RNA–Protein interactions for RNA: ENST00000555816.5

ATXN3-233, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-233ENST00000555816 TARBP1Q13395 1621 aaKnown RBP8.94□□□□□ -0.98
ATXN3-233ENST00000555816 LZTS3O60299 673 aaPredicted RBP8.94□□□□□ -0.98
ATXN3-233ENST00000555816 INHAP05111 366 aa8.94□□□□□ -0.98
ATXN3-233ENST00000555816 MSX1P28360 303 aa8.94□□□□□ -0.98
ATXN3-233ENST00000555816 FIGNL1Q6PIW4 674 aa8.94□□□□□ -0.98
ATXN3-233ENST00000555816 ALYREFQ86V81 257 aaKnown RBP8.94□□□□□ -0.98
ATXN3-233ENST00000555816 GDPD2Q9HCC8 539 aa8.94□□□□□ -0.98
ATXN3-233ENST00000555816 VAC14Q08AM6 782 aa8.93□□□□□ -0.98
ATXN3-233ENST00000555816 UBAP2LQ14157 1087 aaKnown RBP8.93□□□□□ -0.98
ATXN3-233ENST00000555816 TLR1Q15399 786 aa8.93□□□□□ -0.98
ATXN3-233ENST00000555816 GPAMQ9HCL2 828 aa8.93□□□□□ -0.98
ATXN3-233ENST00000555816 SNAPC4Q5SXM2 1469 aa8.92□□□□□ -0.98
ATXN3-233ENST00000555816 CNTNAP5Q8WYK1 1306 aa8.92□□□□□ -0.98
ATXN3-233ENST00000555816 THBS1P07996 1170 aa8.92□□□□□ -0.98
ATXN3-233ENST00000555816 ABL2P42684 1182 aa8.92□□□□□ -0.98
ATXN3-233ENST00000555816 OXLD1Q5BKU9 147 aa8.92□□□□□ -0.98
ATXN3-233ENST00000555816 GPAT2Q6NUI2 795 aa8.92□□□□□ -0.98
ATXN3-233ENST00000555816 NLRP8Q86W28 1048 aa8.92□□□□□ -0.98
ATXN3-233ENST00000555816 GOLGA6L1Q8N7Z2 621 aa8.92□□□□□ -0.98
ATXN3-233ENST00000555816 KLRG1Q96E93 195 aa8.92□□□□□ -0.98
ATXN3-233ENST00000555816 NIFKQ9BYG3 293 aaKnown RBP8.92□□□□□ -0.98
ATXN3-233ENST00000555816 LOC100996750A0A140TA64 210 aa8.91□□□□□ -0.98
ATXN3-233ENST00000555816 SMTNP53814 917 aa8.91□□□□□ -0.98
ATXN3-233ENST00000555816 TBC1D9Q6ZT07 1266 aa8.91□□□□□ -0.98
ATXN3-233ENST00000555816 PLPP7Q8NBV4 271 aa8.91□□□□□ -0.98
ATXN3-233ENST00000555816 SLC4A9Q96Q91 983 aa8.91□□□□□ -0.98
ATXN3-233ENST00000555816 KRTAP4-6Q9BYQ5 205 aa8.91□□□□□ -0.98
ATXN3-233ENST00000555816 CHD1O14646 1710 aa8.91□□□□□ -0.98
ATXN3-233ENST00000555816 MAGI1Q96QZ7 1491 aaPredicted RBP8.9□□□□□ -0.98
ATXN3-233ENST00000555816 PIK3R2O00459 728 aa8.9□□□□□ -0.98
ATXN3-233ENST00000555816 SCNN1DP51172 638 aa8.9□□□□□ -0.98
ATXN3-233ENST00000555816 GDF10P55107 478 aa8.9□□□□□ -0.98
ATXN3-233ENST00000555816 WWC1Q8IX03 1113 aa8.9□□□□□ -0.98
ATXN3-233ENST00000555816 GALNT6Q8NCL4 622 aa8.9□□□□□ -0.98
ATXN3-233ENST00000555816 DCAF5Q96JK2 942 aa8.9□□□□□ -0.98
ATXN3-233ENST00000555816 RUBCNLQ9H714 662 aa8.9□□□□□ -0.98
ATXN3-233ENST00000555816 NDFIP2Q9NV92 336 aa8.9□□□□□ -0.98
ATXN3-233ENST00000555816 CLASP1Q7Z460 1538 aa8.9□□□□□ -0.99
ATXN3-233ENST00000555816 GRIN2BQ13224 1484 aa8.89□□□□□ -0.99
ATXN3-233ENST00000555816 GAPVD1Q14C86 1478 aa8.89□□□□□ -0.99
ATXN3-233ENST00000555816 CDK2AP1O14519 115 aa8.89□□□□□ -0.99
ATXN3-233ENST00000555816 MKL2Q9ULH7 1088 aa8.89□□□□□ -0.99
ATXN3-233ENST00000555816 PCDHGC4Q9Y5F7 938 aa8.89□□□□□ -0.99
ATXN3-233ENST00000555816 SYNJ1O43426 1573 aa8.89□□□□□ -0.99
ATXN3-233ENST00000555816 SYNJ2O15056 1496 aa8.89□□□□□ -0.99
ATXN3-233ENST00000555816 BMP4P12644 408 aa8.88□□□□□ -0.99
ATXN3-233ENST00000555816 MCM6Q14566 821 aa8.88□□□□□ -0.99
ATXN3-233ENST00000555816 NFATC2IPQ8NCF5 419 aa8.88□□□□□ -0.99
ATXN3-233ENST00000555816 EDARADDQ8WWZ3 215 aa8.88□□□□□ -0.99
ATXN3-233ENST00000555816 PRDM2Q13029 1718 aa8.88□□□□□ -0.99
ATXN3-233ENST00000555816 MSTNO14793 375 aa8.87□□□□□ -0.99
ATXN3-233ENST00000555816 BACH1O14867 736 aa8.87□□□□□ -0.99
ATXN3-233ENST00000555816 FGFR3P22607 806 aa8.87□□□□□ -0.99
ATXN3-233ENST00000555816 MTFR1Q15390 333 aa8.87□□□□□ -0.99
ATXN3-233ENST00000555816 FGD5Q6ZNL6 1462 aa8.86□□□□□ -0.99
ATXN3-233ENST00000555816 BNIP3LO60238 219 aa8.86□□□□□ -0.99
ATXN3-233ENST00000555816 NBPF1Q3BBV0 1214 aa8.86□□□□□ -0.99
ATXN3-233ENST00000555816 PLA2G4EQ3MJ16 856 aa8.86□□□□□ -0.99
ATXN3-233ENST00000555816 SLCO4C1Q6ZQN7 724 aa8.86□□□□□ -0.99
ATXN3-233ENST00000555816 ZDHHC3Q9NYG2 299 aa8.86□□□□□ -0.99
ATXN3-233ENST00000555816 A6NJY4 79 aa8.85□□□□□ -0.99
ATXN3-233ENST00000555816 ARAFP10398 606 aa8.85□□□□□ -0.99
ATXN3-233ENST00000555816 PLA2G4AP47712 749 aa8.85□□□□□ -0.99
ATXN3-233ENST00000555816 EML3Q32P44 896 aa8.85□□□□□ -0.99
ATXN3-233ENST00000555816 FAM182BQ5T319 152 aa8.85□□□□□ -0.99
ATXN3-233ENST00000555816 ABHD17AQ96GS6 310 aa8.85□□□□□ -0.99
ATXN3-233ENST00000555816 ZCCHC2Q9C0B9 1178 aaKnown RBP8.85□□□□□ -0.99
ATXN3-233ENST00000555816 AVENQ9NQS1 362 aaPredicted RBP8.85□□□□□ -0.99
ATXN3-233ENST00000555816 WDR97A6NE52 1622 aa8.84□□□□□ -0.99
ATXN3-233ENST00000555816 TATP17735 454 aaPredicted RBP8.84□□□□□ -0.99
ATXN3-233ENST00000555816 AIDAQ96BJ3 306 aa8.84□□□□□ -0.99
ATXN3-233ENST00000555816 ALG2Q9H553 416 aa8.84□□□□□ -0.99
ATXN3-233ENST00000555816 DNAAF2Q9NVR5 837 aaKnown RBP8.84□□□□□ -0.99
ATXN3-233ENST00000555816 NOD1Q9Y239 953 aa8.84□□□□□ -0.99
ATXN3-233ENST00000555816 PCDHGA11Q9Y5H2 935 aa8.84□□□□□ -0.99
ATXN3-233ENST00000555816 TMEM229AB2RXF0 380 aa8.83□□□□□ -1
ATXN3-233ENST00000555816 C2CD2LO14523 706 aa8.83□□□□□ -1
ATXN3-233ENST00000555816 STAU1O95793 577 aaKnown RBP8.83□□□□□ -1
ATXN3-233ENST00000555816 IQSEC3Q9UPP2 1182 aaPredicted RBP8.83□□□□□ -1
ATXN3-233ENST00000555816 COG6Q9Y2V7 657 aa8.83□□□□□ -1
ATXN3-233ENST00000555816 SHISA8B8ZZ34 492 aa8.82□□□□□ -1
ATXN3-233ENST00000555816 ATXN7O15265 892 aaPredicted RBP8.82□□□□□ -1
ATXN3-233ENST00000555816 ATP4AP20648 1035 aa8.82□□□□□ -1
ATXN3-233ENST00000555816 CTBSQ01459 385 aa8.82□□□□□ -1
ATXN3-233ENST00000555816 ARSJQ5FYB0 599 aaPredicted RBP8.82□□□□□ -1
ATXN3-233ENST00000555816 C1orf229Q6ZS94 237 aaPredicted RBP8.82□□□□□ -1
ATXN3-233ENST00000555816 ZNF295-AS1Q8N0V1 137 aa8.82□□□□□ -1
ATXN3-233ENST00000555816 GGA1Q9UJY5 639 aa8.82□□□□□ -1
ATXN3-233ENST00000555816 EPXP11678 715 aa8.81□□□□□ -1
ATXN3-233ENST00000555816 SNRPNP63162 240 aaKnown RBP8.81□□□□□ -1
ATXN3-233ENST00000555816 TNP2Q05952 138 aa8.81□□□□□ -1
ATXN3-233ENST00000555816 LAMC2Q13753 1193 aa8.81□□□□□ -1
ATXN3-233ENST00000555816 SPOCK3Q9BQ16 436 aa8.81□□□□□ -1
ATXN3-233ENST00000555816 RRAGCQ9HB90 399 aa8.81□□□□□ -1
ATXN3-233ENST00000555816 GPC6Q9Y625 555 aaPredicted RBP8.81□□□□□ -1
ATXN3-233ENST00000555816 A0A1W2PNR3 127 aa8.8□□□□□ -1
ATXN3-233ENST00000555816 RAD21O60216 631 aa8.8□□□□□ -1
ATXN3-233ENST00000555816 SAMD5Q5TGI4 173 aa8.8□□□□□ -1
ATXN3-233ENST00000555816 BTBD6Q96KE9 485 aa8.8□□□□□ -1
ATXN3-233ENST00000555816 SERTAD1Q9UHV2 236 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms