RNA–Protein interactions for RNA: ENST00000470672.1

IMP4-212, Transcript of IMP4, U3 small nucleolar ribonucleoprotein, humanhuman

TSL 2

Gene IMP4, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP4-212ENST00000470672 COL23A1Q86Y22 540 aaPredicted RBP25.38■■□□□ 1.65
IMP4-212ENST00000470672 CCDC87Q9NVE4 849 aa25.38■■□□□ 1.65
IMP4-212ENST00000470672 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.37■■□□□ 1.65
IMP4-212ENST00000470672 CFAP44Q96MT7 982 aa25.37■■□□□ 1.65
IMP4-212ENST00000470672 MTFR1LQ9H019 292 aa25.37■■□□□ 1.65
IMP4-212ENST00000470672 C4AP0C0L4 1744 aa25.37■■□□□ 1.65
IMP4-212ENST00000470672 WWC1Q8IX03 1113 aa25.36■■□□□ 1.65
IMP4-212ENST00000470672 ZNF853P0CG23 659 aa25.35■■□□□ 1.65
IMP4-212ENST00000470672 SPON1Q9HCB6 807 aa25.35■■□□□ 1.65
IMP4-212ENST00000470672 IFT57Q9NWB7 429 aa25.35■■□□□ 1.65
IMP4-212ENST00000470672 GIGYF1O75420 1035 aaPredicted RBP25.34■■□□□ 1.65
IMP4-212ENST00000470672 SOS1Q07889 1333 aaPredicted RBP25.34■■□□□ 1.65
IMP4-212ENST00000470672 GNAI1P63096 354 aa25.33■■□□□ 1.65
IMP4-212ENST00000470672 ZBTB1Q9Y2K1 713 aa25.33■■□□□ 1.65
IMP4-212ENST00000470672 PHF14O94880 888 aa25.32■■□□□ 1.64
IMP4-212ENST00000470672 ZBTB7AO95365 584 aa25.32■■□□□ 1.64
IMP4-212ENST00000470672 TRAPPC3LQ5T215 181 aa25.32■■□□□ 1.64
IMP4-212ENST00000470672 USP16Q9Y5T5 823 aa25.32■■□□□ 1.64
IMP4-212ENST00000470672 IL16Q14005 1332 aa25.32■■□□□ 1.64
IMP4-212ENST00000470672 PRAMEF22A3QJZ6 481 aa25.31■■□□□ 1.64
IMP4-212ENST00000470672 ARHGEF1Q92888 912 aaKnown RBP25.3■■□□□ 1.64
IMP4-212ENST00000470672 MSH5O43196 834 aa25.29■■□□□ 1.64
IMP4-212ENST00000470672 SMIM5Q71RC9 77 aa25.29■■□□□ 1.64
IMP4-212ENST00000470672 WDR63Q8IWG1 891 aa25.29■■□□□ 1.64
IMP4-212ENST00000470672 SGIP1Q9BQI5 828 aa25.29■■□□□ 1.64
IMP4-212ENST00000470672 MBIPQ9NS73 344 aa25.29■■□□□ 1.64
IMP4-212ENST00000470672 LAS1LQ9Y4W2 734 aaKnown RBP25.29■■□□□ 1.64
IMP4-212ENST00000470672 IL6STP40189 918 aaPredicted RBP25.28■■□□□ 1.64
IMP4-212ENST00000470672 PTGER2P43116 358 aa25.28■■□□□ 1.64
IMP4-212ENST00000470672 COL15A1P39059 1388 aa25.28■■□□□ 1.64
IMP4-212ENST00000470672 SRCAPQ6ZRS2 3230 aa25.27■■□□□ 1.64
IMP4-212ENST00000470672 A1BGP04217 495 aa25.27■■□□□ 1.64
IMP4-212ENST00000470672 EIF5P55010 431 aaKnown RBP25.27■■□□□ 1.64
IMP4-212ENST00000470672 SENP3-EIF4A1A0A087X0R7 540 aa25.26■■□□□ 1.63
IMP4-212ENST00000470672 HOXB7P09629 217 aa25.26■■□□□ 1.63
IMP4-212ENST00000470672 RFC4P35249 363 aa25.26■■□□□ 1.63
IMP4-212ENST00000470672 ATF5Q9Y2D1 282 aaPredicted RBP25.26■■□□□ 1.63
IMP4-212ENST00000470672 CANXP27824 592 aaKnown RBP25.25■■□□□ 1.63
IMP4-212ENST00000470672 ERBB4Q15303 1308 aa25.25■■□□□ 1.63
IMP4-212ENST00000470672 USP42Q9H9J4 1324 aaKnown RBP25.25■■□□□ 1.63
IMP4-212ENST00000470672 ZNF521Q96K83 1311 aa25.24■■□□□ 1.63
IMP4-212ENST00000470672 A0A087WZG4 1122 aa25.23■■□□□ 1.63
IMP4-212ENST00000470672 SALL2Q9Y467 1007 aaPredicted RBP25.23■■□□□ 1.63
IMP4-212ENST00000470672 NBPF26B4DH59 902 aa25.22■■□□□ 1.63
IMP4-212ENST00000470672 NBPF10Q6P3W6 841 aaKnown RBP25.22■■□□□ 1.63
IMP4-212ENST00000470672 NBPF15Q8N660 670 aa25.22■■□□□ 1.63
IMP4-212ENST00000470672 SCN7AQ01118 1682 aa25.22■■□□□ 1.63
IMP4-212ENST00000470672 GYS1P13807 737 aa25.21■■□□□ 1.63
IMP4-212ENST00000470672 NARFQ9UHQ1 456 aa25.21■■□□□ 1.63
IMP4-212ENST00000470672 POLD1P28340 1107 aa25.2■■□□□ 1.62
IMP4-212ENST00000470672 KRT24Q2M2I5 525 aa25.2■■□□□ 1.62
IMP4-212ENST00000470672 NLGN1Q8N2Q7 840 aa25.2■■□□□ 1.62
IMP4-212ENST00000470672 BCORQ6W2J9 1755 aa25.2■■□□□ 1.62
IMP4-212ENST00000470672 MSL1Q68DK7 614 aa25.19■■□□□ 1.62
IMP4-212ENST00000470672 ZPR1O75312 459 aa25.18■■□□□ 1.62
IMP4-212ENST00000470672 DUSP27Q5VZP5 1158 aa25.18■■□□□ 1.62
IMP4-212ENST00000470672 NPM2Q86SE8 214 aaKnown RBP25.18■■□□□ 1.62
IMP4-212ENST00000470672 SRP68Q9UHB9 627 aaKnown RBP25.18■■□□□ 1.62
IMP4-212ENST00000470672 PIP4K2AP48426 406 aaPredicted RBP25.16■■□□□ 1.62
IMP4-212ENST00000470672 TSR2Q969E8 191 aaKnown RBP25.16■■□□□ 1.62
IMP4-212ENST00000470672 FANCIQ9NVI1 1328 aa25.15■■□□□ 1.62
IMP4-212ENST00000470672 RGL2O15211 777 aa25.15■■□□□ 1.62
IMP4-212ENST00000470672 EIF2S2P20042 333 aaKnown RBP25.15■■□□□ 1.62
IMP4-212ENST00000470672 PDIA6Q15084 440 aa25.15■■□□□ 1.62
IMP4-212ENST00000470672 USPL1Q5W0Q7 1092 aa25.15■■□□□ 1.62
IMP4-212ENST00000470672 ARXQ96QS3 562 aa25.15■■□□□ 1.62
IMP4-212ENST00000470672 PPP1R1BQ9UD71 204 aaPredicted RBP25.15■■□□□ 1.62
IMP4-212ENST00000470672 LRP10Q7Z4F1 713 aa25.14■■□□□ 1.62
IMP4-212ENST00000470672 DZIP3Q86Y13 1208 aaKnown RBP25.14■■□□□ 1.62
IMP4-212ENST00000470672 BCL2L12Q9HB09 334 aa25.14■■□□□ 1.62
IMP4-212ENST00000470672 ZNF330Q9Y3S2 320 aaPredicted RBP25.14■■□□□ 1.62
IMP4-212ENST00000470672 CAMTA2O94983 1202 aa25.13■■□□□ 1.61
IMP4-212ENST00000470672 FKBP8Q14318 412 aa25.13■■□□□ 1.61
IMP4-212ENST00000470672 HDGFL1Q5TGJ6 251 aa25.13■■□□□ 1.61
IMP4-212ENST00000470672 C8orf58Q8NAV2 365 aa25.13■■□□□ 1.61
IMP4-212ENST00000470672 CHMP4AQ9BY43 222 aa25.13■■□□□ 1.61
IMP4-212ENST00000470672 MYH16Q9H6N6 1097 aa25.13■■□□□ 1.61
IMP4-212ENST00000470672 SPINK5Q9NQ38 1064 aaPredicted RBP25.13■■□□□ 1.61
IMP4-212ENST00000470672 DDX21Q9NR30 783 aaKnown RBP eCLIP25.12■■□□□ 1.61
IMP4-212ENST00000470672 TBC1D2BQ9UPU7 963 aa25.12■■□□□ 1.61
IMP4-212ENST00000470672 MMP10P09238 476 aa25.11■■□□□ 1.61
IMP4-212ENST00000470672 GOLGA2Q08379 1002 aa25.11■■□□□ 1.61
IMP4-212ENST00000470672 TM4SF1P30408 202 aa25.1■■□□□ 1.61
IMP4-212ENST00000470672 CLEC4GQ6UXB4 293 aa25.1■■□□□ 1.61
IMP4-212ENST00000470672 MYL6BP14649 208 aa25.09■■□□□ 1.61
IMP4-212ENST00000470672 TSPYL6Q8N831 410 aa25.09■■□□□ 1.61
IMP4-212ENST00000470672 DBF4Q9UBU7 674 aaPredicted RBP25.09■■□□□ 1.61
IMP4-212ENST00000470672 KIF13BQ9NQT8 1826 aa25.08■■□□□ 1.61
IMP4-212ENST00000470672 CACNA1FO60840 1977 aa25.08■■□□□ 1.61
IMP4-212ENST00000470672 E9PSI1 815 aa25.08■■□□□ 1.61
IMP4-212ENST00000470672 ELL2O00472 640 aaPredicted RBP25.08■■□□□ 1.61
IMP4-212ENST00000470672 PROSER3Q2NL68 480 aa25.08■■□□□ 1.61
IMP4-212ENST00000470672 CHPF2Q9P2E5 772 aa25.08■■□□□ 1.61
IMP4-212ENST00000470672 NRXN2Q9P2S2 1712 aa25.08■■□□□ 1.61
IMP4-212ENST00000470672 NUP98P52948 1817 aa25.07■■□□□ 1.6
IMP4-212ENST00000470672 ERVV-1B6SEH8 477 aa25.07■■□□□ 1.6
IMP4-212ENST00000470672 TWISTNBQ3B726 338 aaPredicted RBP25.07■■□□□ 1.6
IMP4-212ENST00000470672 NECTIN2Q92692 538 aa25.07■■□□□ 1.6
IMP4-212ENST00000470672 ZNF652Q9Y2D9 606 aa25.07■■□□□ 1.6
IMP4-212ENST00000470672 MAP3K15Q6ZN16 1313 aa25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms