RNA–Protein interactions for RNA: ENST00000516211.1

SCARNA17.1-201, small Cajal body-specific RNA 17, humanhuman

BASIC

Gene SCARNA17, Length 143 nt, Biotype scaRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA17.1-201ENST00000516211 CHIC1Q5VXU3 224 aa8.33□□□□□ -1.08
SCARNA17.1-201ENST00000516211 AEBP2Q6ZN18 517 aaPredicted RBP7.98□□□□□ -1.13
SCARNA17.1-201ENST00000516211 PHF23Q9BUL5 403 aaPredicted RBP7.28□□□□□ -1.24
SCARNA17.1-201ENST00000516211 PLPPR3Q6T4P5 718 aa7.03□□□□□ -1.28
SCARNA17.1-201ENST00000516211 SENP3Q9H4L4 574 aaPredicted RBP6.86□□□□□ -1.31
SCARNA17.1-201ENST00000516211 EHMT2Q96KQ7 1210 aa6.69□□□□□ -1.34
SCARNA17.1-201ENST00000516211 KCNA4P22459 653 aa6.53□□□□□ -1.36
SCARNA17.1-201ENST00000516211 ADRA2BP18089 450 aa6.42□□□□□ -1.38
SCARNA17.1-201ENST00000516211 SLC4A1APQ9BWU0 796 aaKnown RBP6.38□□□□□ -1.39
SCARNA17.1-201ENST00000516211 CSRNP3Q8WYN3 585 aa6.33□□□□□ -1.4
SCARNA17.1-201ENST00000516211 NCBP3Q53F19 620 aaKnown RBP6.29□□□□□ -1.4
SCARNA17.1-201ENST00000516211 PPP6R1Q9UPN7 881 aa6.27□□□□□ -1.41
SCARNA17.1-201ENST00000516211 SLC24A1O60721 1099 aa6.24□□□□□ -1.41
SCARNA17.1-201ENST00000516211 FOXD1Q16676 465 aa6.21□□□□□ -1.42
SCARNA17.1-201ENST00000516211 PPP4R3CPQ6ZMV5 832 aa6.21□□□□□ -1.42
SCARNA17.1-201ENST00000516211 AMER1Q5JTC6 1135 aaPredicted RBP6.12□□□□□ -1.43
SCARNA17.1-201ENST00000516211 NPM3O75607 178 aaKnown RBP6.05□□□□□ -1.44
SCARNA17.1-201ENST00000516211 PIAS4Q8N2W9 510 aaPredicted RBP6.04□□□□□ -1.44
SCARNA17.1-201ENST00000516211 RTN4Q9NQC3 1192 aaKnown RBP6□□□□□ -1.45
SCARNA17.1-201ENST00000516211 SCAF1Q9H7N4 1312 aaKnown RBP5.98□□□□□ -1.45
SCARNA17.1-201ENST00000516211 CNKSR2Q8WXI2 1034 aa5.97□□□□□ -1.45
SCARNA17.1-201ENST00000516211 FOXD4L1Q9NU39 408 aa5.96□□□□□ -1.46
SCARNA17.1-201ENST00000516211 ZBTB22O15209 634 aa5.95□□□□□ -1.46
SCARNA17.1-201ENST00000516211 DNAJC5BQ9UF47 199 aa5.83□□□□□ -1.48
SCARNA17.1-201ENST00000516211 FKBP8Q14318 412 aa5.78□□□□□ -1.48
SCARNA17.1-201ENST00000516211 ATXN8OSP0DMR3 200 aa5.73□□□□□ -1.49
SCARNA17.1-201ENST00000516211 RNF216Q9NWF9 866 aaPredicted RBP5.73□□□□□ -1.49
SCARNA17.1-201ENST00000516211 MSH5O43196 834 aa5.67□□□□□ -1.5
SCARNA17.1-201ENST00000516211 MYCNP04198 464 aaPredicted RBP5.67□□□□□ -1.5
SCARNA17.1-201ENST00000516211 DNAJC5Q9H3Z4 198 aa5.59□□□□□ -1.51
SCARNA17.1-201ENST00000516211 MAPK8IP2Q13387 824 aaPredicted RBP5.58□□□□□ -1.52
SCARNA17.1-201ENST00000516211 SLC4A2P04920 1241 aa5.56□□□□□ -1.52
SCARNA17.1-201ENST00000516211 PLCB2Q00722 1185 aa5.56□□□□□ -1.52
SCARNA17.1-201ENST00000516211 BCANQ96GW7 911 aa5.56□□□□□ -1.52
SCARNA17.1-201ENST00000516211 HOXD11P31277 338 aaPredicted RBP5.55□□□□□ -1.52
SCARNA17.1-201ENST00000516211 FBXO3Q9UK99 471 aa5.54□□□□□ -1.52
SCARNA17.1-201ENST00000516211 HAP1P54257 671 aaPredicted RBP5.53□□□□□ -1.52
SCARNA17.1-201ENST00000516211 DCAF8L2P0C7V8 631 aa5.5□□□□□ -1.53
SCARNA17.1-201ENST00000516211 DMRT2Q9Y5R5 561 aa5.5□□□□□ -1.53
SCARNA17.1-201ENST00000516211 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.49□□□□□ -1.53
SCARNA17.1-201ENST00000516211 HNRNPUL2Q1KMD3 747 aaKnown RBP5.49□□□□□ -1.53
SCARNA17.1-201ENST00000516211 SAMD1Q6SPF0 538 aaPredicted RBP5.45□□□□□ -1.54
SCARNA17.1-201ENST00000516211 VSIG10Q8N0Z9 540 aa5.45□□□□□ -1.54
SCARNA17.1-201ENST00000516211 TAOK2Q9UL54 1235 aa5.43□□□□□ -1.54
SCARNA17.1-201ENST00000516211 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.4□□□□□ -1.54
SCARNA17.1-201ENST00000516211 PRKCSHP14314 528 aaPredicted RBP5.38□□□□□ -1.55
SCARNA17.1-201ENST00000516211 APLP2Q06481 763 aa5.38□□□□□ -1.55
SCARNA17.1-201ENST00000516211 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.38□□□□□ -1.55
SCARNA17.1-201ENST00000516211 VASPP50552 380 aaPredicted RBP5.37□□□□□ -1.55
SCARNA17.1-201ENST00000516211 SPDYE4A6NLX3 237 aa5.36□□□□□ -1.55
SCARNA17.1-201ENST00000516211 TPRNQ4KMQ1 711 aa5.36□□□□□ -1.55
SCARNA17.1-201ENST00000516211 ABCC9O60706 1549 aa5.36□□□□□ -1.55
SCARNA17.1-201ENST00000516211 ATF5Q9Y2D1 282 aaPredicted RBP5.33□□□□□ -1.56
SCARNA17.1-201ENST00000516211 DCAF8L1A6NGE4 600 aa5.31□□□□□ -1.56
SCARNA17.1-201ENST00000516211 BBXQ8WY36 941 aaPredicted RBP5.31□□□□□ -1.56
SCARNA17.1-201ENST00000516211 ZNF219Q9P2Y4 722 aaPredicted RBP5.31□□□□□ -1.56
SCARNA17.1-201ENST00000516211 ERICH6Q7L0X2 663 aa5.3□□□□□ -1.56
SCARNA17.1-201ENST00000516211 FBLN2P98095 1184 aa5.28□□□□□ -1.56
SCARNA17.1-201ENST00000516211 PAXIP1Q6ZW49 1069 aaPredicted RBP5.27□□□□□ -1.57
SCARNA17.1-201ENST00000516211 CFAP44Q96MT7 982 aa5.27□□□□□ -1.57
SCARNA17.1-201ENST00000516211 IFNLR1Q8IU57 520 aaPredicted RBP5.26□□□□□ -1.57
SCARNA17.1-201ENST00000516211 PKD2Q13563 968 aa5.25□□□□□ -1.57
SCARNA17.1-201ENST00000516211 NBR1Q14596 966 aa5.25□□□□□ -1.57
SCARNA17.1-201ENST00000516211 PROM2Q8N271 834 aa5.25□□□□□ -1.57
SCARNA17.1-201ENST00000516211 ECM2O94769 699 aaPredicted RBP5.24□□□□□ -1.57
SCARNA17.1-201ENST00000516211 KLHL34Q8N239 644 aa5.24□□□□□ -1.57
SCARNA17.1-201ENST00000516211 U3KPZ7 1027 aaPredicted RBP5.24□□□□□ -1.57
SCARNA17.1-201ENST00000516211 SPRYD3Q8NCJ5 442 aa5.23□□□□□ -1.57
SCARNA17.1-201ENST00000516211 SPOCK2Q92563 424 aa5.22□□□□□ -1.57
SCARNA17.1-201ENST00000516211 KDM2AQ9Y2K7 1162 aa5.22□□□□□ -1.57
SCARNA17.1-201ENST00000516211 ARXQ96QS3 562 aa5.2□□□□□ -1.58
SCARNA17.1-201ENST00000516211 DAXXQ9UER7 740 aaPredicted RBP5.18□□□□□ -1.58
SCARNA17.1-201ENST00000516211 TRIM41Q8WV44 630 aa5.17□□□□□ -1.58
SCARNA17.1-201ENST00000516211 TULP1O00294 542 aaPredicted RBP5.16□□□□□ -1.58
SCARNA17.1-201ENST00000516211 GTF3C3Q9Y5Q9 886 aa5.15□□□□□ -1.59
SCARNA17.1-201ENST00000516211 MKRN4PQ13434 485 aaPredicted RBP5.14□□□□□ -1.59
SCARNA17.1-201ENST00000516211 STAG3Q9UJ98 1225 aa5.14□□□□□ -1.59
SCARNA17.1-201ENST00000516211 NPM1P06748 294 aaKnown RBP eCLIP5.13□□□□□ -1.59
SCARNA17.1-201ENST00000516211 PLCD3Q8N3E9 789 aa5.13□□□□□ -1.59
SCARNA17.1-201ENST00000516211 TSHZ2Q9NRE2 1034 aa5.13□□□□□ -1.59
SCARNA17.1-201ENST00000516211 TIMELESSQ9UNS1 1208 aa5.13□□□□□ -1.59
SCARNA17.1-201ENST00000516211 ZBTB12Q9Y330 459 aaPredicted RBP5.13□□□□□ -1.59
SCARNA17.1-201ENST00000516211 PLEKHG5O94827 1062 aa5.12□□□□□ -1.59
SCARNA17.1-201ENST00000516211 CHGAP10645 457 aaKnown RBP5.11□□□□□ -1.59
SCARNA17.1-201ENST00000516211 ZBTB47Q9UFB7 747 aaPredicted RBP5.1□□□□□ -1.59
SCARNA17.1-201ENST00000516211 RGL2O15211 777 aa5.09□□□□□ -1.59
SCARNA17.1-201ENST00000516211 HOMEZQ8IX15 550 aa5.09□□□□□ -1.59
SCARNA17.1-201ENST00000516211 TMEM132AQ24JP5 1023 aa5.08□□□□□ -1.6
SCARNA17.1-201ENST00000516211 CIZ1Q9ULV3 898 aaPredicted RBP5.08□□□□□ -1.6
SCARNA17.1-201ENST00000516211 TRHP20396 242 aaPredicted RBP5.07□□□□□ -1.6
SCARNA17.1-201ENST00000516211 POLA2Q14181 598 aa5.06□□□□□ -1.6
SCARNA17.1-201ENST00000516211 C14orf37Q86TY3 774 aa5.06□□□□□ -1.6
SCARNA17.1-201ENST00000516211 MIER1Q8N108 512 aa5.05□□□□□ -1.6
SCARNA17.1-201ENST00000516211 HS6ST3Q8IZP7 471 aa5.03□□□□□ -1.6
SCARNA17.1-201ENST00000516211 CAPN15O75808 1086 aa5.01□□□□□ -1.61
SCARNA17.1-201ENST00000516211 ZNF692Q9BU19 519 aaPredicted RBP5.01□□□□□ -1.61
SCARNA17.1-201ENST00000516211 ILDR1Q86SU0 546 aaPredicted RBP5□□□□□ -1.61
SCARNA17.1-201ENST00000516211 PABPN1Q86U42 306 aaKnown RBP eCLIP5□□□□□ -1.61
SCARNA17.1-201ENST00000516211 P3H3Q8IVL6 736 aa5□□□□□ -1.61
SCARNA17.1-201ENST00000516211 RYDENQ9NUL5 291 aaKnown RBP5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms