RNA–Protein interactions for RNA: ENST00000522771.6

MEG3-220, Transcript of maternally expressed 3, humanhuman

TSL 5 BASIC

Gene MEG3, Length 6,984 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEG3-220ENST00000522771 UVSSAQ2YD98 709 aa12.58□□□□□ -0.4
MEG3-220ENST00000522771 IPO4Q8TEX9 1081 aaKnown RBP12.58□□□□□ -0.4
MEG3-220ENST00000522771 SMARCC1Q92922 1105 aaPredicted RBP12.58□□□□□ -0.4
MEG3-220ENST00000522771 STRN4Q9NRL3 753 aa12.58□□□□□ -0.4
MEG3-220ENST00000522771 LRP2BPQ9P2M1 347 aa12.58□□□□□ -0.4
MEG3-220ENST00000522771 BMS1Q14692 1282 aaKnown RBP12.57□□□□□ -0.4
MEG3-220ENST00000522771 AQRO60306 1485 aaKnown RBP eCLIP12.57□□□□□ -0.4
MEG3-220ENST00000522771 POTEB2H3BUK9 544 aa12.57□□□□□ -0.4
MEG3-220ENST00000522771 CCDC91Q7Z6B0 441 aa12.57□□□□□ -0.4
MEG3-220ENST00000522771 USP5P45974 858 aa12.57□□□□□ -0.4
MEG3-220ENST00000522771 CCT2P78371 535 aaKnown RBP12.57□□□□□ -0.4
MEG3-220ENST00000522771 ISM2Q6H9L7 571 aa12.57□□□□□ -0.4
MEG3-220ENST00000522771 UBE2HP62256 183 aa12.57□□□□□ -0.4
MEG3-220ENST00000522771 SPG7Q9UQ90 795 aa12.57□□□□□ -0.4
MEG3-220ENST00000522771 CLCN1P35523 988 aa12.57□□□□□ -0.4
MEG3-220ENST00000522771 MATR3P43243 847 aaKnown RBP eCLIP12.57□□□□□ -0.4
MEG3-220ENST00000522771 GIMAP6Q6P9H5 292 aa12.57□□□□□ -0.4
MEG3-220ENST00000522771 TIGD1Q96MW7 591 aa12.57□□□□□ -0.4
MEG3-220ENST00000522771 TRIM27P14373 513 aa12.56□□□□□ -0.4
MEG3-220ENST00000522771 PANK2Q9BZ23 570 aa12.56□□□□□ -0.4
MEG3-220ENST00000522771 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.56□□□□□ -0.4
MEG3-220ENST00000522771 XRCC6P12956 609 aaKnown RBP eCLIP12.56□□□□□ -0.4
MEG3-220ENST00000522771 HCLS1P14317 486 aaPredicted RBP12.56□□□□□ -0.4
MEG3-220ENST00000522771 ZNF76P36508 570 aa12.56□□□□□ -0.4
MEG3-220ENST00000522771 PAFAH1B1P43034 410 aa12.56□□□□□ -0.4
MEG3-220ENST00000522771 TSG101Q99816 390 aa12.56□□□□□ -0.4
MEG3-220ENST00000522771 F6X3S4 739 aa12.56□□□□□ -0.4
MEG3-220ENST00000522771 YEATS4O95619 227 aa12.56□□□□□ -0.4
MEG3-220ENST00000522771 SYNJ2O15056 1496 aa12.56□□□□□ -0.4
MEG3-220ENST00000522771 USO1O60763 962 aaKnown RBP12.55□□□□□ -0.4
MEG3-220ENST00000522771 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.55□□□□□ -0.4
MEG3-220ENST00000522771 CCDC8Q9H0W5 538 aaPredicted RBP12.55□□□□□ -0.4
MEG3-220ENST00000522771 KLHL34Q8N239 644 aa12.55□□□□□ -0.4
MEG3-220ENST00000522771 KRI1Q8N9T8 703 aaKnown RBP12.55□□□□□ -0.4
MEG3-220ENST00000522771 ZSWIM4Q9H7M6 989 aa12.55□□□□□ -0.4
MEG3-220ENST00000522771 HMGB1P09429 215 aaKnown RBP12.55□□□□□ -0.4
MEG3-220ENST00000522771 ZNF165P49910 485 aa12.55□□□□□ -0.4
MEG3-220ENST00000522771 NOLC1Q14978 699 aaKnown RBP eCLIP12.54□□□□□ -0.4
MEG3-220ENST00000522771 KRT222Q8N1A0 295 aa12.54□□□□□ -0.4
MEG3-220ENST00000522771 ATAD2Q6PL18 1390 aa12.54□□□□□ -0.4
MEG3-220ENST00000522771 FAM69CQ0P6D2 419 aa12.54□□□□□ -0.4
MEG3-220ENST00000522771 CCDC82Q8N4S0 544 aa12.54□□□□□ -0.4
MEG3-220ENST00000522771 GCOM1H8Y6P7 765 aaPredicted RBP12.54□□□□□ -0.4
MEG3-220ENST00000522771 MYZAPP0CAP1 466 aa12.54□□□□□ -0.4
MEG3-220ENST00000522771 SSRP1Q08945 709 aaKnown RBP12.54□□□□□ -0.4
MEG3-220ENST00000522771 BMP2KLQ5H9B9 411 aa12.54□□□□□ -0.4
MEG3-220ENST00000522771 MINDY4BA8MYZ0 360 aa12.54□□□□□ -0.4
MEG3-220ENST00000522771 LIG1P18858 919 aa12.54□□□□□ -0.4
MEG3-220ENST00000522771 CCDC150Q8NCX0 1101 aa12.54□□□□□ -0.4
MEG3-220ENST00000522771 METTL24Q5JXM2 366 aa12.53□□□□□ -0.4
MEG3-220ENST00000522771 CCDC171Q6TFL3 1326 aa12.53□□□□□ -0.4
MEG3-220ENST00000522771 GOLGA8BA8MQT2 603 aa12.53□□□□□ -0.4
MEG3-220ENST00000522771 RBM25P49756 843 aaKnown RBP12.53□□□□□ -0.4
MEG3-220ENST00000522771 HLTFQ14527 1009 aaKnown RBP eCLIP12.53□□□□□ -0.4
MEG3-220ENST00000522771 CCDC12Q8WUD4 166 aaPredicted RBP12.53□□□□□ -0.4
MEG3-220ENST00000522771 PRG4Q92954 1404 aaPredicted RBP12.53□□□□□ -0.4
MEG3-220ENST00000522771 IFIT1P09914 478 aaKnown RBP12.53□□□□□ -0.4
MEG3-220ENST00000522771 TDRD12Q587J7 1177 aaKnown RBP12.53□□□□□ -0.4
MEG3-220ENST00000522771 PPP1R12BO60237 982 aaPredicted RBP12.53□□□□□ -0.4
MEG3-220ENST00000522771 GNG11P61952 73 aa12.53□□□□□ -0.4
MEG3-220ENST00000522771 TSHZ3Q63HK5 1081 aa12.53□□□□□ -0.4
MEG3-220ENST00000522771 NAIPQ13075 1403 aa12.53□□□□□ -0.4
MEG3-220ENST00000522771 ABCC11Q96J66 1382 aa12.53□□□□□ -0.4
MEG3-220ENST00000522771 GOLGA6L9A6NEM1 432 aa12.53□□□□□ -0.4
MEG3-220ENST00000522771 RBM5P52756 815 aaKnown RBP eCLIP12.53□□□□□ -0.4
MEG3-220ENST00000522771 UBE4AQ14139 1066 aa12.53□□□□□ -0.4
MEG3-220ENST00000522771 TTC22Q5TAA0 569 aa12.52□□□□□ -0.4
MEG3-220ENST00000522771 SLC12A7Q9Y666 1083 aa12.52□□□□□ -0.4
MEG3-220ENST00000522771 MYD88Q99836 296 aa12.52□□□□□ -0.4
MEG3-220ENST00000522771 ABCF2Q9UG63 623 aa12.52□□□□□ -0.4
MEG3-220ENST00000522771 MAATS1Q7Z4T9 603 aa12.52□□□□□ -0.41
MEG3-220ENST00000522771 PHAXQ9H814 394 aaKnown RBP12.52□□□□□ -0.41
MEG3-220ENST00000522771 PTPN23Q9H3S7 1636 aa12.52□□□□□ -0.41
MEG3-220ENST00000522771 GSTTP1A0A1W2PQM5 241 aa12.52□□□□□ -0.41
MEG3-220ENST00000522771 ZNF213O14771 459 aa12.52□□□□□ -0.41
MEG3-220ENST00000522771 SPECC1Q5M775 1068 aa12.52□□□□□ -0.41
MEG3-220ENST00000522771 TOM1L2Q6ZVM7 507 aa12.52□□□□□ -0.41
MEG3-220ENST00000522771 ALS2CR12Q96Q35 445 aa12.52□□□□□ -0.41
MEG3-220ENST00000522771 SEC63Q9UGP8 760 aaKnown RBP12.52□□□□□ -0.41
MEG3-220ENST00000522771 CNPY2Q9Y2B0 182 aa12.52□□□□□ -0.41
MEG3-220ENST00000522771 CCDC175P0C221 793 aa12.52□□□□□ -0.41
MEG3-220ENST00000522771 ANO6Q4KMQ2 910 aa12.52□□□□□ -0.41
MEG3-220ENST00000522771 AKAP2Q9Y2D5 859 aa12.52□□□□□ -0.41
MEG3-220ENST00000522771 FGFR1OPO95684 399 aaKnown RBP12.51□□□□□ -0.41
MEG3-220ENST00000522771 POLR3DP05423 398 aaPredicted RBP12.51□□□□□ -0.41
MEG3-220ENST00000522771 VPS36Q86VN1 386 aa12.51□□□□□ -0.41
MEG3-220ENST00000522771 UBA5Q9GZZ9 404 aa12.51□□□□□ -0.41
MEG3-220ENST00000522771 SMC1AQ14683 1233 aaKnown RBP12.51□□□□□ -0.41
MEG3-220ENST00000522771 NAPBQ9H115 298 aa12.51□□□□□ -0.41
MEG3-220ENST00000522771 GTF2A1P52655 376 aaPredicted RBP12.51□□□□□ -0.41
MEG3-220ENST00000522771 CTNNBL1Q8WYA6 563 aaPredicted RBP12.51□□□□□ -0.41
MEG3-220ENST00000522771 TMX3Q96JJ7 454 aa12.51□□□□□ -0.41
MEG3-220ENST00000522771 NAA15Q9BXJ9 866 aaKnown RBP12.51□□□□□ -0.41
MEG3-220ENST00000522771 NCOA1Q15788 1441 aa12.51□□□□□ -0.41
MEG3-220ENST00000522771 CCDC196A0A1B0GTZ2 297 aa12.51□□□□□ -0.41
MEG3-220ENST00000522771 ZSCAN22P10073 491 aaPredicted RBP12.51□□□□□ -0.41
MEG3-220ENST00000522771 USP48Q86UV5 1035 aa12.51□□□□□ -0.41
MEG3-220ENST00000522771 CCDC144CPQ8IYA2 1237 aa12.51□□□□□ -0.41
MEG3-220ENST00000522771 JADE2Q9NQC1 790 aa12.51□□□□□ -0.41
MEG3-220ENST00000522771 POTEJP0CG39 1038 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms