RNA–Protein interactions for RNA: ENST00000511162.1

SERF1A-206, Transcript of small EDRK-rich factor 1A, humanhuman

TSL 4

Gene SERF1A, Length 328 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1A-206ENST00000511162 TSPYL4Q9UJ04 414 aa28.57■■■□□ 2.16
SERF1A-206ENST00000511162 SENP3-EIF4A1A0A087X0R7 540 aa28.56■■■□□ 2.16
SERF1A-206ENST00000511162 STARD3NLO95772 234 aa28.56■■■□□ 2.16
SERF1A-206ENST00000511162 BABAM1Q9NWV8 329 aa28.56■■■□□ 2.16
SERF1A-206ENST00000511162 MYH14Q7Z406 1995 aaKnown RBP28.55■■■□□ 2.16
SERF1A-206ENST00000511162 SNRPA1P09661 255 aaKnown RBP28.55■■■□□ 2.16
SERF1A-206ENST00000511162 ADRA2BP18089 450 aa28.55■■■□□ 2.16
SERF1A-206ENST00000511162 EIF4A1P60842 406 aaKnown RBP28.55■■■□□ 2.16
SERF1A-206ENST00000511162 ZBTB1Q9Y2K1 713 aa28.55■■■□□ 2.16
SERF1A-206ENST00000511162 PRAMEF22A3QJZ6 481 aa28.54■■■□□ 2.16
SERF1A-206ENST00000511162 TRAPPC3LQ5T215 181 aa28.53■■■□□ 2.16
SERF1A-206ENST00000511162 SOS1Q07889 1333 aaPredicted RBP28.52■■■□□ 2.16
SERF1A-206ENST00000511162 CHL1O00533 1208 aa28.52■■■□□ 2.16
SERF1A-206ENST00000511162 USP16Q9Y5T5 823 aa28.52■■■□□ 2.16
SERF1A-206ENST00000511162 CCDC27Q2M243 656 aa28.51■■■□□ 2.15
SERF1A-206ENST00000511162 MIER1Q8N108 512 aa28.51■■■□□ 2.15
SERF1A-206ENST00000511162 ARHGEF1Q92888 912 aaKnown RBP28.51■■■□□ 2.15
SERF1A-206ENST00000511162 LAS1LQ9Y4W2 734 aaKnown RBP28.51■■■□□ 2.15
SERF1A-206ENST00000511162 CALD1Q05682 793 aaKnown RBP28.5■■■□□ 2.15
SERF1A-206ENST00000511162 MSL1Q68DK7 614 aa28.5■■■□□ 2.15
SERF1A-206ENST00000511162 CANXP27824 592 aaKnown RBP28.49■■■□□ 2.15
SERF1A-206ENST00000511162 CFAP44Q96MT7 982 aa28.49■■■□□ 2.15
SERF1A-206ENST00000511162 GIGYF1O75420 1035 aaPredicted RBP28.48■■■□□ 2.15
SERF1A-206ENST00000511162 NCBP3Q53F19 620 aaKnown RBP28.48■■■□□ 2.15
SERF1A-206ENST00000511162 COL15A1P39059 1388 aa28.48■■■□□ 2.15
SERF1A-206ENST00000511162 A1BGP04217 495 aa28.47■■■□□ 2.15
SERF1A-206ENST00000511162 RFC4P35249 363 aa28.47■■■□□ 2.15
SERF1A-206ENST00000511162 WWC1Q8IX03 1113 aa28.47■■■□□ 2.15
SERF1A-206ENST00000511162 C4AP0C0L4 1744 aa28.46■■■□□ 2.15
SERF1A-206ENST00000511162 ZNF853P0CG23 659 aa28.46■■■□□ 2.15
SERF1A-206ENST00000511162 IFT57Q9NWB7 429 aa28.46■■■□□ 2.15
SERF1A-206ENST00000511162 FHDC1Q9C0D6 1143 aaPredicted RBP28.45■■■□□ 2.14
SERF1A-206ENST00000511162 LAMB4A4D0S4 1761 aa28.45■■■□□ 2.14
SERF1A-206ENST00000511162 POLD1P28340 1107 aa28.44■■■□□ 2.14
SERF1A-206ENST00000511162 EIF5P55010 431 aaKnown RBP28.44■■■□□ 2.14
SERF1A-206ENST00000511162 MBIPQ9NS73 344 aa28.44■■■□□ 2.14
SERF1A-206ENST00000511162 USP42Q9H9J4 1324 aaKnown RBP28.43■■■□□ 2.14
SERF1A-206ENST00000511162 GNAI1P63096 354 aa28.43■■■□□ 2.14
SERF1A-206ENST00000511162 ARXQ96QS3 562 aa28.43■■■□□ 2.14
SERF1A-206ENST00000511162 SYT17Q9BSW7 474 aa28.43■■■□□ 2.14
SERF1A-206ENST00000511162 SRP68Q9UHB9 627 aaKnown RBP28.43■■■□□ 2.14
SERF1A-206ENST00000511162 SALL2Q9Y467 1007 aaPredicted RBP28.43■■■□□ 2.14
SERF1A-206ENST00000511162 IL6STP40189 918 aaPredicted RBP28.42■■■□□ 2.14
SERF1A-206ENST00000511162 PIP4K2AP48426 406 aaPredicted RBP28.42■■■□□ 2.14
SERF1A-206ENST00000511162 GYS1P13807 737 aa28.41■■■□□ 2.14
SERF1A-206ENST00000511162 KRT24Q2M2I5 525 aa28.41■■■□□ 2.14
SERF1A-206ENST00000511162 ZNF330Q9Y3S2 320 aaPredicted RBP28.41■■■□□ 2.14
SERF1A-206ENST00000511162 NGEFQ8N5V2 710 aa28.4■■■□□ 2.14
SERF1A-206ENST00000511162 NBPF26B4DH59 902 aa28.39■■■□□ 2.14
SERF1A-206ENST00000511162 NBPF10Q6P3W6 841 aaKnown RBP28.39■■■□□ 2.14
SERF1A-206ENST00000511162 NBPF15Q8N660 670 aa28.39■■■□□ 2.14
SERF1A-206ENST00000511162 A0A087WZG4 1122 aa28.38■■■□□ 2.13
SERF1A-206ENST00000511162 ZPR1O75312 459 aa28.38■■■□□ 2.13
SERF1A-206ENST00000511162 NARFQ9UHQ1 456 aa28.38■■■□□ 2.13
SERF1A-206ENST00000511162 IL16Q14005 1332 aa28.38■■■□□ 2.13
SERF1A-206ENST00000511162 USPL1Q5W0Q7 1092 aa28.37■■■□□ 2.13
SERF1A-206ENST00000511162 NLGN1Q8N2Q7 840 aa28.37■■■□□ 2.13
SERF1A-206ENST00000511162 DCAF8L1A6NGE4 600 aa28.36■■■□□ 2.13
SERF1A-206ENST00000511162 FKBP8Q14318 412 aa28.35■■■□□ 2.13
SERF1A-206ENST00000511162 NPM2Q86SE8 214 aaKnown RBP28.35■■■□□ 2.13
SERF1A-206ENST00000511162 WDR63Q8IWG1 891 aa28.35■■■□□ 2.13
SERF1A-206ENST00000511162 MMP10P09238 476 aa28.34■■■□□ 2.13
SERF1A-206ENST00000511162 ERBB4Q15303 1308 aa28.34■■■□□ 2.13
SERF1A-206ENST00000511162 HOXB7P09629 217 aa28.33■■■□□ 2.13
SERF1A-206ENST00000511162 EIF2S2P20042 333 aaKnown RBP28.33■■■□□ 2.13
SERF1A-206ENST00000511162 TSR2Q969E8 191 aaKnown RBP28.33■■■□□ 2.13
SERF1A-206ENST00000511162 BCL2L12Q9HB09 334 aa28.33■■■□□ 2.13
SERF1A-206ENST00000511162 TBC1D2BQ9UPU7 963 aa28.33■■■□□ 2.13
SERF1A-206ENST00000511162 DUSP27Q5VZP5 1158 aa28.31■■■□□ 2.12
SERF1A-206ENST00000511162 DZIP3Q86Y13 1208 aaKnown RBP28.31■■■□□ 2.12
SERF1A-206ENST00000511162 SCN7AQ01118 1682 aa28.31■■■□□ 2.12
SERF1A-206ENST00000511162 ZNF521Q96K83 1311 aa28.3■■■□□ 2.12
SERF1A-206ENST00000511162 CAMTA2O94983 1202 aa28.3■■■□□ 2.12
SERF1A-206ENST00000511162 NECTIN2Q92692 538 aa28.3■■■□□ 2.12
SERF1A-206ENST00000511162 MYL6BP14649 208 aa28.29■■■□□ 2.12
SERF1A-206ENST00000511162 UTRNP46939 3433 aa28.28■■■□□ 2.12
SERF1A-206ENST00000511162 YY1P25490 414 aa28.28■■■□□ 2.12
SERF1A-206ENST00000511162 PDIA6Q15084 440 aa28.28■■■□□ 2.12
SERF1A-206ENST00000511162 HDGFL1Q5TGJ6 251 aa28.28■■■□□ 2.12
SERF1A-206ENST00000511162 FANCIQ9NVI1 1328 aa28.27■■■□□ 2.12
SERF1A-206ENST00000511162 KLHL34Q8N239 644 aa28.27■■■□□ 2.12
SERF1A-206ENST00000511162 C8orf58Q8NAV2 365 aa28.27■■■□□ 2.12
SERF1A-206ENST00000511162 ELL2O00472 640 aaPredicted RBP28.26■■■□□ 2.11
SERF1A-206ENST00000511162 DDR1Q08345 913 aa28.26■■■□□ 2.11
SERF1A-206ENST00000511162 PROSER3Q2NL68 480 aa28.26■■■□□ 2.11
SERF1A-206ENST00000511162 SPINK5Q9NQ38 1064 aaPredicted RBP28.26■■■□□ 2.11
SERF1A-206ENST00000511162 TM4SF1P30408 202 aa28.25■■■□□ 2.11
SERF1A-206ENST00000511162 NFIXQ14938 502 aa28.25■■■□□ 2.11
SERF1A-206ENST00000511162 LRP10Q7Z4F1 713 aa28.25■■■□□ 2.11
SERF1A-206ENST00000511162 PARP3Q9Y6F1 533 aa28.25■■■□□ 2.11
SERF1A-206ENST00000511162 BCORQ6W2J9 1755 aa28.24■■■□□ 2.11
SERF1A-206ENST00000511162 ANXA1P04083 346 aa28.24■■■□□ 2.11
SERF1A-206ENST00000511162 CHPF2Q9P2E5 772 aa28.24■■■□□ 2.11
SERF1A-206ENST00000511162 CHD4Q14839 1912 aa28.24■■■□□ 2.11
SERF1A-206ENST00000511162 POLRMTO00411 1230 aaKnown RBP28.23■■■□□ 2.11
SERF1A-206ENST00000511162 TSPYL6Q8N831 410 aa28.23■■■□□ 2.11
SERF1A-206ENST00000511162 DDX21Q9NR30 783 aaKnown RBP eCLIP28.23■■■□□ 2.11
SERF1A-206ENST00000511162 TBC1D9BQ66K14 1250 aa28.22■■■□□ 2.11
SERF1A-206ENST00000511162 TTLL7Q6ZT98 887 aa28.22■■■□□ 2.11
SERF1A-206ENST00000511162 MYH16Q9H6N6 1097 aa28.21■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms