RNA–Protein interactions for RNA: ENST00000551391.1

SCAF11-215, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-215ENST00000551391 USP17L2Q6R6M4 530 aa6.76□□□□□ -1.33
SCAF11-215ENST00000551391 USP17L1Q7RTZ2 530 aa6.76□□□□□ -1.33
SCAF11-215ENST00000551391 ALYREFQ86V81 257 aaKnown RBP6.76□□□□□ -1.33
SCAF11-215ENST00000551391 GOLGA6L1Q8N7Z2 621 aa6.76□□□□□ -1.33
SCAF11-215ENST00000551391 SIRT1Q96EB6 747 aa6.76□□□□□ -1.33
SCAF11-215ENST00000551391 XAGE2Q96GT9 111 aa6.76□□□□□ -1.33
SCAF11-215ENST00000551391 DOLKQ9UPQ8 538 aa6.76□□□□□ -1.33
SCAF11-215ENST00000551391 PROCP04070 461 aa6.75□□□□□ -1.33
SCAF11-215ENST00000551391 EML3Q32P44 896 aa6.75□□□□□ -1.33
SCAF11-215ENST00000551391 C4orf17Q53FE4 359 aa6.75□□□□□ -1.33
SCAF11-215ENST00000551391 KANK4Q5T7N3 995 aaPredicted RBP6.75□□□□□ -1.33
SCAF11-215ENST00000551391 PBXIP1Q96AQ6 731 aa6.75□□□□□ -1.33
SCAF11-215ENST00000551391 CDCA7Q9BWT1 371 aaPredicted RBP6.75□□□□□ -1.33
SCAF11-215ENST00000551391 RUBCNLQ9H714 662 aa6.75□□□□□ -1.33
SCAF11-215ENST00000551391 ATXN7L1Q9ULK2 861 aaPredicted RBP6.75□□□□□ -1.33
SCAF11-215ENST00000551391 SHISA8B8ZZ34 492 aa6.74□□□□□ -1.33
SCAF11-215ENST00000551391 ITGB2P05107 769 aa6.74□□□□□ -1.33
SCAF11-215ENST00000551391 MSX1P28360 303 aa6.74□□□□□ -1.33
SCAF11-215ENST00000551391 NCOA4Q13772 614 aa6.74□□□□□ -1.33
SCAF11-215ENST00000551391 K7ELQ4 463 aaPredicted RBP6.73□□□□□ -1.33
SCAF11-215ENST00000551391 THBS1P07996 1170 aa6.73□□□□□ -1.33
SCAF11-215ENST00000551391 RFX1P22670 979 aa6.73□□□□□ -1.33
SCAF11-215ENST00000551391 DEPDC4Q8N2C3 294 aa6.73□□□□□ -1.33
SCAF11-215ENST00000551391 RHBDD1Q8TEB9 315 aa6.73□□□□□ -1.33
SCAF11-215ENST00000551391 FHDC1Q9C0D6 1143 aaPredicted RBP6.73□□□□□ -1.33
SCAF11-215ENST00000551391 VRTNQ9H8Y1 702 aa6.73□□□□□ -1.33
SCAF11-215ENST00000551391 MKRN1Q9UHC7 482 aaKnown RBP6.73□□□□□ -1.33
SCAF11-215ENST00000551391 NOD1Q9Y239 953 aa6.73□□□□□ -1.33
SCAF11-215ENST00000551391 KRBA1A5PL33 1030 aa6.72□□□□□ -1.33
SCAF11-215ENST00000551391 BAG6P46379 1132 aa6.72□□□□□ -1.33
SCAF11-215ENST00000551391 GRIN2CQ14957 1233 aa6.72□□□□□ -1.33
SCAF11-215ENST00000551391 OXLD1Q5BKU9 147 aa6.72□□□□□ -1.33
SCAF11-215ENST00000551391 FIGNL1Q6PIW4 674 aa6.72□□□□□ -1.33
SCAF11-215ENST00000551391 C1orf229Q6ZS94 237 aaPredicted RBP6.72□□□□□ -1.33
SCAF11-215ENST00000551391 TRIM50Q86XT4 487 aa6.72□□□□□ -1.33
SCAF11-215ENST00000551391 ABHD17AQ96GS6 310 aa6.72□□□□□ -1.33
SCAF11-215ENST00000551391 HRH3Q9Y5N1 445 aa6.72□□□□□ -1.33
SCAF11-215ENST00000551391 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.71□□□□□ -1.34
SCAF11-215ENST00000551391 ATG7O95352 703 aa6.71□□□□□ -1.34
SCAF11-215ENST00000551391 FGFR3P22607 806 aa6.71□□□□□ -1.34
SCAF11-215ENST00000551391 TLR1Q15399 786 aa6.71□□□□□ -1.34
SCAF11-215ENST00000551391 GGA1Q9UJY5 639 aa6.71□□□□□ -1.34
SCAF11-215ENST00000551391 ACIN1Q9UKV3 1341 aaKnown RBP6.71□□□□□ -1.34
SCAF11-215ENST00000551391 FAM196BA6NMK8 535 aa6.7□□□□□ -1.34
SCAF11-215ENST00000551391 BNIP3LO60238 219 aa6.7□□□□□ -1.34
SCAF11-215ENST00000551391 ATP1A2P50993 1020 aa6.7□□□□□ -1.34
SCAF11-215ENST00000551391 UBAP2LQ14157 1087 aaKnown RBP6.7□□□□□ -1.34
SCAF11-215ENST00000551391 ELOAQ14241 798 aaKnown RBP6.7□□□□□ -1.34
SCAF11-215ENST00000551391 XP32Q5T750 250 aa6.7□□□□□ -1.34
SCAF11-215ENST00000551391 SLCO4C1Q6ZQN7 724 aa6.7□□□□□ -1.34
SCAF11-215ENST00000551391 PPARGC1BQ86YN6 1023 aaKnown RBP6.7□□□□□ -1.34
SCAF11-215ENST00000551391 AIDAQ96BJ3 306 aa6.7□□□□□ -1.34
SCAF11-215ENST00000551391 ETNK1Q9HBU6 452 aa6.7□□□□□ -1.34
SCAF11-215ENST00000551391 PCDHGA11Q9Y5H2 935 aa6.7□□□□□ -1.34
SCAF11-215ENST00000551391 C2CD2LO14523 706 aa6.69□□□□□ -1.34
SCAF11-215ENST00000551391 GNB5O14775 395 aa6.69□□□□□ -1.34
SCAF11-215ENST00000551391 PLA2G4AP47712 749 aa6.69□□□□□ -1.34
SCAF11-215ENST00000551391 CTBSQ01459 385 aa6.69□□□□□ -1.34
SCAF11-215ENST00000551391 LARGE2Q8N3Y3 721 aa6.69□□□□□ -1.34
SCAF11-215ENST00000551391 CRISPLD1Q9H336 500 aa6.69□□□□□ -1.34
SCAF11-215ENST00000551391 NOP53Q9NZM5 478 aaKnown RBP6.69□□□□□ -1.34
SCAF11-215ENST00000551391 ZBTB7BO15156 539 aaPredicted RBP6.68□□□□□ -1.34
SCAF11-215ENST00000551391 FURINP09958 794 aa6.68□□□□□ -1.34
SCAF11-215ENST00000551391 ARAFP10398 606 aa6.68□□□□□ -1.34
SCAF11-215ENST00000551391 RASA1P20936 1047 aa6.68□□□□□ -1.34
SCAF11-215ENST00000551391 COL8A1P27658 744 aa6.68□□□□□ -1.34
SCAF11-215ENST00000551391 GTF2IP78347 998 aa6.68□□□□□ -1.34
SCAF11-215ENST00000551391 PTK7Q13308 1070 aa6.68□□□□□ -1.34
SCAF11-215ENST00000551391 LARP1Q6PKG0 1096 aaKnown RBP6.68□□□□□ -1.34
SCAF11-215ENST00000551391 LINC00114Q6XXX2 140 aa6.68□□□□□ -1.34
SCAF11-215ENST00000551391 OGFOD1Q8N543 542 aa6.68□□□□□ -1.34
SCAF11-215ENST00000551391 C1orf216Q8TAB5 229 aa6.68□□□□□ -1.34
SCAF11-215ENST00000551391 BTBD6Q96KE9 485 aa6.68□□□□□ -1.34
SCAF11-215ENST00000551391 ARXQ96QS3 562 aa6.68□□□□□ -1.34
SCAF11-215ENST00000551391 NIFKQ9BYG3 293 aaKnown RBP6.68□□□□□ -1.34
SCAF11-215ENST00000551391 ZCCHC2Q9C0B9 1178 aaKnown RBP6.68□□□□□ -1.34
SCAF11-215ENST00000551391 DNAAF2Q9NVR5 837 aaKnown RBP6.68□□□□□ -1.34
SCAF11-215ENST00000551391 PCDHGC4Q9Y5F7 938 aa6.68□□□□□ -1.34
SCAF11-215ENST00000551391 NEURL1BA8MQ27 555 aa6.67□□□□□ -1.34
SCAF11-215ENST00000551391 EPXP11678 715 aa6.67□□□□□ -1.34
SCAF11-215ENST00000551391 CLDN10P78369 228 aa6.67□□□□□ -1.34
SCAF11-215ENST00000551391 ARSJQ5FYB0 599 aaPredicted RBP6.67□□□□□ -1.34
SCAF11-215ENST00000551391 NLRP8Q86W28 1048 aa6.67□□□□□ -1.34
SCAF11-215ENST00000551391 SIX5Q8N196 739 aa6.67□□□□□ -1.34
SCAF11-215ENST00000551391 NDFIP2Q9NV92 336 aa6.67□□□□□ -1.34
SCAF11-215ENST00000551391 USP17L15C9J2P7 530 aa6.66□□□□□ -1.34
SCAF11-215ENST00000551391 USP17L10C9JJH3 530 aa6.66□□□□□ -1.34
SCAF11-215ENST00000551391 USP17L13C9JLJ4 530 aa6.66□□□□□ -1.34
SCAF11-215ENST00000551391 USP17L12C9JPN9 530 aa6.66□□□□□ -1.34
SCAF11-215ENST00000551391 USP17L11C9JVI0 530 aa6.66□□□□□ -1.34
SCAF11-215ENST00000551391 USP17L21D6R901 530 aa6.66□□□□□ -1.34
SCAF11-215ENST00000551391 USP17L18D6R9N7 530 aa6.66□□□□□ -1.34
SCAF11-215ENST00000551391 USP17L22D6RA61 530 aa6.66□□□□□ -1.34
SCAF11-215ENST00000551391 USP17L17D6RBQ6 530 aa6.66□□□□□ -1.34
SCAF11-215ENST00000551391 USP17L19D6RCP7 530 aa6.66□□□□□ -1.34
SCAF11-215ENST00000551391 USP17L20D6RJB6 530 aa6.66□□□□□ -1.34
SCAF11-215ENST00000551391 ATXN7O15265 892 aaPredicted RBP6.66□□□□□ -1.34
SCAF11-215ENST00000551391 DKK1O94907 266 aa6.66□□□□□ -1.34
SCAF11-215ENST00000551391 STAU1O95793 577 aaKnown RBP6.66□□□□□ -1.34
SCAF11-215ENST00000551391 INHAP05111 366 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms