RNA–Protein interactions for RNA: ENST00000516211.1

SCARNA17.1-201, small Cajal body-specific RNA 17, humanhuman

BASIC

Gene SCARNA17, Length 143 nt, Biotype scaRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA17.1-201ENST00000516211 DHX38Q92620 1227 aaKnown RBP3.83□□□□□ -1.8
SCARNA17.1-201ENST00000516211 UNC93B1Q9H1C4 597 aa3.83□□□□□ -1.8
SCARNA17.1-201ENST00000516211 CWC22Q9HCG8 908 aaKnown RBP3.83□□□□□ -1.8
SCARNA17.1-201ENST00000516211 PCDH10Q9P2E7 1040 aa3.83□□□□□ -1.8
SCARNA17.1-201ENST00000516211 IQSEC3Q9UPP2 1182 aaPredicted RBP3.83□□□□□ -1.8
SCARNA17.1-201ENST00000516211 EPB41L3Q9Y2J2 1087 aaPredicted RBP3.83□□□□□ -1.8
SCARNA17.1-201ENST00000516211 TOPBP1Q92547 1522 aa3.83□□□□□ -1.8
SCARNA17.1-201ENST00000516211 SYNJ1O43426 1573 aa3.83□□□□□ -1.8
SCARNA17.1-201ENST00000516211 CEP170Q5SW79 1584 aa3.83□□□□□ -1.8
SCARNA17.1-201ENST00000516211 MROH2BQ7Z745 1585 aa3.83□□□□□ -1.8
SCARNA17.1-201ENST00000516211 ZCCHC6Q5VYS8 1495 aaKnown RBP3.82□□□□□ -1.8
SCARNA17.1-201ENST00000516211 LGR5O75473 907 aa3.82□□□□□ -1.8
SCARNA17.1-201ENST00000516211 MMP16P51512 607 aa3.82□□□□□ -1.8
SCARNA17.1-201ENST00000516211 NFE2L2Q16236 605 aa3.82□□□□□ -1.8
SCARNA17.1-201ENST00000516211 ECM1Q16610 540 aa3.82□□□□□ -1.8
SCARNA17.1-201ENST00000516211 CCDC144BQ3MJ40 725 aa3.82□□□□□ -1.8
SCARNA17.1-201ENST00000516211 RNF187Q5TA31 235 aaPredicted RBP3.82□□□□□ -1.8
SCARNA17.1-201ENST00000516211 SDE2Q6IQ49 451 aa3.82□□□□□ -1.8
SCARNA17.1-201ENST00000516211 METTL16Q86W50 562 aaKnown RBP3.82□□□□□ -1.8
SCARNA17.1-201ENST00000516211 SERBP1Q8NC51 408 aaKnown RBP eCLIP3.82□□□□□ -1.8
SCARNA17.1-201ENST00000516211 ALKBH8Q96BT7 664 aaKnown RBP3.82□□□□□ -1.8
SCARNA17.1-201ENST00000516211 THAP11Q96EK4 314 aa3.82□□□□□ -1.8
SCARNA17.1-201ENST00000516211 SPSB2Q99619 263 aa3.82□□□□□ -1.8
SCARNA17.1-201ENST00000516211 OCSTAMPQ9BR26 566 aa3.82□□□□□ -1.8
SCARNA17.1-201ENST00000516211 ZSWIM4Q9H7M6 989 aa3.82□□□□□ -1.8
SCARNA17.1-201ENST00000516211 ZNF358Q9NW07 568 aa3.82□□□□□ -1.8
SCARNA17.1-201ENST00000516211 STIM2Q9P246 746 aa3.82□□□□□ -1.8
SCARNA17.1-201ENST00000516211 SPG7Q9UQ90 795 aa3.82□□□□□ -1.8
SCARNA17.1-201ENST00000516211 VPS9D1Q9Y2B5 631 aa3.82□□□□□ -1.8
SCARNA17.1-201ENST00000516211 TOP2BQ02880 1626 aa3.81□□□□□ -1.8
SCARNA17.1-201ENST00000516211 DCAF1Q9Y4B6 1507 aa3.81□□□□□ -1.8
SCARNA17.1-201ENST00000516211 ATAD2Q6PL18 1390 aa3.81□□□□□ -1.8
SCARNA17.1-201ENST00000516211 hCG_2014768A0A024R1R8 64 aa3.81□□□□□ -1.8
SCARNA17.1-201ENST00000516211 PNMA6FA0A0J9YX94 578 aa3.81□□□□□ -1.8
SCARNA17.1-201ENST00000516211 PPP1R12BO60237 982 aaPredicted RBP3.81□□□□□ -1.8
SCARNA17.1-201ENST00000516211 GNA15P30679 374 aa3.81□□□□□ -1.8
SCARNA17.1-201ENST00000516211 EIF1AXP47813 144 aaKnown RBP3.81□□□□□ -1.8
SCARNA17.1-201ENST00000516211 ANAPC15P60006 121 aa3.81□□□□□ -1.8
SCARNA17.1-201ENST00000516211 IGBP1P78318 339 aa3.81□□□□□ -1.8
SCARNA17.1-201ENST00000516211 DSC3Q14574 896 aa3.81□□□□□ -1.8
SCARNA17.1-201ENST00000516211 ERFEQ4G0M1 354 aa3.81□□□□□ -1.8
SCARNA17.1-201ENST00000516211 HS2ST1Q7LGA3 356 aa3.81□□□□□ -1.8
SCARNA17.1-201ENST00000516211 CRELD1Q96HD1 420 aa3.81□□□□□ -1.8
SCARNA17.1-201ENST00000516211 MRFAP1L1Q96HT8 127 aa3.81□□□□□ -1.8
SCARNA17.1-201ENST00000516211 FAM161BQ96MY7 647 aa3.81□□□□□ -1.8
SCARNA17.1-201ENST00000516211 GMLQ99445 158 aa3.81□□□□□ -1.8
SCARNA17.1-201ENST00000516211 ACBD3Q9H3P7 528 aa3.81□□□□□ -1.8
SCARNA17.1-201ENST00000516211 METTL14Q9HCE5 456 aaKnown RBP3.81□□□□□ -1.8
SCARNA17.1-201ENST00000516211 STRCQ7RTU9 1775 aa3.81□□□□□ -1.8
SCARNA17.1-201ENST00000516211 ADAMTSL3P82987 1691 aa3.81□□□□□ -1.8
SCARNA17.1-201ENST00000516211 CFTRP13569 1480 aa3.8□□□□□ -1.8
SCARNA17.1-201ENST00000516211 ERBB3P21860 1342 aa3.8□□□□□ -1.8
SCARNA17.1-201ENST00000516211 BRD2P25440 801 aaKnown RBP3.8□□□□□ -1.8
SCARNA17.1-201ENST00000516211 ENOX2Q16206 610 aaKnown RBP3.8□□□□□ -1.8
SCARNA17.1-201ENST00000516211 ESCO1Q5FWF5 840 aa3.8□□□□□ -1.8
SCARNA17.1-201ENST00000516211 USP48Q86UV5 1035 aa3.8□□□□□ -1.8
SCARNA17.1-201ENST00000516211 CKAP2LQ8IYA6 745 aa3.8□□□□□ -1.8
SCARNA17.1-201ENST00000516211 FAM129BQ96TA1 746 aa3.8□□□□□ -1.8
SCARNA17.1-201ENST00000516211 OSBPL2Q9H1P3 480 aa3.8□□□□□ -1.8
SCARNA17.1-201ENST00000516211 TSR3Q9UJK0 312 aaKnown RBP3.8□□□□□ -1.8
SCARNA17.1-201ENST00000516211 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.8□□□□□ -1.8
SCARNA17.1-201ENST00000516211 HPS5Q9UPZ3 1129 aa3.8□□□□□ -1.8
SCARNA17.1-201ENST00000516211 ADCY10Q96PN6 1610 aa3.8□□□□□ -1.8
SCARNA17.1-201ENST00000516211 SETBP1Q9Y6X0 1596 aa3.8□□□□□ -1.8
SCARNA17.1-201ENST00000516211 MAPKBP1O60336 1514 aa3.8□□□□□ -1.8
SCARNA17.1-201ENST00000516211 ESPNB1AK53 854 aa3.79□□□□□ -1.8
SCARNA17.1-201ENST00000516211 TK2O00142 265 aa3.79□□□□□ -1.8
SCARNA17.1-201ENST00000516211 WASLO00401 505 aaPredicted RBP3.79□□□□□ -1.8
SCARNA17.1-201ENST00000516211 MARCH6O60337 910 aa3.79□□□□□ -1.8
SCARNA17.1-201ENST00000516211 RPLP1P05386 114 aaKnown RBP3.79□□□□□ -1.8
SCARNA17.1-201ENST00000516211 EIF4BP23588 611 aaKnown RBP3.79□□□□□ -1.8
SCARNA17.1-201ENST00000516211 CEBPAP49715 358 aaPredicted RBP3.79□□□□□ -1.8
SCARNA17.1-201ENST00000516211 RAB15P59190 212 aa3.79□□□□□ -1.8
SCARNA17.1-201ENST00000516211 RBL2Q08999 1139 aa3.79□□□□□ -1.8
SCARNA17.1-201ENST00000516211 CAPN12Q6ZSI9 719 aa3.79□□□□□ -1.8
SCARNA17.1-201ENST00000516211 SH3RF1Q7Z6J0 888 aa3.79□□□□□ -1.8
SCARNA17.1-201ENST00000516211 STAG2Q8N3U4 1231 aa3.79□□□□□ -1.8
SCARNA17.1-201ENST00000516211 PURBQ96QR8 312 aaKnown RBP3.79□□□□□ -1.8
SCARNA17.1-201ENST00000516211 BUD13Q9BRD0 619 aaKnown RBP eCLIP3.79□□□□□ -1.8
SCARNA17.1-201ENST00000516211 NIF3L1Q9GZT8 377 aa3.79□□□□□ -1.8
SCARNA17.1-201ENST00000516211 TMX1Q9H3N1 280 aa3.79□□□□□ -1.8
SCARNA17.1-201ENST00000516211 FAM13BQ9NYF5 915 aa3.79□□□□□ -1.8
SCARNA17.1-201ENST00000516211 MADDQ8WXG6 1647 aa3.79□□□□□ -1.8
SCARNA17.1-201ENST00000516211 ZNF335Q9H4Z2 1342 aaPredicted RBP3.78□□□□□ -1.8
SCARNA17.1-201ENST00000516211 GIPC1O14908 333 aa3.78□□□□□ -1.8
SCARNA17.1-201ENST00000516211 GPR182O15218 404 aa3.78□□□□□ -1.8
SCARNA17.1-201ENST00000516211 FZD6O60353 706 aa3.78□□□□□ -1.8
SCARNA17.1-201ENST00000516211 HSD3B2P26439 372 aa3.78□□□□□ -1.8
SCARNA17.1-201ENST00000516211 MZF1P28698 734 aaPredicted RBP3.78□□□□□ -1.8
SCARNA17.1-201ENST00000516211 APLP1P51693 650 aa3.78□□□□□ -1.8
SCARNA17.1-201ENST00000516211 GDF10P55107 478 aa3.78□□□□□ -1.8
SCARNA17.1-201ENST00000516211 PSMA6P60900 246 aaKnown RBP3.78□□□□□ -1.8
SCARNA17.1-201ENST00000516211 PTPROQ16827 1216 aa3.78□□□□□ -1.8
SCARNA17.1-201ENST00000516211 TAF7LQ5H9L4 462 aa3.78□□□□□ -1.8
SCARNA17.1-201ENST00000516211 CCDC181Q5TID7 509 aa3.78□□□□□ -1.8
SCARNA17.1-201ENST00000516211 DMRTA1Q5VZB9 504 aa3.78□□□□□ -1.8
SCARNA17.1-201ENST00000516211 CC2D2BQ6DHV5 1058 aa3.78□□□□□ -1.8
SCARNA17.1-201ENST00000516211 PPP1R18Q6NYC8 613 aa3.78□□□□□ -1.8
SCARNA17.1-201ENST00000516211 TRMT44Q8IYL2 757 aaKnown RBP3.78□□□□□ -1.8
SCARNA17.1-201ENST00000516211 TNS4Q8IZW8 715 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms