RNA–Protein interactions for RNA: ENST00000550016.5

DDX54-207, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-207ENST00000550016 PHF14O94880 888 aa25.3■■□□□ 1.64
DDX54-207ENST00000550016 ZBTB7AO95365 584 aa25.3■■□□□ 1.64
DDX54-207ENST00000550016 EIF4A1P60842 406 aaKnown RBP25.3■■□□□ 1.64
DDX54-207ENST00000550016 SMIM5Q71RC9 77 aa25.3■■□□□ 1.64
DDX54-207ENST00000550016 SPON1Q9HCB6 807 aa25.3■■□□□ 1.64
DDX54-207ENST00000550016 LAS1LQ9Y4W2 734 aaKnown RBP25.3■■□□□ 1.64
DDX54-207ENST00000550016 MTFR1LQ9H019 292 aa25.29■■□□□ 1.64
DDX54-207ENST00000550016 LAMB4A4D0S4 1761 aa25.28■■□□□ 1.64
DDX54-207ENST00000550016 ADRA2BP18089 450 aa25.28■■□□□ 1.64
DDX54-207ENST00000550016 TRAPPC3LQ5T215 181 aa25.28■■□□□ 1.64
DDX54-207ENST00000550016 CFAP44Q96MT7 982 aa25.28■■□□□ 1.64
DDX54-207ENST00000550016 USP16Q9Y5T5 823 aa25.28■■□□□ 1.64
DDX54-207ENST00000550016 COL24A1Q17RW2 1714 aa25.28■■□□□ 1.64
DDX54-207ENST00000550016 WWC1Q8IX03 1113 aa25.27■■□□□ 1.64
DDX54-207ENST00000550016 ATF5Q9Y2D1 282 aaPredicted RBP25.27■■□□□ 1.64
DDX54-207ENST00000550016 C4AP0C0L4 1744 aa25.26■■□□□ 1.63
DDX54-207ENST00000550016 PRAMEF22A3QJZ6 481 aa25.26■■□□□ 1.63
DDX54-207ENST00000550016 NGEFQ8N5V2 710 aa25.26■■□□□ 1.63
DDX54-207ENST00000550016 GIGYF1O75420 1035 aaPredicted RBP25.25■■□□□ 1.63
DDX54-207ENST00000550016 ARHGEF1Q92888 912 aaKnown RBP25.25■■□□□ 1.63
DDX54-207ENST00000550016 IFT57Q9NWB7 429 aa25.25■■□□□ 1.63
DDX54-207ENST00000550016 ZNF853P0CG23 659 aa25.24■■□□□ 1.63
DDX54-207ENST00000550016 GNAI1P63096 354 aa25.24■■□□□ 1.63
DDX54-207ENST00000550016 ZBTB1Q9Y2K1 713 aa25.24■■□□□ 1.63
DDX54-207ENST00000550016 SALL2Q9Y467 1007 aaPredicted RBP25.24■■□□□ 1.63
DDX54-207ENST00000550016 SOS1Q07889 1333 aaPredicted RBP25.23■■□□□ 1.63
DDX54-207ENST00000550016 A1BGP04217 495 aa25.23■■□□□ 1.63
DDX54-207ENST00000550016 CANXP27824 592 aaKnown RBP25.23■■□□□ 1.63
DDX54-207ENST00000550016 RFC4P35249 363 aa25.22■■□□□ 1.63
DDX54-207ENST00000550016 PTGER2P43116 358 aa25.21■■□□□ 1.63
DDX54-207ENST00000550016 MBIPQ9NS73 344 aa25.21■■□□□ 1.63
DDX54-207ENST00000550016 IL16Q14005 1332 aa25.19■■□□□ 1.62
DDX54-207ENST00000550016 EIF5P55010 431 aaKnown RBP25.19■■□□□ 1.62
DDX54-207ENST00000550016 WDR63Q8IWG1 891 aa25.19■■□□□ 1.62
DDX54-207ENST00000550016 SGIP1Q9BQI5 828 aa25.19■■□□□ 1.62
DDX54-207ENST00000550016 IL6STP40189 918 aaPredicted RBP25.18■■□□□ 1.62
DDX54-207ENST00000550016 MSL1Q68DK7 614 aa25.18■■□□□ 1.62
DDX54-207ENST00000550016 COL15A1P39059 1388 aa25.18■■□□□ 1.62
DDX54-207ENST00000550016 A0A087WZG4 1122 aa25.16■■□□□ 1.62
DDX54-207ENST00000550016 POLD1P28340 1107 aa25.16■■□□□ 1.62
DDX54-207ENST00000550016 USP42Q9H9J4 1324 aaKnown RBP25.15■■□□□ 1.62
DDX54-207ENST00000550016 ZPR1O75312 459 aa25.15■■□□□ 1.62
DDX54-207ENST00000550016 NPM2Q86SE8 214 aaKnown RBP25.15■■□□□ 1.62
DDX54-207ENST00000550016 PPP1R1BQ9UD71 204 aaPredicted RBP25.15■■□□□ 1.62
DDX54-207ENST00000550016 NBPF26B4DH59 902 aa25.14■■□□□ 1.62
DDX54-207ENST00000550016 GYS1P13807 737 aa25.14■■□□□ 1.62
DDX54-207ENST00000550016 PIP4K2AP48426 406 aaPredicted RBP25.14■■□□□ 1.62
DDX54-207ENST00000550016 KRT24Q2M2I5 525 aa25.14■■□□□ 1.62
DDX54-207ENST00000550016 NBPF10Q6P3W6 841 aaKnown RBP25.14■■□□□ 1.62
DDX54-207ENST00000550016 NLGN1Q8N2Q7 840 aa25.14■■□□□ 1.62
DDX54-207ENST00000550016 NBPF15Q8N660 670 aa25.14■■□□□ 1.62
DDX54-207ENST00000550016 SRP68Q9UHB9 627 aaKnown RBP25.14■■□□□ 1.62
DDX54-207ENST00000550016 NARFQ9UHQ1 456 aa25.14■■□□□ 1.62
DDX54-207ENST00000550016 ZNF330Q9Y3S2 320 aaPredicted RBP25.14■■□□□ 1.62
DDX54-207ENST00000550016 HOXB7P09629 217 aa25.12■■□□□ 1.61
DDX54-207ENST00000550016 EIF2S2P20042 333 aaKnown RBP25.12■■□□□ 1.61
DDX54-207ENST00000550016 ARXQ96QS3 562 aa25.12■■□□□ 1.61
DDX54-207ENST00000550016 ERBB4Q15303 1308 aa25.12■■□□□ 1.61
DDX54-207ENST00000550016 DUSP27Q5VZP5 1158 aa25.11■■□□□ 1.61
DDX54-207ENST00000550016 USPL1Q5W0Q7 1092 aa25.11■■□□□ 1.61
DDX54-207ENST00000550016 TSR2Q969E8 191 aaKnown RBP25.1■■□□□ 1.61
DDX54-207ENST00000550016 ZNF521Q96K83 1311 aa25.1■■□□□ 1.61
DDX54-207ENST00000550016 TBC1D2BQ9UPU7 963 aa25.09■■□□□ 1.61
DDX54-207ENST00000550016 BCORQ6W2J9 1755 aa25.08■■□□□ 1.61
DDX54-207ENST00000550016 SCN7AQ01118 1682 aa25.08■■□□□ 1.61
DDX54-207ENST00000550016 FKBP8Q14318 412 aa25.08■■□□□ 1.61
DDX54-207ENST00000550016 DZIP3Q86Y13 1208 aaKnown RBP25.08■■□□□ 1.61
DDX54-207ENST00000550016 MYL6BP14649 208 aa25.07■■□□□ 1.6
DDX54-207ENST00000550016 C8orf58Q8NAV2 365 aa25.07■■□□□ 1.6
DDX54-207ENST00000550016 NECTIN2Q92692 538 aa25.07■■□□□ 1.6
DDX54-207ENST00000550016 ELL2O00472 640 aaPredicted RBP25.06■■□□□ 1.6
DDX54-207ENST00000550016 MMP10P09238 476 aa25.06■■□□□ 1.6
DDX54-207ENST00000550016 HDGFL1Q5TGJ6 251 aa25.06■■□□□ 1.6
DDX54-207ENST00000550016 BCL2L12Q9HB09 334 aa25.06■■□□□ 1.6
DDX54-207ENST00000550016 SRCAPQ6ZRS2 3230 aa25.06■■□□□ 1.6
DDX54-207ENST00000550016 PDIA6Q15084 440 aa25.05■■□□□ 1.6
DDX54-207ENST00000550016 MYH16Q9H6N6 1097 aa25.05■■□□□ 1.6
DDX54-207ENST00000550016 SPINK5Q9NQ38 1064 aaPredicted RBP25.05■■□□□ 1.6
DDX54-207ENST00000550016 FANCIQ9NVI1 1328 aa25.05■■□□□ 1.6
DDX54-207ENST00000550016 NUP98P52948 1817 aa25.05■■□□□ 1.6
DDX54-207ENST00000550016 CAMTA2O94983 1202 aa25.04■■□□□ 1.6
DDX54-207ENST00000550016 GOLGA2Q08379 1002 aa25.04■■□□□ 1.6
DDX54-207ENST00000550016 TM4SF1P30408 202 aa25.03■■□□□ 1.6
DDX54-207ENST00000550016 CHMP4AQ9BY43 222 aa25.03■■□□□ 1.6
DDX54-207ENST00000550016 DDX21Q9NR30 783 aaKnown RBP eCLIP25.03■■□□□ 1.6
DDX54-207ENST00000550016 CACNA1FO60840 1977 aa25.03■■□□□ 1.6
DDX54-207ENST00000550016 TSPYL6Q8N831 410 aa25.02■■□□□ 1.6
DDX54-207ENST00000550016 PARP3Q9Y6F1 533 aa25.02■■□□□ 1.6
DDX54-207ENST00000550016 AFDNP55196 1824 aaKnown RBP25.02■■□□□ 1.6
DDX54-207ENST00000550016 PROSER3Q2NL68 480 aa25.01■■□□□ 1.59
DDX54-207ENST00000550016 LRP10Q7Z4F1 713 aa25.01■■□□□ 1.59
DDX54-207ENST00000550016 FHDC1Q9C0D6 1143 aaPredicted RBP25.01■■□□□ 1.59
DDX54-207ENST00000550016 CHPF2Q9P2E5 772 aa25.01■■□□□ 1.59
DDX54-207ENST00000550016 DBF4Q9UBU7 674 aaPredicted RBP25.01■■□□□ 1.59
DDX54-207ENST00000550016 RGL2O15211 777 aa25■■□□□ 1.59
DDX54-207ENST00000550016 ANXA1P04083 346 aa25■■□□□ 1.59
DDX54-207ENST00000550016 NFIXQ14938 502 aa25■■□□□ 1.59
DDX54-207ENST00000550016 TWISTNBQ3B726 338 aaPredicted RBP25■■□□□ 1.59
DDX54-207ENST00000550016 CLEC4GQ6UXB4 293 aa25■■□□□ 1.59
DDX54-207ENST00000550016 KIF6Q6ZMV9 814 aa24.99■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms