RNA–Protein interactions for RNA: ENST00000552388.1

CDK4-212, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-212ENST00000552388 CFAP44Q96MT7 982 aa17.14■□□□□ 0.33
CDK4-212ENST00000552388 TSPYL4Q9UJ04 414 aa17.14■□□□□ 0.33
CDK4-212ENST00000552388 PNPLA7Q6ZV29 1317 aa17.14■□□□□ 0.33
CDK4-212ENST00000552388 RC3H1Q5TC82 1133 aaKnown RBP17.13■□□□□ 0.33
CDK4-212ENST00000552388 TEX13AQ9BXU3 409 aaPredicted RBP17.13■□□□□ 0.33
CDK4-212ENST00000552388 IFT57Q9NWB7 429 aa17.13■□□□□ 0.33
CDK4-212ENST00000552388 CNTNAP4Q9C0A0 1308 aa17.13■□□□□ 0.33
CDK4-212ENST00000552388 C4AP0C0L4 1744 aa17.13■□□□□ 0.33
CDK4-212ENST00000552388 EIF4A1P60842 406 aaKnown RBP17.12■□□□□ 0.33
CDK4-212ENST00000552388 GNAI1P63096 354 aa17.12■□□□□ 0.33
CDK4-212ENST00000552388 SNRPA1P09661 255 aaKnown RBP17.11■□□□□ 0.33
CDK4-212ENST00000552388 CYP19A1P11511 503 aaPredicted RBP17.11■□□□□ 0.33
CDK4-212ENST00000552388 WDR63Q8IWG1 891 aa17.11■□□□□ 0.33
CDK4-212ENST00000552388 AK7Q96M32 723 aa17.11■□□□□ 0.33
CDK4-212ENST00000552388 SALL2Q9Y467 1007 aaPredicted RBP17.11■□□□□ 0.33
CDK4-212ENST00000552388 LAS1LQ9Y4W2 734 aaKnown RBP17.11■□□□□ 0.33
CDK4-212ENST00000552388 IL16Q14005 1332 aa17.11■□□□□ 0.33
CDK4-212ENST00000552388 TFCP2L1Q9NZI6 479 aa17.1■□□□□ 0.33
CDK4-212ENST00000552388 GIGYF1O75420 1035 aaPredicted RBP17.09■□□□□ 0.33
CDK4-212ENST00000552388 STARD3NLO95772 234 aa17.09■□□□□ 0.33
CDK4-212ENST00000552388 CRKLP46109 303 aaKnown RBP17.09■□□□□ 0.33
CDK4-212ENST00000552388 MBIPQ9NS73 344 aa17.09■□□□□ 0.33
CDK4-212ENST00000552388 ZNF521Q96K83 1311 aa17.09■□□□□ 0.33
CDK4-212ENST00000552388 PRAMEF22A3QJZ6 481 aa17.08■□□□□ 0.32
CDK4-212ENST00000552388 GNPATO15228 680 aa17.08■□□□□ 0.32
CDK4-212ENST00000552388 SSFA2P28290 1259 aa17.08■□□□□ 0.32
CDK4-212ENST00000552388 INTS5Q6P9B9 1019 aaKnown RBP17.08■□□□□ 0.32
CDK4-212ENST00000552388 RPS6KA4O75676 772 aa17.07■□□□□ 0.32
CDK4-212ENST00000552388 AMIGO3Q86WK7 504 aa17.07■□□□□ 0.32
CDK4-212ENST00000552388 FLAD1Q8NFF5 587 aa17.07■□□□□ 0.32
CDK4-212ENST00000552388 CCDC87Q9NVE4 849 aa17.07■□□□□ 0.32
CDK4-212ENST00000552388 RTCBQ9Y3I0 505 aaKnown RBP17.07■□□□□ 0.32
CDK4-212ENST00000552388 USP16Q9Y5T5 823 aa17.07■□□□□ 0.32
CDK4-212ENST00000552388 C1QTNF8P60827 252 aa17.06■□□□□ 0.32
CDK4-212ENST00000552388 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.05■□□□□ 0.32
CDK4-212ENST00000552388 ADRA2BP18089 450 aa17.05■□□□□ 0.32
CDK4-212ENST00000552388 COL23A1Q86Y22 540 aaPredicted RBP17.05■□□□□ 0.32
CDK4-212ENST00000552388 ZBTB1Q9Y2K1 713 aa17.05■□□□□ 0.32
CDK4-212ENST00000552388 SOS1Q07889 1333 aaPredicted RBP17.04■□□□□ 0.32
CDK4-212ENST00000552388 BCORQ6W2J9 1755 aa17.03■□□□□ 0.32
CDK4-212ENST00000552388 A1BGP04217 495 aa17.03■□□□□ 0.32
CDK4-212ENST00000552388 HOXB7P09629 217 aa17.03■□□□□ 0.32
CDK4-212ENST00000552388 KRT24Q2M2I5 525 aa17.03■□□□□ 0.32
CDK4-212ENST00000552388 TRAPPC3LQ5T215 181 aa17.03■□□□□ 0.32
CDK4-212ENST00000552388 CACNA1FO60840 1977 aa17.02■□□□□ 0.32
CDK4-212ENST00000552388 SCN7AQ01118 1682 aa17.02■□□□□ 0.32
CDK4-212ENST00000552388 PHF14O94880 888 aa17.02■□□□□ 0.32
CDK4-212ENST00000552388 POLD1P28340 1107 aa17.02■□□□□ 0.32
CDK4-212ENST00000552388 IL6STP40189 918 aaPredicted RBP17.02■□□□□ 0.32
CDK4-212ENST00000552388 SMIM5Q71RC9 77 aa17.02■□□□□ 0.32
CDK4-212ENST00000552388 NLGN2Q8NFZ4 835 aa17.02■□□□□ 0.32
CDK4-212ENST00000552388 TSR2Q969E8 191 aaKnown RBP17.02■□□□□ 0.32
CDK4-212ENST00000552388 SPINK5Q9NQ38 1064 aaPredicted RBP17.02■□□□□ 0.32
CDK4-212ENST00000552388 COL15A1P39059 1388 aa17.02■□□□□ 0.31
CDK4-212ENST00000552388 FANCIQ9NVI1 1328 aa17.01■□□□□ 0.31
CDK4-212ENST00000552388 CANXP27824 592 aaKnown RBP17.01■□□□□ 0.31
CDK4-212ENST00000552388 EIF5P55010 431 aaKnown RBP17.01■□□□□ 0.31
CDK4-212ENST00000552388 GOLGA2Q08379 1002 aa17.01■□□□□ 0.31
CDK4-212ENST00000552388 ARHGEF1Q92888 912 aaKnown RBP17.01■□□□□ 0.31
CDK4-212ENST00000552388 ERBB4Q15303 1308 aa17■□□□□ 0.31
CDK4-212ENST00000552388 CEP350Q5VT06 3117 aa17■□□□□ 0.31
CDK4-212ENST00000552388 NBPF26B4DH59 902 aa17■□□□□ 0.31
CDK4-212ENST00000552388 DUSP27Q5VZP5 1158 aa17■□□□□ 0.31
CDK4-212ENST00000552388 NBPF10Q6P3W6 841 aaKnown RBP17■□□□□ 0.31
CDK4-212ENST00000552388 NBPF15Q8N660 670 aa17■□□□□ 0.31
CDK4-212ENST00000552388 MYH16Q9H6N6 1097 aa17■□□□□ 0.31
CDK4-212ENST00000552388 ADCY9O60503 1353 aa17■□□□□ 0.31
CDK4-212ENST00000552388 MSH5O43196 834 aa16.99■□□□□ 0.31
CDK4-212ENST00000552388 HNRNPUQ00839 825 aaKnown RBP eCLIP16.99■□□□□ 0.31
CDK4-212ENST00000552388 C8orf58Q8NAV2 365 aa16.99■□□□□ 0.31
CDK4-212ENST00000552388 A0A087WZG4 1122 aa16.98■□□□□ 0.31
CDK4-212ENST00000552388 E9PSI1 815 aa16.98■□□□□ 0.31
CDK4-212ENST00000552388 YBX3P16989 372 aaKnown RBP eCLIP16.98■□□□□ 0.314e-7■□□□□ 10
CDK4-212ENST00000552388 EIF2S2P20042 333 aaKnown RBP16.98■□□□□ 0.31
CDK4-212ENST00000552388 RFC4P35249 363 aa16.98■□□□□ 0.31
CDK4-212ENST00000552388 GPR162Q16538 588 aa16.98■□□□□ 0.31
CDK4-212ENST00000552388 NUP98P52948 1817 aa16.98■□□□□ 0.31
CDK4-212ENST00000552388 USP42Q9H9J4 1324 aaKnown RBP16.97■□□□□ 0.31
CDK4-212ENST00000552388 PIP4K2AP48426 406 aaPredicted RBP16.97■□□□□ 0.31
CDK4-212ENST00000552388 SLFN5Q08AF3 891 aa16.97■□□□□ 0.31
CDK4-212ENST00000552388 NARFQ9UHQ1 456 aa16.97■□□□□ 0.31
CDK4-212ENST00000552388 ELL2O00472 640 aaPredicted RBP16.96■□□□□ 0.31
CDK4-212ENST00000552388 PDIA6Q15084 440 aa16.96■□□□□ 0.31
CDK4-212ENST00000552388 HDGFL1Q5TGJ6 251 aa16.96■□□□□ 0.31
CDK4-212ENST00000552388 TSPYL6Q8N831 410 aa16.96■□□□□ 0.31
CDK4-212ENST00000552388 EXOSC9Q06265 439 aaKnown RBP16.95■□□□□ 0.3
CDK4-212ENST00000552388 TWISTNBQ3B726 338 aaPredicted RBP16.95■□□□□ 0.3
CDK4-212ENST00000552388 LRP10Q7Z4F1 713 aa16.95■□□□□ 0.3
CDK4-212ENST00000552388 NPM2Q86SE8 214 aaKnown RBP16.95■□□□□ 0.3
CDK4-212ENST00000552388 TRMT2AQ8IZ69 625 aaKnown RBP16.95■□□□□ 0.3
CDK4-212ENST00000552388 CDCA7LQ96GN5 454 aa16.95■□□□□ 0.3
CDK4-212ENST00000552388 CHMP4AQ9BY43 222 aa16.95■□□□□ 0.3
CDK4-212ENST00000552388 ZNF330Q9Y3S2 320 aaPredicted RBP16.95■□□□□ 0.3
CDK4-212ENST00000552388 ZBED9Q6R2W3 1325 aa16.95■□□□□ 0.3
CDK4-212ENST00000552388 ZPR1O75312 459 aa16.94■□□□□ 0.3
CDK4-212ENST00000552388 GYS1P13807 737 aa16.94■□□□□ 0.3
CDK4-212ENST00000552388 NECTIN2Q92692 538 aa16.94■□□□□ 0.3
CDK4-212ENST00000552388 DDX21Q9NR30 783 aaKnown RBP eCLIP16.94■□□□□ 0.3
CDK4-212ENST00000552388 SRP68Q9UHB9 627 aaKnown RBP16.94■□□□□ 0.3
CDK4-212ENST00000552388 ANKRD36CQ5JPF3 1778 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms