RNA–Protein interactions for RNA: ENST00000525840.1

CHID1-209, Transcript of chitinase domain containing 1, humanhuman

TSL 3

Gene CHID1, Length 438 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHID1-209ENST00000525840 SLC4A9Q96Q91 983 aa12.35□□□□□ -0.43
CHID1-209ENST00000525840 MTFR1LQ9H019 292 aa12.35□□□□□ -0.43
CHID1-209ENST00000525840 SPON1Q9HCB6 807 aa12.35□□□□□ -0.43
CHID1-209ENST00000525840 CCDC87Q9NVE4 849 aa12.35□□□□□ -0.43
CHID1-209ENST00000525840 IL16Q14005 1332 aa12.35□□□□□ -0.43
CHID1-209ENST00000525840 A0A087WZG4 1122 aa12.34□□□□□ -0.43
CHID1-209ENST00000525840 CHL1O00533 1208 aa12.34□□□□□ -0.43
CHID1-209ENST00000525840 EIF4A1P60842 406 aaKnown RBP12.34□□□□□ -0.43
CHID1-209ENST00000525840 WDR63Q8IWG1 891 aa12.34□□□□□ -0.43
CHID1-209ENST00000525840 WWC1Q8IX03 1113 aa12.34□□□□□ -0.43
CHID1-209ENST00000525840 MYH14Q7Z406 1995 aaKnown RBP12.34□□□□□ -0.43
CHID1-209ENST00000525840 PNPLA7Q6ZV29 1317 aa12.34□□□□□ -0.43
CHID1-209ENST00000525840 LRP5O75197 1615 aa12.33□□□□□ -0.43
CHID1-209ENST00000525840 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.33□□□□□ -0.44
CHID1-209ENST00000525840 RFC4P35249 363 aa12.33□□□□□ -0.44
CHID1-209ENST00000525840 MIS18AQ9NYP9 233 aa12.33□□□□□ -0.44
CHID1-209ENST00000525840 SOS1Q07889 1333 aaPredicted RBP12.33□□□□□ -0.44
CHID1-209ENST00000525840 KCNQ3O43525 872 aa12.32□□□□□ -0.44
CHID1-209ENST00000525840 GIGYF1O75420 1035 aaPredicted RBP12.32□□□□□ -0.44
CHID1-209ENST00000525840 PHF14O94880 888 aa12.32□□□□□ -0.44
CHID1-209ENST00000525840 HOXB7P09629 217 aa12.32□□□□□ -0.44
CHID1-209ENST00000525840 POLD1P28340 1107 aa12.32□□□□□ -0.44
CHID1-209ENST00000525840 IL6STP40189 918 aaPredicted RBP12.32□□□□□ -0.44
CHID1-209ENST00000525840 ERBB4Q15303 1308 aa12.32□□□□□ -0.44
CHID1-209ENST00000525840 INTS5Q6P9B9 1019 aaKnown RBP12.31□□□□□ -0.44
CHID1-209ENST00000525840 COL23A1Q86Y22 540 aaPredicted RBP12.31□□□□□ -0.44
CHID1-209ENST00000525840 C4AP0C0L4 1744 aa12.31□□□□□ -0.44
CHID1-209ENST00000525840 ZPR1O75312 459 aa12.3□□□□□ -0.44
CHID1-209ENST00000525840 ZNF853P0CG23 659 aa12.3□□□□□ -0.44
CHID1-209ENST00000525840 CANXP27824 592 aaKnown RBP12.3□□□□□ -0.44
CHID1-209ENST00000525840 NLGN1Q8N2Q7 840 aa12.3□□□□□ -0.44
CHID1-209ENST00000525840 MYH16Q9H6N6 1097 aa12.3□□□□□ -0.44
CHID1-209ENST00000525840 PPP1R1BQ9UD71 204 aaPredicted RBP12.3□□□□□ -0.44
CHID1-209ENST00000525840 SALL2Q9Y467 1007 aaPredicted RBP12.3□□□□□ -0.44
CHID1-209ENST00000525840 USP16Q9Y5T5 823 aa12.3□□□□□ -0.44
CHID1-209ENST00000525840 COL24A1Q17RW2 1714 aa12.3□□□□□ -0.44
CHID1-209ENST00000525840 COL15A1P39059 1388 aa12.3□□□□□ -0.44
CHID1-209ENST00000525840 ZBTB7AO95365 584 aa12.29□□□□□ -0.44
CHID1-209ENST00000525840 ARHGEF1Q92888 912 aaKnown RBP12.29□□□□□ -0.44
CHID1-209ENST00000525840 MBIPQ9NS73 344 aa12.29□□□□□ -0.44
CHID1-209ENST00000525840 ZBTB1Q9Y2K1 713 aa12.29□□□□□ -0.44
CHID1-209ENST00000525840 A1BGP04217 495 aa12.28□□□□□ -0.44
CHID1-209ENST00000525840 PRKCSHP14314 528 aaPredicted RBP12.28□□□□□ -0.44
CHID1-209ENST00000525840 EIF5P55010 431 aaKnown RBP12.28□□□□□ -0.44
CHID1-209ENST00000525840 GOLGA2Q08379 1002 aa12.28□□□□□ -0.44
CHID1-209ENST00000525840 RGL2O15211 777 aa12.27□□□□□ -0.45
CHID1-209ENST00000525840 NARFQ9UHQ1 456 aa12.27□□□□□ -0.45
CHID1-209ENST00000525840 ATF5Q9Y2D1 282 aaPredicted RBP12.27□□□□□ -0.45
CHID1-209ENST00000525840 ZNF652Q9Y2D9 606 aa12.27□□□□□ -0.45
CHID1-209ENST00000525840 ZNF330Q9Y3S2 320 aaPredicted RBP12.27□□□□□ -0.45
CHID1-209ENST00000525840 USP42Q9H9J4 1324 aaKnown RBP12.27□□□□□ -0.45
CHID1-209ENST00000525840 EIF2S2P20042 333 aaKnown RBP12.26□□□□□ -0.45
CHID1-209ENST00000525840 HDGFL1Q5TGJ6 251 aa12.26□□□□□ -0.45
CHID1-209ENST00000525840 ARXQ96QS3 562 aa12.26□□□□□ -0.45
CHID1-209ENST00000525840 PDGFDQ9GZP0 370 aaPredicted RBP12.26□□□□□ -0.45
CHID1-209ENST00000525840 DAXXQ9UER7 740 aaPredicted RBP12.26□□□□□ -0.45
CHID1-209ENST00000525840 CACNA1FO60840 1977 aa12.26□□□□□ -0.45
CHID1-209ENST00000525840 PRAMEF22A3QJZ6 481 aa12.25□□□□□ -0.45
CHID1-209ENST00000525840 E9PSI1 815 aa12.25□□□□□ -0.45
CHID1-209ENST00000525840 CCDC30Q5VVM6 783 aa12.25□□□□□ -0.45
CHID1-209ENST00000525840 DUSP27Q5VZP5 1158 aa12.25□□□□□ -0.45
CHID1-209ENST00000525840 KIF6Q6ZMV9 814 aa12.25□□□□□ -0.45
CHID1-209ENST00000525840 DZIP3Q86Y13 1208 aaKnown RBP12.25□□□□□ -0.45
CHID1-209ENST00000525840 DBF4Q9UBU7 674 aaPredicted RBP12.25□□□□□ -0.45
CHID1-209ENST00000525840 SCN7AQ01118 1682 aa12.25□□□□□ -0.45
CHID1-209ENST00000525840 BCORQ6W2J9 1755 aa12.25□□□□□ -0.45
CHID1-209ENST00000525840 GYS1P13807 737 aa12.24□□□□□ -0.45
CHID1-209ENST00000525840 CLEC4GQ6UXB4 293 aa12.24□□□□□ -0.45
CHID1-209ENST00000525840 DDX21Q9NR30 783 aaKnown RBP eCLIP12.24□□□□□ -0.45
CHID1-209ENST00000525840 ZNF521Q96K83 1311 aa12.23□□□□□ -0.45
CHID1-209ENST00000525840 FANCIQ9NVI1 1328 aa12.23□□□□□ -0.45
CHID1-209ENST00000525840 SENP3-EIF4A1A0A087X0R7 540 aa12.23□□□□□ -0.45
CHID1-209ENST00000525840 MYL6BP14649 208 aa12.23□□□□□ -0.45
CHID1-209ENST00000525840 TWISTNBQ3B726 338 aaPredicted RBP12.23□□□□□ -0.45
CHID1-209ENST00000525840 USPL1Q5W0Q7 1092 aa12.23□□□□□ -0.45
CHID1-209ENST00000525840 AMIGO3Q86WK7 504 aa12.23□□□□□ -0.45
CHID1-209ENST00000525840 TSR2Q969E8 191 aaKnown RBP12.23□□□□□ -0.45
CHID1-209ENST00000525840 STK31Q9BXU1 1019 aa12.23□□□□□ -0.45
CHID1-209ENST00000525840 HYPKQ9NX55 129 aa12.23□□□□□ -0.45
CHID1-209ENST00000525840 PARP3Q9Y6F1 533 aa12.23□□□□□ -0.45
CHID1-209ENST00000525840 ERVV-1B6SEH8 477 aa12.22□□□□□ -0.45
CHID1-209ENST00000525840 PTGER2P43116 358 aa12.22□□□□□ -0.45
CHID1-209ENST00000525840 HNRNPUQ00839 825 aaKnown RBP eCLIP12.22□□□□□ -0.45
CHID1-209ENST00000525840 MSL1Q68DK7 614 aa12.22□□□□□ -0.45
CHID1-209ENST00000525840 SGIP1Q9BQI5 828 aa12.22□□□□□ -0.45
CHID1-209ENST00000525840 NBPF26B4DH59 902 aa12.21□□□□□ -0.45
CHID1-209ENST00000525840 ELL2O00472 640 aaPredicted RBP12.21□□□□□ -0.45
CHID1-209ENST00000525840 MMP10P09238 476 aa12.21□□□□□ -0.45
CHID1-209ENST00000525840 NBPF10Q6P3W6 841 aaKnown RBP12.21□□□□□ -0.45
CHID1-209ENST00000525840 SMIM5Q71RC9 77 aa12.21□□□□□ -0.45
CHID1-209ENST00000525840 NBPF15Q8N660 670 aa12.21□□□□□ -0.45
CHID1-209ENST00000525840 SRP68Q9UHB9 627 aaKnown RBP12.21□□□□□ -0.45
CHID1-209ENST00000525840 TBC1D2BQ9UPU7 963 aa12.21□□□□□ -0.45
CHID1-209ENST00000525840 NUP98P52948 1817 aa12.21□□□□□ -0.46
CHID1-209ENST00000525840 MAP3K15Q6ZN16 1313 aa12.2□□□□□ -0.46
CHID1-209ENST00000525840 DCAF8L1A6NGE4 600 aa12.2□□□□□ -0.46
CHID1-209ENST00000525840 NPM3O75607 178 aaKnown RBP12.2□□□□□ -0.46
CHID1-209ENST00000525840 DDX58O95786 925 aaKnown RBP12.2□□□□□ -0.46
CHID1-209ENST00000525840 KRT24Q2M2I5 525 aa12.2□□□□□ -0.46
CHID1-209ENST00000525840 HSP90AB3PQ58FF7 597 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms