RNA–Protein interactions for RNA: ENST00000538283.5

RAP1B-217, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 4

Gene RAP1B, Length 591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-217ENST00000538283 TSPYL4Q9UJ04 414 aa28.94■■■□□ 2.22
RAP1B-217ENST00000538283 BABAM1Q9NWV8 329 aa28.93■■■□□ 2.22
RAP1B-217ENST00000538283 SRCAPQ6ZRS2 3230 aa28.93■■■□□ 2.22
RAP1B-217ENST00000538283 CCER2I3L3R5 266 aa28.92■■■□□ 2.22
RAP1B-217ENST00000538283 SNRPA1P09661 255 aaKnown RBP28.92■■■□□ 2.22
RAP1B-217ENST00000538283 TRAPPC3LQ5T215 181 aa28.92■■■□□ 2.22
RAP1B-217ENST00000538283 PTGER2P43116 358 aa28.91■■■□□ 2.22
RAP1B-217ENST00000538283 ZBTB1Q9Y2K1 713 aa28.91■■■□□ 2.22
RAP1B-217ENST00000538283 EIF4A1P60842 406 aaKnown RBP28.9■■■□□ 2.22
RAP1B-217ENST00000538283 SOS1Q07889 1333 aaPredicted RBP28.9■■■□□ 2.22
RAP1B-217ENST00000538283 PRAMEF22A3QJZ6 481 aa28.89■■■□□ 2.22
RAP1B-217ENST00000538283 ARHGEF1Q92888 912 aaKnown RBP28.89■■■□□ 2.22
RAP1B-217ENST00000538283 SGIP1Q9BQI5 828 aa28.89■■■□□ 2.22
RAP1B-217ENST00000538283 SENP3-EIF4A1A0A087X0R7 540 aa28.88■■■□□ 2.21
RAP1B-217ENST00000538283 MSL1Q68DK7 614 aa28.88■■■□□ 2.21
RAP1B-217ENST00000538283 PPP1R1BQ9UD71 204 aaPredicted RBP28.88■■■□□ 2.21
RAP1B-217ENST00000538283 LAS1LQ9Y4W2 734 aaKnown RBP28.88■■■□□ 2.21
RAP1B-217ENST00000538283 COL15A1P39059 1388 aa28.88■■■□□ 2.21
RAP1B-217ENST00000538283 RFC4P35249 363 aa28.87■■■□□ 2.21
RAP1B-217ENST00000538283 CALD1Q05682 793 aaKnown RBP28.87■■■□□ 2.21
RAP1B-217ENST00000538283 USP16Q9Y5T5 823 aa28.87■■■□□ 2.21
RAP1B-217ENST00000538283 CHL1O00533 1208 aa28.86■■■□□ 2.21
RAP1B-217ENST00000538283 CANXP27824 592 aaKnown RBP28.86■■■□□ 2.21
RAP1B-217ENST00000538283 POLD1P28340 1107 aa28.85■■■□□ 2.21
RAP1B-217ENST00000538283 CCDC27Q2M243 656 aa28.85■■■□□ 2.21
RAP1B-217ENST00000538283 SCN7AQ01118 1682 aa28.85■■■□□ 2.21
RAP1B-217ENST00000538283 GIGYF1O75420 1035 aaPredicted RBP28.84■■■□□ 2.21
RAP1B-217ENST00000538283 CFAP44Q96MT7 982 aa28.84■■■□□ 2.21
RAP1B-217ENST00000538283 BCORQ6W2J9 1755 aa28.83■■■□□ 2.21
RAP1B-217ENST00000538283 A1BGP04217 495 aa28.83■■■□□ 2.21
RAP1B-217ENST00000538283 NCBP3Q53F19 620 aaKnown RBP28.83■■■□□ 2.21
RAP1B-217ENST00000538283 USP42Q9H9J4 1324 aaKnown RBP28.82■■■□□ 2.2
RAP1B-217ENST00000538283 MIER1Q8N108 512 aa28.81■■■□□ 2.2
RAP1B-217ENST00000538283 IFT57Q9NWB7 429 aa28.81■■■□□ 2.2
RAP1B-217ENST00000538283 IL6STP40189 918 aaPredicted RBP28.8■■■□□ 2.2
RAP1B-217ENST00000538283 EIF5P55010 431 aaKnown RBP28.8■■■□□ 2.2
RAP1B-217ENST00000538283 GNAI1P63096 354 aa28.8■■■□□ 2.2
RAP1B-217ENST00000538283 WWC1Q8IX03 1113 aa28.8■■■□□ 2.2
RAP1B-217ENST00000538283 ARXQ96QS3 562 aa28.8■■■□□ 2.2
RAP1B-217ENST00000538283 ZNF853P0CG23 659 aa28.79■■■□□ 2.2
RAP1B-217ENST00000538283 MBIPQ9NS73 344 aa28.79■■■□□ 2.2
RAP1B-217ENST00000538283 SRP68Q9UHB9 627 aaKnown RBP28.79■■■□□ 2.2
RAP1B-217ENST00000538283 ZNF330Q9Y3S2 320 aaPredicted RBP28.79■■■□□ 2.2
RAP1B-217ENST00000538283 GYS1P13807 737 aa28.78■■■□□ 2.2
RAP1B-217ENST00000538283 A0A087WZG4 1122 aa28.77■■■□□ 2.2
RAP1B-217ENST00000538283 ZPR1O75312 459 aa28.77■■■□□ 2.2
RAP1B-217ENST00000538283 PIP4K2AP48426 406 aaPredicted RBP28.77■■■□□ 2.2
RAP1B-217ENST00000538283 SALL2Q9Y467 1007 aaPredicted RBP28.77■■■□□ 2.2
RAP1B-217ENST00000538283 NPM2Q86SE8 214 aaKnown RBP28.76■■■□□ 2.19
RAP1B-217ENST00000538283 NLGN1Q8N2Q7 840 aa28.76■■■□□ 2.19
RAP1B-217ENST00000538283 NARFQ9UHQ1 456 aa28.76■■■□□ 2.19
RAP1B-217ENST00000538283 USPL1Q5W0Q7 1092 aa28.75■■■□□ 2.19
RAP1B-217ENST00000538283 NGEFQ8N5V2 710 aa28.75■■■□□ 2.19
RAP1B-217ENST00000538283 NBPF26B4DH59 902 aa28.74■■■□□ 2.19
RAP1B-217ENST00000538283 KRT24Q2M2I5 525 aa28.74■■■□□ 2.19
RAP1B-217ENST00000538283 NBPF10Q6P3W6 841 aaKnown RBP28.74■■■□□ 2.19
RAP1B-217ENST00000538283 NBPF15Q8N660 670 aa28.74■■■□□ 2.19
RAP1B-217ENST00000538283 IL16Q14005 1332 aa28.72■■■□□ 2.19
RAP1B-217ENST00000538283 FHDC1Q9C0D6 1143 aaPredicted RBP28.72■■■□□ 2.19
RAP1B-217ENST00000538283 ERBB4Q15303 1308 aa28.71■■■□□ 2.19
RAP1B-217ENST00000538283 AFDNP55196 1824 aaKnown RBP28.71■■■□□ 2.19
RAP1B-217ENST00000538283 KIF13BQ9NQT8 1826 aa28.71■■■□□ 2.19
RAP1B-217ENST00000538283 MMP10P09238 476 aa28.71■■■□□ 2.19
RAP1B-217ENST00000538283 FKBP8Q14318 412 aa28.71■■■□□ 2.19
RAP1B-217ENST00000538283 EIF2S2P20042 333 aaKnown RBP28.7■■■□□ 2.18
RAP1B-217ENST00000538283 TBC1D2BQ9UPU7 963 aa28.7■■■□□ 2.18
RAP1B-217ENST00000538283 HOXB7P09629 217 aa28.69■■■□□ 2.18
RAP1B-217ENST00000538283 DZIP3Q86Y13 1208 aaKnown RBP28.69■■■□□ 2.18
RAP1B-217ENST00000538283 WDR63Q8IWG1 891 aa28.69■■■□□ 2.18
RAP1B-217ENST00000538283 KLHL34Q8N239 644 aa28.69■■■□□ 2.18
RAP1B-217ENST00000538283 NUP98P52948 1817 aa28.69■■■□□ 2.18
RAP1B-217ENST00000538283 BCL2L12Q9HB09 334 aa28.68■■■□□ 2.18
RAP1B-217ENST00000538283 TSR2Q969E8 191 aaKnown RBP28.67■■■□□ 2.18
RAP1B-217ENST00000538283 NRXN2Q9P2S2 1712 aa28.66■■■□□ 2.18
RAP1B-217ENST00000538283 MYL6BP14649 208 aa28.66■■■□□ 2.18
RAP1B-217ENST00000538283 DUSP27Q5VZP5 1158 aa28.66■■■□□ 2.18
RAP1B-217ENST00000538283 CAMTA2O94983 1202 aa28.65■■■□□ 2.18
RAP1B-217ENST00000538283 NECTIN2Q92692 538 aa28.65■■■□□ 2.18
RAP1B-217ENST00000538283 SYT17Q9BSW7 474 aa28.65■■■□□ 2.18
RAP1B-217ENST00000538283 PARP3Q9Y6F1 533 aa28.65■■■□□ 2.18
RAP1B-217ENST00000538283 HDGFL1Q5TGJ6 251 aa28.64■■■□□ 2.18
RAP1B-217ENST00000538283 TM4SF1P30408 202 aa28.62■■■□□ 2.17
RAP1B-217ENST00000538283 DDR1Q08345 913 aa28.62■■■□□ 2.17
RAP1B-217ENST00000538283 PDIA6Q15084 440 aa28.62■■■□□ 2.17
RAP1B-217ENST00000538283 ZNF521Q96K83 1311 aa28.62■■■□□ 2.17
RAP1B-217ENST00000538283 KIAA1551Q9HCM1 1747 aa28.61■■■□□ 2.17
RAP1B-217ENST00000538283 NFIXQ14938 502 aa28.61■■■□□ 2.17
RAP1B-217ENST00000538283 C8orf58Q8NAV2 365 aa28.61■■■□□ 2.17
RAP1B-217ENST00000538283 FANCIQ9NVI1 1328 aa28.61■■■□□ 2.17
RAP1B-217ENST00000538283 ANKRD36CQ5JPF3 1778 aa28.6■■■□□ 2.17
RAP1B-217ENST00000538283 POLRMTO00411 1230 aaKnown RBP28.6■■■□□ 2.17
RAP1B-217ENST00000538283 ELL2O00472 640 aaPredicted RBP28.6■■■□□ 2.17
RAP1B-217ENST00000538283 PROSER3Q2NL68 480 aa28.6■■■□□ 2.17
RAP1B-217ENST00000538283 CD2APQ9Y5K6 639 aa28.6■■■□□ 2.17
RAP1B-217ENST00000538283 C10orf71Q711Q0 1435 aa28.6■■■□□ 2.17
RAP1B-217ENST00000538283 ANXA1P04083 346 aa28.59■■■□□ 2.17
RAP1B-217ENST00000538283 TBC1D9BQ66K14 1250 aa28.59■■■□□ 2.17
RAP1B-217ENST00000538283 LRP10Q7Z4F1 713 aa28.59■■■□□ 2.17
RAP1B-217ENST00000538283 DDX21Q9NR30 783 aaKnown RBP eCLIP28.59■■■□□ 2.17
RAP1B-217ENST00000538283 ZNF652Q9Y2D9 606 aa28.59■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms