RNA–Protein interactions for RNA: ENST00000494019.5

RFC2-211, Transcript of replication factor C subunit 2, humanhuman

TSL 3

Gene RFC2, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC2-211ENST00000494019 MSH5O43196 834 aa13.18□□□□□ -0.3
RFC2-211ENST00000494019 SSFA2P28290 1259 aa13.18□□□□□ -0.3
RFC2-211ENST00000494019 GNAI1P63096 354 aa13.18□□□□□ -0.3
RFC2-211ENST00000494019 NCBP3Q53F19 620 aaKnown RBP13.18□□□□□ -0.3
RFC2-211ENST00000494019 RC3H1Q5TC82 1133 aaKnown RBP13.18□□□□□ -0.3
RFC2-211ENST00000494019 SMIM5Q71RC9 77 aa13.18□□□□□ -0.3
RFC2-211ENST00000494019 TEX13AQ9BXU3 409 aaPredicted RBP13.18□□□□□ -0.3
RFC2-211ENST00000494019 MBIPQ9NS73 344 aa13.18□□□□□ -0.3
RFC2-211ENST00000494019 IFT57Q9NWB7 429 aa13.18□□□□□ -0.3
RFC2-211ENST00000494019 ZBTB1Q9Y2K1 713 aa13.18□□□□□ -0.3
RFC2-211ENST00000494019 RTCBQ9Y3I0 505 aaKnown RBP13.18□□□□□ -0.3
RFC2-211ENST00000494019 STARD3NLO95772 234 aa13.17□□□□□ -0.3
RFC2-211ENST00000494019 INTS5Q6P9B9 1019 aaKnown RBP13.17□□□□□ -0.3
RFC2-211ENST00000494019 COL23A1Q86Y22 540 aaPredicted RBP13.17□□□□□ -0.3
RFC2-211ENST00000494019 FLAD1Q8NFF5 587 aa13.17□□□□□ -0.3
RFC2-211ENST00000494019 COL15A1P39059 1388 aa13.17□□□□□ -0.3
RFC2-211ENST00000494019 GIGYF1O75420 1035 aaPredicted RBP13.16□□□□□ -0.3
RFC2-211ENST00000494019 RPS6KA4O75676 772 aa13.16□□□□□ -0.3
RFC2-211ENST00000494019 ZBTB7AO95365 584 aa13.16□□□□□ -0.3
RFC2-211ENST00000494019 CANXP27824 592 aaKnown RBP13.16□□□□□ -0.3
RFC2-211ENST00000494019 NGEFQ8N5V2 710 aa13.16□□□□□ -0.3
RFC2-211ENST00000494019 USP16Q9Y5T5 823 aa13.16□□□□□ -0.3
RFC2-211ENST00000494019 NUP98P52948 1817 aa13.16□□□□□ -0.3
RFC2-211ENST00000494019 SOS1Q07889 1333 aaPredicted RBP13.15□□□□□ -0.3
RFC2-211ENST00000494019 CACNA1FO60840 1977 aa13.15□□□□□ -0.3
RFC2-211ENST00000494019 ZNF853P0CG23 659 aa13.15□□□□□ -0.3
RFC2-211ENST00000494019 KRT24Q2M2I5 525 aa13.15□□□□□ -0.3
RFC2-211ENST00000494019 ZNF330Q9Y3S2 320 aaPredicted RBP13.15□□□□□ -0.3
RFC2-211ENST00000494019 IL16Q14005 1332 aa13.14□□□□□ -0.31
RFC2-211ENST00000494019 A1BGP04217 495 aa13.14□□□□□ -0.31
RFC2-211ENST00000494019 ADRA2BP18089 450 aa13.14□□□□□ -0.31
RFC2-211ENST00000494019 PIP4K2AP48426 406 aaPredicted RBP13.14□□□□□ -0.31
RFC2-211ENST00000494019 TRAPPC3LQ5T215 181 aa13.14□□□□□ -0.31
RFC2-211ENST00000494019 WDR63Q8IWG1 891 aa13.14□□□□□ -0.31
RFC2-211ENST00000494019 TSR2Q969E8 191 aaKnown RBP13.14□□□□□ -0.31
RFC2-211ENST00000494019 MTFR1LQ9H019 292 aa13.14□□□□□ -0.31
RFC2-211ENST00000494019 ANKRD36CQ5JPF3 1778 aa13.14□□□□□ -0.31
RFC2-211ENST00000494019 AFDNP55196 1824 aaKnown RBP13.13□□□□□ -0.31
RFC2-211ENST00000494019 RFC4P35249 363 aa13.13□□□□□ -0.31
RFC2-211ENST00000494019 SLC16A10Q8TF71 515 aa13.13□□□□□ -0.31
RFC2-211ENST00000494019 ARHGEF1Q92888 912 aaKnown RBP13.13□□□□□ -0.31
RFC2-211ENST00000494019 SPON1Q9HCB6 807 aa13.13□□□□□ -0.31
RFC2-211ENST00000494019 ATF5Q9Y2D1 282 aaPredicted RBP13.13□□□□□ -0.31
RFC2-211ENST00000494019 ZNF521Q96K83 1311 aa13.13□□□□□ -0.31
RFC2-211ENST00000494019 FANCIQ9NVI1 1328 aa13.13□□□□□ -0.31
RFC2-211ENST00000494019 EIF2S2P20042 333 aaKnown RBP13.12□□□□□ -0.31
RFC2-211ENST00000494019 MSL1Q68DK7 614 aa13.12□□□□□ -0.31
RFC2-211ENST00000494019 NPM2Q86SE8 214 aaKnown RBP13.12□□□□□ -0.31
RFC2-211ENST00000494019 ARFGEF2Q9Y6D5 1785 aa13.12□□□□□ -0.31
RFC2-211ENST00000494019 USP42Q9H9J4 1324 aaKnown RBP13.12□□□□□ -0.31
RFC2-211ENST00000494019 IL6STP40189 918 aaPredicted RBP13.11□□□□□ -0.31
RFC2-211ENST00000494019 EIF5P55010 431 aaKnown RBP13.11□□□□□ -0.31
RFC2-211ENST00000494019 DUSP27Q5VZP5 1158 aa13.11□□□□□ -0.31
RFC2-211ENST00000494019 NECTIN2Q92692 538 aa13.11□□□□□ -0.31
RFC2-211ENST00000494019 NBPF26B4DH59 902 aa13.1□□□□□ -0.31
RFC2-211ENST00000494019 HOXB7P09629 217 aa13.1□□□□□ -0.31
RFC2-211ENST00000494019 HDGFL1Q5TGJ6 251 aa13.1□□□□□ -0.31
RFC2-211ENST00000494019 NBPF10Q6P3W6 841 aaKnown RBP13.1□□□□□ -0.31
RFC2-211ENST00000494019 NBPF15Q8N660 670 aa13.1□□□□□ -0.31
RFC2-211ENST00000494019 SRP68Q9UHB9 627 aaKnown RBP13.1□□□□□ -0.31
RFC2-211ENST00000494019 ERBB4Q15303 1308 aa13.1□□□□□ -0.31
RFC2-211ENST00000494019 KIF13BQ9NQT8 1826 aa13.09□□□□□ -0.31
RFC2-211ENST00000494019 A0A087WZG4 1122 aa13.09□□□□□ -0.31
RFC2-211ENST00000494019 ELL2O00472 640 aaPredicted RBP13.09□□□□□ -0.31
RFC2-211ENST00000494019 ZPR1O75312 459 aa13.09□□□□□ -0.31
RFC2-211ENST00000494019 MYL6BP14649 208 aa13.09□□□□□ -0.31
RFC2-211ENST00000494019 HNRNPUQ00839 825 aaKnown RBP eCLIP13.09□□□□□ -0.31
RFC2-211ENST00000494019 C8orf58Q8NAV2 365 aa13.09□□□□□ -0.31
RFC2-211ENST00000494019 ARXQ96QS3 562 aa13.09□□□□□ -0.31
RFC2-211ENST00000494019 MYH16Q9H6N6 1097 aa13.09□□□□□ -0.31
RFC2-211ENST00000494019 SPINK5Q9NQ38 1064 aaPredicted RBP13.09□□□□□ -0.31
RFC2-211ENST00000494019 NRXN2Q9P2S2 1712 aa13.08□□□□□ -0.32
RFC2-211ENST00000494019 GYS1P13807 737 aa13.08□□□□□ -0.32
RFC2-211ENST00000494019 POLD1P28340 1107 aa13.08□□□□□ -0.32
RFC2-211ENST00000494019 PTGER2P43116 358 aa13.08□□□□□ -0.32
RFC2-211ENST00000494019 GOLGA2Q08379 1002 aa13.08□□□□□ -0.32
RFC2-211ENST00000494019 USPL1Q5W0Q7 1092 aa13.08□□□□□ -0.32
RFC2-211ENST00000494019 DZIP3Q86Y13 1208 aaKnown RBP13.08□□□□□ -0.32
RFC2-211ENST00000494019 PPP1R1BQ9UD71 204 aaPredicted RBP13.08□□□□□ -0.32
RFC2-211ENST00000494019 NARFQ9UHQ1 456 aa13.08□□□□□ -0.32
RFC2-211ENST00000494019 TBC1D2BQ9UPU7 963 aa13.08□□□□□ -0.32
RFC2-211ENST00000494019 ANXA1P04083 346 aa13.07□□□□□ -0.32
RFC2-211ENST00000494019 TSPYL6Q8N831 410 aa13.07□□□□□ -0.32
RFC2-211ENST00000494019 SGIP1Q9BQI5 828 aa13.07□□□□□ -0.32
RFC2-211ENST00000494019 EXOSC9Q06265 439 aaKnown RBP13.06□□□□□ -0.32
RFC2-211ENST00000494019 PROSER3Q2NL68 480 aa13.06□□□□□ -0.32
RFC2-211ENST00000494019 TWISTNBQ3B726 338 aaPredicted RBP13.06□□□□□ -0.32
RFC2-211ENST00000494019 CHPF2Q9P2E5 772 aa13.06□□□□□ -0.32
RFC2-211ENST00000494019 KIAA1551Q9HCM1 1747 aa13.05□□□□□ -0.32
RFC2-211ENST00000494019 N4BP2Q86UW6 1770 aaPredicted RBP13.05□□□□□ -0.32
RFC2-211ENST00000494019 E9PSI1 815 aa13.05□□□□□ -0.32
RFC2-211ENST00000494019 FKBP8Q14318 412 aa13.05□□□□□ -0.32
RFC2-211ENST00000494019 PDIA6Q15084 440 aa13.05□□□□□ -0.32
RFC2-211ENST00000494019 NLGN1Q8N2Q7 840 aa13.05□□□□□ -0.32
RFC2-211ENST00000494019 DDX21Q9NR30 783 aaKnown RBP eCLIP13.05□□□□□ -0.32
RFC2-211ENST00000494019 DBF4Q9UBU7 674 aaPredicted RBP13.05□□□□□ -0.32
RFC2-211ENST00000494019 CACNA1SQ13698 1873 aa13.04□□□□□ -0.32
RFC2-211ENST00000494019 ANKRD31Q8N7Z5 1873 aa13.04□□□□□ -0.32
RFC2-211ENST00000494019 CAMTA2O94983 1202 aa13.04□□□□□ -0.32
RFC2-211ENST00000494019 MMP10P09238 476 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms