RNA–Protein interactions for RNA: ENST00000540912.1

AP003065.1-201, humanhuman

TSL 4 BASIC

Gene AP003065.1, Length 562 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003065.1-201ENST00000540912 CCER2I3L3R5 266 aa19.22■□□□□ 0.67
AP003065.1-201ENST00000540912 SNRPA1P09661 255 aaKnown RBP19.22■□□□□ 0.67
AP003065.1-201ENST00000540912 TRAPPC3LQ5T215 181 aa19.22■□□□□ 0.67
AP003065.1-201ENST00000540912 FAM9BQ8IZU0 186 aa19.22■□□□□ 0.67
AP003065.1-201ENST00000540912 SGIP1Q9BQI5 828 aa19.22■□□□□ 0.67
AP003065.1-201ENST00000540912 TSPYL4Q9UJ04 414 aa19.22■□□□□ 0.67
AP003065.1-201ENST00000540912 EIF4A1P60842 406 aaKnown RBP19.21■□□□□ 0.67
AP003065.1-201ENST00000540912 ARHGEF1Q92888 912 aaKnown RBP19.21■□□□□ 0.67
AP003065.1-201ENST00000540912 ZBTB1Q9Y2K1 713 aa19.21■□□□□ 0.67
AP003065.1-201ENST00000540912 SOS1Q07889 1333 aaPredicted RBP19.21■□□□□ 0.67
AP003065.1-201ENST00000540912 C4AP0C0L4 1744 aa19.2■□□□□ 0.66
AP003065.1-201ENST00000540912 NCBP3Q53F19 620 aaKnown RBP19.2■□□□□ 0.66
AP003065.1-201ENST00000540912 LAMB4A4D0S4 1761 aa19.19■□□□□ 0.66
AP003065.1-201ENST00000540912 PRAMEF22A3QJZ6 481 aa19.19■□□□□ 0.66
AP003065.1-201ENST00000540912 CHL1O00533 1208 aa19.19■□□□□ 0.66
AP003065.1-201ENST00000540912 CCDC27Q2M243 656 aa19.19■□□□□ 0.66
AP003065.1-201ENST00000540912 USP16Q9Y5T5 823 aa19.19■□□□□ 0.66
AP003065.1-201ENST00000540912 CALD1Q05682 793 aaKnown RBP19.18■□□□□ 0.66
AP003065.1-201ENST00000540912 GIGYF1O75420 1035 aaPredicted RBP19.17■□□□□ 0.66
AP003065.1-201ENST00000540912 CANXP27824 592 aaKnown RBP19.17■□□□□ 0.66
AP003065.1-201ENST00000540912 RFC4P35249 363 aa19.17■□□□□ 0.66
AP003065.1-201ENST00000540912 MSL1Q68DK7 614 aa19.17■□□□□ 0.66
AP003065.1-201ENST00000540912 CFAP44Q96MT7 982 aa19.17■□□□□ 0.66
AP003065.1-201ENST00000540912 PPP1R1BQ9UD71 204 aaPredicted RBP19.17■□□□□ 0.66
AP003065.1-201ENST00000540912 COL15A1P39059 1388 aa19.17■□□□□ 0.66
AP003065.1-201ENST00000540912 SENP3-EIF4A1A0A087X0R7 540 aa19.16■□□□□ 0.66
AP003065.1-201ENST00000540912 A1BGP04217 495 aa19.16■□□□□ 0.66
AP003065.1-201ENST00000540912 ZNF853P0CG23 659 aa19.16■□□□□ 0.66
AP003065.1-201ENST00000540912 POLD1P28340 1107 aa19.16■□□□□ 0.66
AP003065.1-201ENST00000540912 LAS1LQ9Y4W2 734 aaKnown RBP19.16■□□□□ 0.66
AP003065.1-201ENST00000540912 EIF5P55010 431 aaKnown RBP19.15■□□□□ 0.66
AP003065.1-201ENST00000540912 IFT57Q9NWB7 429 aa19.15■□□□□ 0.66
AP003065.1-201ENST00000540912 IL6STP40189 918 aaPredicted RBP19.14■□□□□ 0.65
AP003065.1-201ENST00000540912 WWC1Q8IX03 1113 aa19.14■□□□□ 0.65
AP003065.1-201ENST00000540912 MIER1Q8N108 512 aa19.14■□□□□ 0.65
AP003065.1-201ENST00000540912 ARXQ96QS3 562 aa19.14■□□□□ 0.65
AP003065.1-201ENST00000540912 USP42Q9H9J4 1324 aaKnown RBP19.14■□□□□ 0.65
AP003065.1-201ENST00000540912 GYS1P13807 737 aa19.13■□□□□ 0.65
AP003065.1-201ENST00000540912 GNAI1P63096 354 aa19.13■□□□□ 0.65
AP003065.1-201ENST00000540912 MBIPQ9NS73 344 aa19.13■□□□□ 0.65
AP003065.1-201ENST00000540912 SRP68Q9UHB9 627 aaKnown RBP19.13■□□□□ 0.65
AP003065.1-201ENST00000540912 A0A087WZG4 1122 aa19.12■□□□□ 0.65
AP003065.1-201ENST00000540912 NLGN1Q8N2Q7 840 aa19.12■□□□□ 0.65
AP003065.1-201ENST00000540912 NARFQ9UHQ1 456 aa19.12■□□□□ 0.65
AP003065.1-201ENST00000540912 NBPF26B4DH59 902 aa19.11■□□□□ 0.65
AP003065.1-201ENST00000540912 ZPR1O75312 459 aa19.11■□□□□ 0.65
AP003065.1-201ENST00000540912 NBPF10Q6P3W6 841 aaKnown RBP19.11■□□□□ 0.65
AP003065.1-201ENST00000540912 NGEFQ8N5V2 710 aa19.11■□□□□ 0.65
AP003065.1-201ENST00000540912 NBPF15Q8N660 670 aa19.11■□□□□ 0.65
AP003065.1-201ENST00000540912 IL16Q14005 1332 aa19.1■□□□□ 0.65
AP003065.1-201ENST00000540912 PIP4K2AP48426 406 aaPredicted RBP19.1■□□□□ 0.65
AP003065.1-201ENST00000540912 USPL1Q5W0Q7 1092 aa19.1■□□□□ 0.65
AP003065.1-201ENST00000540912 ZNF330Q9Y3S2 320 aaPredicted RBP19.1■□□□□ 0.65
AP003065.1-201ENST00000540912 SCN7AQ01118 1682 aa19.09■□□□□ 0.65
AP003065.1-201ENST00000540912 KRT24Q2M2I5 525 aa19.09■□□□□ 0.65
AP003065.1-201ENST00000540912 SALL2Q9Y467 1007 aaPredicted RBP19.09■□□□□ 0.65
AP003065.1-201ENST00000540912 ERBB4Q15303 1308 aa19.08■□□□□ 0.65
AP003065.1-201ENST00000540912 MMP10P09238 476 aa19.08■□□□□ 0.64
AP003065.1-201ENST00000540912 FKBP8Q14318 412 aa19.08■□□□□ 0.64
AP003065.1-201ENST00000540912 NPM2Q86SE8 214 aaKnown RBP19.08■□□□□ 0.64
AP003065.1-201ENST00000540912 FHDC1Q9C0D6 1143 aaPredicted RBP19.08■□□□□ 0.64
AP003065.1-201ENST00000540912 HOXB7P09629 217 aa19.07■□□□□ 0.64
AP003065.1-201ENST00000540912 WDR63Q8IWG1 891 aa19.07■□□□□ 0.64
AP003065.1-201ENST00000540912 BCL2L12Q9HB09 334 aa19.07■□□□□ 0.64
AP003065.1-201ENST00000540912 TBC1D2BQ9UPU7 963 aa19.07■□□□□ 0.64
AP003065.1-201ENST00000540912 EIF2S2P20042 333 aaKnown RBP19.06■□□□□ 0.64
AP003065.1-201ENST00000540912 DZIP3Q86Y13 1208 aaKnown RBP19.06■□□□□ 0.64
AP003065.1-201ENST00000540912 BCORQ6W2J9 1755 aa19.06■□□□□ 0.64
AP003065.1-201ENST00000540912 SYT17Q9BSW7 474 aa19.05■□□□□ 0.64
AP003065.1-201ENST00000540912 CAMTA2O94983 1202 aa19.04■□□□□ 0.64
AP003065.1-201ENST00000540912 TM4SF1P30408 202 aa19.04■□□□□ 0.64
AP003065.1-201ENST00000540912 DUSP27Q5VZP5 1158 aa19.04■□□□□ 0.64
AP003065.1-201ENST00000540912 TSR2Q969E8 191 aaKnown RBP19.04■□□□□ 0.64
AP003065.1-201ENST00000540912 ZNF521Q96K83 1311 aa19.03■□□□□ 0.64
AP003065.1-201ENST00000540912 MYL6BP14649 208 aa19.03■□□□□ 0.64
AP003065.1-201ENST00000540912 PDIA6Q15084 440 aa19.03■□□□□ 0.64
AP003065.1-201ENST00000540912 PARP3Q9Y6F1 533 aa19.03■□□□□ 0.64
AP003065.1-201ENST00000540912 DDR1Q08345 913 aa19.02■□□□□ 0.64
AP003065.1-201ENST00000540912 NFIXQ14938 502 aa19.02■□□□□ 0.64
AP003065.1-201ENST00000540912 HDGFL1Q5TGJ6 251 aa19.02■□□□□ 0.64
AP003065.1-201ENST00000540912 LRP10Q7Z4F1 713 aa19.02■□□□□ 0.64
AP003065.1-201ENST00000540912 KLHL34Q8N239 644 aa19.02■□□□□ 0.64
AP003065.1-201ENST00000540912 C8orf58Q8NAV2 365 aa19.02■□□□□ 0.64
AP003065.1-201ENST00000540912 NECTIN2Q92692 538 aa19.02■□□□□ 0.64
AP003065.1-201ENST00000540912 RGL2O15211 777 aa19.01■□□□□ 0.63
AP003065.1-201ENST00000540912 CD2APQ9Y5K6 639 aa19.01■□□□□ 0.63
AP003065.1-201ENST00000540912 FANCIQ9NVI1 1328 aa19■□□□□ 0.63
AP003065.1-201ENST00000540912 POLRMTO00411 1230 aaKnown RBP19■□□□□ 0.63
AP003065.1-201ENST00000540912 PROSER3Q2NL68 480 aa19■□□□□ 0.63
AP003065.1-201ENST00000540912 CLEC4GQ6UXB4 293 aa19■□□□□ 0.63
AP003065.1-201ENST00000540912 DDX21Q9NR30 783 aaKnown RBP eCLIP19■□□□□ 0.63
AP003065.1-201ENST00000540912 KIF13BQ9NQT8 1826 aa19■□□□□ 0.63
AP003065.1-201ENST00000540912 ELL2O00472 640 aaPredicted RBP18.99■□□□□ 0.63
AP003065.1-201ENST00000540912 ANXA1P04083 346 aa18.99■□□□□ 0.63
AP003065.1-201ENST00000540912 TBC1D9BQ66K14 1250 aa18.99■□□□□ 0.63
AP003065.1-201ENST00000540912 TTLL7Q6ZT98 887 aa18.99■□□□□ 0.63
AP003065.1-201ENST00000540912 SPINK5Q9NQ38 1064 aaPredicted RBP18.99■□□□□ 0.63
AP003065.1-201ENST00000540912 CHPF2Q9P2E5 772 aa18.99■□□□□ 0.63
AP003065.1-201ENST00000540912 ZNF652Q9Y2D9 606 aa18.99■□□□□ 0.63
AP003065.1-201ENST00000540912 C10orf71Q711Q0 1435 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms