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRPM1, Length 4,581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-208ENST00000558768 MYT1Q01538 1121 aa16.24■□□□□ 0.19
TRPM1-208ENST00000558768 PELP1Q8IZL8 1130 aaKnown RBP16.14■□□□□ 0.18
TRPM1-208ENST00000558768 NISCHQ9Y2I1 1504 aa16.12■□□□□ 0.17
TRPM1-208ENST00000558768 ERICH6Q7L0X2 663 aa15.34■□□□□ 0.05
TRPM1-208ENST00000558768 CCER1Q8TC90 406 aaPredicted RBP15.27■□□□□ 0.03
TRPM1-208ENST00000558768 CENPBP07199 599 aaPredicted RBP15.24■□□□□ 0.03
TRPM1-208ENST00000558768 HRCP23327 699 aa15.23■□□□□ 0.03
TRPM1-208ENST00000558768 SUPT5HO00267 1087 aaKnown RBP15.15■□□□□ 0.02
TRPM1-208ENST00000558768 TTBK1Q5TCY1 1321 aaPredicted RBP15.11■□□□□ 0.01
TRPM1-208ENST00000558768 PCGF6Q9BYE7 350 aa15.09■□□□□ 0.01
TRPM1-208ENST00000558768 SHROOM4Q9ULL8 1493 aa14.9□□□□□ -0.02
TRPM1-208ENST00000558768 ZEB1P37275 1124 aaPredicted RBP14.84□□□□□ -0.03
TRPM1-208ENST00000558768 YTHDC1Q96MU7 727 aaKnown RBP14.78□□□□□ -0.04
TRPM1-208ENST00000558768 PPARGC1BQ86YN6 1023 aaKnown RBP14.74□□□□□ -0.05
TRPM1-208ENST00000558768 NEFLP07196 543 aa14.68□□□□□ -0.06
TRPM1-208ENST00000558768 TRIM26Q12899 539 aaPredicted RBP14.58□□□□□ -0.07
TRPM1-208ENST00000558768 DCAF8L2P0C7V8 631 aa14.58□□□□□ -0.08
TRPM1-208ENST00000558768 CHIC1Q5VXU3 224 aa14.53□□□□□ -0.08
TRPM1-208ENST00000558768 RTL5Q5HYW3 569 aaPredicted RBP14.36□□□□□ -0.11
TRPM1-208ENST00000558768 DAXXQ9UER7 740 aaPredicted RBP14.34□□□□□ -0.11
TRPM1-208ENST00000558768 APLP2Q06481 763 aa14.33□□□□□ -0.11
TRPM1-208ENST00000558768 SCAF1Q9H7N4 1312 aaKnown RBP14.28□□□□□ -0.12
TRPM1-208ENST00000558768 LOC105371045A0A1W2PR82 267 aa14.25□□□□□ -0.13
TRPM1-208ENST00000558768 DCAF1Q9Y4B6 1507 aa14.24□□□□□ -0.13
TRPM1-208ENST00000558768 ACIN1Q9UKV3 1341 aaKnown RBP14.22□□□□□ -0.13
TRPM1-208ENST00000558768 EHMT2Q96KQ7 1210 aa14.17□□□□□ -0.14
TRPM1-208ENST00000558768 GTF3C3Q9Y5Q9 886 aa14.17□□□□□ -0.14
TRPM1-208ENST00000558768 GLIPR1L2Q4G1C9 344 aa14.16□□□□□ -0.14
TRPM1-208ENST00000558768 PRKCSHP14314 528 aaPredicted RBP14.09□□□□□ -0.15
TRPM1-208ENST00000558768 SLC24A1O60721 1099 aa14.08□□□□□ -0.15
TRPM1-208ENST00000558768 FAM9AQ8IZU1 332 aaPredicted RBP14.08□□□□□ -0.15
TRPM1-208ENST00000558768 DIEXFQ68CQ4 756 aaKnown RBP14.07□□□□□ -0.16
TRPM1-208ENST00000558768 TRIM41Q8WV44 630 aa14.06□□□□□ -0.16
TRPM1-208ENST00000558768 MYO15BQ96JP2 1530 aa14.06□□□□□ -0.16
TRPM1-208ENST00000558768 EIF5BO60841 1220 aaKnown RBP14.02□□□□□ -0.16
TRPM1-208ENST00000558768 NEUROD1Q13562 356 aa13.99□□□□□ -0.17
TRPM1-208ENST00000558768 ZNF316A6NFI3 1004 aaPredicted RBP13.95□□□□□ -0.18
TRPM1-208ENST00000558768 BCL11AQ9H165 835 aa13.93□□□□□ -0.18
TRPM1-208ENST00000558768 MYT1LQ9UL68 1186 aa13.93□□□□□ -0.18
TRPM1-208ENST00000558768 CCDC180Q9P1Z9 1646 aa13.92□□□□□ -0.18
TRPM1-208ENST00000558768 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.88□□□□□ -0.19
TRPM1-208ENST00000558768 CDK11AQ9UQ88 783 aaPredicted RBP13.76□□□□□ -0.21
TRPM1-208ENST00000558768 CLSPNQ9HAW4 1339 aa13.71□□□□□ -0.22
TRPM1-208ENST00000558768 ZCCHC6Q5VYS8 1495 aaKnown RBP13.62□□□□□ -0.23
TRPM1-208ENST00000558768 ANP32AP39687 249 aaKnown RBP13.59□□□□□ -0.23
TRPM1-208ENST00000558768 BCANQ96GW7 911 aa13.59□□□□□ -0.23
TRPM1-208ENST00000558768 ANP32EQ9BTT0 268 aa13.55□□□□□ -0.24
TRPM1-208ENST00000558768 UBTFP17480 764 aaKnown RBP13.51□□□□□ -0.25
TRPM1-208ENST00000558768 ANP32BQ92688 251 aaKnown RBP13.5□□□□□ -0.25
TRPM1-208ENST00000558768 RANGAP1P46060 587 aaPredicted RBP13.48□□□□□ -0.25
TRPM1-208ENST00000558768 HNRNPUL2Q1KMD3 747 aaKnown RBP13.46□□□□□ -0.26
TRPM1-208ENST00000558768 MIER1Q8N108 512 aa13.46□□□□□ -0.26
TRPM1-208ENST00000558768 TNNT2P45379 298 aaPredicted RBP13.45□□□□□ -0.26
TRPM1-208ENST00000558768 POLR3GLQ9BT43 218 aa13.31□□□□□ -0.28
TRPM1-208ENST00000558768 SUPT16HQ9Y5B9 1047 aaKnown RBP13.3□□□□□ -0.28
TRPM1-208ENST00000558768 NBR1Q14596 966 aa13.3□□□□□ -0.28
TRPM1-208ENST00000558768 ZBTB47Q9UFB7 747 aaPredicted RBP13.29□□□□□ -0.28
TRPM1-208ENST00000558768 ERICH6BQ5W0A0 696 aa13.28□□□□□ -0.28
TRPM1-208ENST00000558768 CDK11BP21127 795 aaKnown RBP13.28□□□□□ -0.28
TRPM1-208ENST00000558768 ATP1B4Q9UN42 357 aaPredicted RBP13.27□□□□□ -0.29
TRPM1-208ENST00000558768 NCLP19338 710 aaKnown RBP13.25□□□□□ -0.29
TRPM1-208ENST00000558768 ANP32CO43423 234 aa13.25□□□□□ -0.29
TRPM1-208ENST00000558768 NPM2Q86SE8 214 aaKnown RBP13.25□□□□□ -0.29
TRPM1-208ENST00000558768 FKBP8Q14318 412 aa13.24□□□□□ -0.29
TRPM1-208ENST00000558768 TRIM44Q96DX7 344 aaPredicted RBP13.23□□□□□ -0.29
TRPM1-208ENST00000558768 TSHZ2Q9NRE2 1034 aa13.22□□□□□ -0.29
TRPM1-208ENST00000558768 CSRNP3Q8WYN3 585 aa13.2□□□□□ -0.3
TRPM1-208ENST00000558768 CNGB1Q14028 1251 aaPredicted RBP13.19□□□□□ -0.3
TRPM1-208ENST00000558768 NEFMP07197 916 aa13.1□□□□□ -0.31
TRPM1-208ENST00000558768 UPF2Q9HAU5 1272 aaKnown RBP13.1□□□□□ -0.31
TRPM1-208ENST00000558768 ITGAEP38570 1179 aa13.09□□□□□ -0.31
TRPM1-208ENST00000558768 HSP90AA1P07900 732 aaKnown RBP13.08□□□□□ -0.31
TRPM1-208ENST00000558768 RSF1Q96T23 1441 aaPredicted RBP13.08□□□□□ -0.31
TRPM1-208ENST00000558768 NAP1L5Q96NT1 182 aaPredicted RBP13.08□□□□□ -0.32
TRPM1-208ENST00000558768 RBM19Q9Y4C8 960 aaKnown RBP13.05□□□□□ -0.32
TRPM1-208ENST00000558768 RTN4Q9NQC3 1192 aaKnown RBP13.05□□□□□ -0.32
TRPM1-208ENST00000558768 CEP162Q5TB80 1403 aa13.04□□□□□ -0.32
TRPM1-208ENST00000558768 ARXQ96QS3 562 aa13.01□□□□□ -0.33
TRPM1-208ENST00000558768 PODXL2Q9NZ53 605 aa13.01□□□□□ -0.33
TRPM1-208ENST00000558768 PPM1GO15355 546 aaPredicted RBP13.01□□□□□ -0.33
TRPM1-208ENST00000558768 TNIKQ9UKE5 1360 aa12.99□□□□□ -0.33
TRPM1-208ENST00000558768 CANXP27824 592 aaKnown RBP12.98□□□□□ -0.33
TRPM1-208ENST00000558768 RB1CC1Q8TDY2 1594 aa12.97□□□□□ -0.33
TRPM1-208ENST00000558768 DDRGK1Q96HY6 314 aa12.96□□□□□ -0.33
TRPM1-208ENST00000558768 CCDC136Q96JN2 1154 aa12.96□□□□□ -0.33
TRPM1-208ENST00000558768 DDX10Q13206 875 aaKnown RBP12.95□□□□□ -0.34
TRPM1-208ENST00000558768 WRNQ14191 1432 aaPredicted RBP eCLIP12.95□□□□□ -0.34
TRPM1-208ENST00000558768 DEKP35659 375 aaKnown RBP12.94□□□□□ -0.34
TRPM1-208ENST00000558768 EEA1Q15075 1411 aa12.93□□□□□ -0.34
TRPM1-208ENST00000558768 TRIM52Q96A61 297 aa12.92□□□□□ -0.34
TRPM1-208ENST00000558768 ANO8Q9HCE9 1232 aaPredicted RBP12.9□□□□□ -0.34
TRPM1-208ENST00000558768 ABCC9O60706 1549 aa12.9□□□□□ -0.34
TRPM1-208ENST00000558768 PLEKHG5O94827 1062 aa12.88□□□□□ -0.35
TRPM1-208ENST00000558768 DNTTIP2Q5QJE6 756 aaKnown RBP12.88□□□□□ -0.35
TRPM1-208ENST00000558768 HNRNPUQ00839 825 aaKnown RBP eCLIP12.86□□□□□ -0.35
TRPM1-208ENST00000558768 BECN1Q14457 450 aa12.86□□□□□ -0.35
TRPM1-208ENST00000558768 ZNF326Q5BKZ1 582 aaKnown RBP12.86□□□□□ -0.35
TRPM1-208ENST00000558768 AMER1Q5JTC6 1135 aaPredicted RBP12.85□□□□□ -0.35
TRPM1-208ENST00000558768 GOLGA3Q08378 1498 aa12.84□□□□□ -0.35
TRPM1-208ENST00000558768 GOLGA6L22H0YM25 854 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms