RNA–Protein interactions for RNA: ENST00000470558.5

ARF1-203, Transcript of ADP ribosylation factor 1, humanhuman

TSL 2

Gene ARF1, Length 820 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF1-203ENST00000470558 CCDC87Q9NVE4 849 aa20.51■□□□□ 0.87
ARF1-203ENST00000470558 BABAM1Q9NWV8 329 aa20.51■□□□□ 0.87
ARF1-203ENST00000470558 ADRA2BP18089 450 aa20.5■□□□□ 0.87
ARF1-203ENST00000470558 PTGER2P43116 358 aa20.5■□□□□ 0.87
ARF1-203ENST00000470558 SNRPA1P09661 255 aaKnown RBP20.49■□□□□ 0.87
ARF1-203ENST00000470558 ARHGEF1Q92888 912 aaKnown RBP20.49■□□□□ 0.87
ARF1-203ENST00000470558 TSPYL4Q9UJ04 414 aa20.49■□□□□ 0.87
ARF1-203ENST00000470558 EIF4A1P60842 406 aaKnown RBP20.48■□□□□ 0.87
ARF1-203ENST00000470558 SGIP1Q9BQI5 828 aa20.48■□□□□ 0.87
ARF1-203ENST00000470558 CCER2I3L3R5 266 aa20.47■□□□□ 0.87
ARF1-203ENST00000470558 ZBTB1Q9Y2K1 713 aa20.47■□□□□ 0.87
ARF1-203ENST00000470558 USP16Q9Y5T5 823 aa20.47■□□□□ 0.87
ARF1-203ENST00000470558 PRAMEF22A3QJZ6 481 aa20.46■□□□□ 0.87
ARF1-203ENST00000470558 RFC4P35249 363 aa20.46■□□□□ 0.87
ARF1-203ENST00000470558 PPP1R1BQ9UD71 204 aaPredicted RBP20.46■□□□□ 0.87
ARF1-203ENST00000470558 CHL1O00533 1208 aa20.45■□□□□ 0.86
ARF1-203ENST00000470558 CANXP27824 592 aaKnown RBP20.45■□□□□ 0.86
ARF1-203ENST00000470558 POLD1P28340 1107 aa20.45■□□□□ 0.86
ARF1-203ENST00000470558 NCBP3Q53F19 620 aaKnown RBP20.45■□□□□ 0.86
ARF1-203ENST00000470558 LAS1LQ9Y4W2 734 aaKnown RBP20.45■□□□□ 0.86
ARF1-203ENST00000470558 SOS1Q07889 1333 aaPredicted RBP20.45■□□□□ 0.86
ARF1-203ENST00000470558 GIGYF1O75420 1035 aaPredicted RBP20.44■□□□□ 0.86
ARF1-203ENST00000470558 CALD1Q05682 793 aaKnown RBP20.44■□□□□ 0.86
ARF1-203ENST00000470558 CCDC27Q2M243 656 aa20.44■□□□□ 0.86
ARF1-203ENST00000470558 MSL1Q68DK7 614 aa20.44■□□□□ 0.86
ARF1-203ENST00000470558 SENP3-EIF4A1A0A087X0R7 540 aa20.43■□□□□ 0.86
ARF1-203ENST00000470558 A1BGP04217 495 aa20.43■□□□□ 0.86
ARF1-203ENST00000470558 CFAP44Q96MT7 982 aa20.43■□□□□ 0.86
ARF1-203ENST00000470558 EIF5P55010 431 aaKnown RBP20.42■□□□□ 0.86
ARF1-203ENST00000470558 ARXQ96QS3 562 aa20.42■□□□□ 0.86
ARF1-203ENST00000470558 COL15A1P39059 1388 aa20.42■□□□□ 0.86
ARF1-203ENST00000470558 ZNF853P0CG23 659 aa20.41■□□□□ 0.86
ARF1-203ENST00000470558 IL6STP40189 918 aaPredicted RBP20.41■□□□□ 0.86
ARF1-203ENST00000470558 GYS1P13807 737 aa20.4■□□□□ 0.86
ARF1-203ENST00000470558 GNAI1P63096 354 aa20.4■□□□□ 0.86
ARF1-203ENST00000470558 WWC1Q8IX03 1113 aa20.4■□□□□ 0.86
ARF1-203ENST00000470558 NLGN1Q8N2Q7 840 aa20.4■□□□□ 0.86
ARF1-203ENST00000470558 IFT57Q9NWB7 429 aa20.4■□□□□ 0.86
ARF1-203ENST00000470558 USP42Q9H9J4 1324 aaKnown RBP20.39■□□□□ 0.85
ARF1-203ENST00000470558 A0A087WZG4 1122 aa20.39■□□□□ 0.85
ARF1-203ENST00000470558 ZPR1O75312 459 aa20.39■□□□□ 0.85
ARF1-203ENST00000470558 MIER1Q8N108 512 aa20.39■□□□□ 0.85
ARF1-203ENST00000470558 SRP68Q9UHB9 627 aaKnown RBP20.39■□□□□ 0.85
ARF1-203ENST00000470558 NARFQ9UHQ1 456 aa20.39■□□□□ 0.85
ARF1-203ENST00000470558 NPM2Q86SE8 214 aaKnown RBP20.38■□□□□ 0.85
ARF1-203ENST00000470558 MBIPQ9NS73 344 aa20.38■□□□□ 0.85
ARF1-203ENST00000470558 ZNF330Q9Y3S2 320 aaPredicted RBP20.38■□□□□ 0.85
ARF1-203ENST00000470558 SALL2Q9Y467 1007 aaPredicted RBP20.38■□□□□ 0.85
ARF1-203ENST00000470558 BCORQ6W2J9 1755 aa20.37■□□□□ 0.85
ARF1-203ENST00000470558 PIP4K2AP48426 406 aaPredicted RBP20.37■□□□□ 0.85
ARF1-203ENST00000470558 NGEFQ8N5V2 710 aa20.37■□□□□ 0.85
ARF1-203ENST00000470558 NUP98P52948 1817 aa20.37■□□□□ 0.85
ARF1-203ENST00000470558 AFDNP55196 1824 aaKnown RBP20.37■□□□□ 0.85
ARF1-203ENST00000470558 NBPF26B4DH59 902 aa20.36■□□□□ 0.85
ARF1-203ENST00000470558 USPL1Q5W0Q7 1092 aa20.36■□□□□ 0.85
ARF1-203ENST00000470558 NBPF10Q6P3W6 841 aaKnown RBP20.36■□□□□ 0.85
ARF1-203ENST00000470558 NBPF15Q8N660 670 aa20.36■□□□□ 0.85
ARF1-203ENST00000470558 SCN7AQ01118 1682 aa20.35■□□□□ 0.85
ARF1-203ENST00000470558 IL16Q14005 1332 aa20.34■□□□□ 0.85
ARF1-203ENST00000470558 MMP10P09238 476 aa20.34■□□□□ 0.85
ARF1-203ENST00000470558 FKBP8Q14318 412 aa20.34■□□□□ 0.85
ARF1-203ENST00000470558 KRT24Q2M2I5 525 aa20.34■□□□□ 0.85
ARF1-203ENST00000470558 WDR63Q8IWG1 891 aa20.34■□□□□ 0.85
ARF1-203ENST00000470558 FHDC1Q9C0D6 1143 aaPredicted RBP20.34■□□□□ 0.85
ARF1-203ENST00000470558 TBC1D2BQ9UPU7 963 aa20.34■□□□□ 0.85
ARF1-203ENST00000470558 KIF13BQ9NQT8 1826 aa20.34■□□□□ 0.85
ARF1-203ENST00000470558 EIF2S2P20042 333 aaKnown RBP20.33■□□□□ 0.85
ARF1-203ENST00000470558 SYT17Q9BSW7 474 aa20.33■□□□□ 0.85
ARF1-203ENST00000470558 ERBB4Q15303 1308 aa20.32■□□□□ 0.84
ARF1-203ENST00000470558 CACNA1FO60840 1977 aa20.32■□□□□ 0.84
ARF1-203ENST00000470558 HOXB7P09629 217 aa20.32■□□□□ 0.84
ARF1-203ENST00000470558 DZIP3Q86Y13 1208 aaKnown RBP20.32■□□□□ 0.84
ARF1-203ENST00000470558 BCL2L12Q9HB09 334 aa20.32■□□□□ 0.84
ARF1-203ENST00000470558 PARP3Q9Y6F1 533 aa20.31■□□□□ 0.84
ARF1-203ENST00000470558 CAMTA2O94983 1202 aa20.3■□□□□ 0.84
ARF1-203ENST00000470558 MYL6BP14649 208 aa20.3■□□□□ 0.84
ARF1-203ENST00000470558 TM4SF1P30408 202 aa20.3■□□□□ 0.84
ARF1-203ENST00000470558 DUSP27Q5VZP5 1158 aa20.3■□□□□ 0.84
ARF1-203ENST00000470558 KLHL34Q8N239 644 aa20.3■□□□□ 0.84
ARF1-203ENST00000470558 NECTIN2Q92692 538 aa20.29■□□□□ 0.84
ARF1-203ENST00000470558 TSR2Q969E8 191 aaKnown RBP20.29■□□□□ 0.84
ARF1-203ENST00000470558 NRXN2Q9P2S2 1712 aa20.28■□□□□ 0.84
ARF1-203ENST00000470558 PDIA6Q15084 440 aa20.28■□□□□ 0.84
ARF1-203ENST00000470558 CD2APQ9Y5K6 639 aa20.28■□□□□ 0.84
ARF1-203ENST00000470558 NFIXQ14938 502 aa20.27■□□□□ 0.84
ARF1-203ENST00000470558 HDGFL1Q5TGJ6 251 aa20.27■□□□□ 0.84
ARF1-203ENST00000470558 C8orf58Q8NAV2 365 aa20.27■□□□□ 0.84
ARF1-203ENST00000470558 N4BP2Q86UW6 1770 aaPredicted RBP20.26■□□□□ 0.83
ARF1-203ENST00000470558 POLRMTO00411 1230 aaKnown RBP20.26■□□□□ 0.83
ARF1-203ENST00000470558 ELL2O00472 640 aaPredicted RBP20.26■□□□□ 0.83
ARF1-203ENST00000470558 DDR1Q08345 913 aa20.26■□□□□ 0.83
ARF1-203ENST00000470558 CLEC4GQ6UXB4 293 aa20.26■□□□□ 0.83
ARF1-203ENST00000470558 ANXA1P04083 346 aa20.25■□□□□ 0.83
ARF1-203ENST00000470558 PROSER3Q2NL68 480 aa20.25■□□□□ 0.83
ARF1-203ENST00000470558 TBC1D9BQ66K14 1250 aa20.25■□□□□ 0.83
ARF1-203ENST00000470558 LRP10Q7Z4F1 713 aa20.25■□□□□ 0.83
ARF1-203ENST00000470558 DDX21Q9NR30 783 aaKnown RBP eCLIP20.25■□□□□ 0.83
ARF1-203ENST00000470558 ZNF652Q9Y2D9 606 aa20.25■□□□□ 0.83
ARF1-203ENST00000470558 ZNF521Q96K83 1311 aa20.25■□□□□ 0.83
ARF1-203ENST00000470558 RGL2O15211 777 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 147.4 ms