RNA–Protein interactions for RNA: ENST00000441587.2

ALMS1-IT1-201, ALMS1 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene ALMS1-IT1, Length 2,107 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-IT1-201ENST00000441587 JUNDP17535 347 aa7.55□□□□□ -1.2
ALMS1-IT1-201ENST00000441587 MPSTP25325 297 aa7.55□□□□□ -1.2
ALMS1-IT1-201ENST00000441587 USP4Q13107 963 aa7.55□□□□□ -1.2
ALMS1-IT1-201ENST00000441587 PDE3BQ13370 1112 aa7.55□□□□□ -1.2
ALMS1-IT1-201ENST00000441587 PTPROQ16827 1216 aa7.55□□□□□ -1.2
ALMS1-IT1-201ENST00000441587 FAM98CQ17RN3 349 aaKnown RBP7.55□□□□□ -1.2
ALMS1-IT1-201ENST00000441587 GPATCH3Q96I76 525 aa7.55□□□□□ -1.2
ALMS1-IT1-201ENST00000441587 ZBED2Q9BTP6 218 aa7.55□□□□□ -1.2
ALMS1-IT1-201ENST00000441587 RNF19AQ9NV58 838 aa7.55□□□□□ -1.2
ALMS1-IT1-201ENST00000441587 METTL14Q9HCE5 456 aaKnown RBP7.55□□□□□ -1.2
ALMS1-IT1-201ENST00000441587 M0R2N6 131 aa7.54□□□□□ -1.2
ALMS1-IT1-201ENST00000441587 CLGNO14967 610 aa7.54□□□□□ -1.2
ALMS1-IT1-201ENST00000441587 ACTN4O43707 911 aaKnown RBP7.54□□□□□ -1.2
ALMS1-IT1-201ENST00000441587 MAP4K4O95819 1239 aaPredicted RBP7.54□□□□□ -1.2
ALMS1-IT1-201ENST00000441587 HOXB3P14651 431 aaPredicted RBP7.54□□□□□ -1.2
ALMS1-IT1-201ENST00000441587 RNF20Q5VTR2 975 aa7.54□□□□□ -1.2
ALMS1-IT1-201ENST00000441587 PPP1R18Q6NYC8 613 aa7.54□□□□□ -1.2
ALMS1-IT1-201ENST00000441587 NLGN1Q8N2Q7 840 aa7.54□□□□□ -1.2
ALMS1-IT1-201ENST00000441587 FOXD4Q12950 439 aaPredicted RBP7.54□□□□□ -1.2
ALMS1-IT1-201ENST00000441587 CCDC181Q5TID7 509 aa7.54□□□□□ -1.2
ALMS1-IT1-201ENST00000441587 RINLQ6ZS11 566 aa7.54□□□□□ -1.2
ALMS1-IT1-201ENST00000441587 OSBPL2Q9H1P3 480 aa7.54□□□□□ -1.2
ALMS1-IT1-201ENST00000441587 EVA1BQ9NVM1 165 aa7.54□□□□□ -1.2
ALMS1-IT1-201ENST00000441587 WWC3Q9ULE0 1092 aa7.54□□□□□ -1.2
ALMS1-IT1-201ENST00000441587 CEP164Q9UPV0 1460 aa7.54□□□□□ -1.2
ALMS1-IT1-201ENST00000441587 CCNYL3P0C7X3 344 aa7.53□□□□□ -1.2
ALMS1-IT1-201ENST00000441587 BRICD5Q6PL45 260 aa7.53□□□□□ -1.2
ALMS1-IT1-201ENST00000441587 KRBA2Q6ZNG9 492 aa7.53□□□□□ -1.2
ALMS1-IT1-201ENST00000441587 VPS37DQ86XT2 251 aa7.53□□□□□ -1.2
ALMS1-IT1-201ENST00000441587 KCNB2Q92953 911 aa7.53□□□□□ -1.2
ALMS1-IT1-201ENST00000441587 ZNF622Q969S3 477 aaKnown RBP eCLIP7.53□□□□□ -1.2
ALMS1-IT1-201ENST00000441587 MTA3Q9BTC8 594 aa7.53□□□□□ -1.2
ALMS1-IT1-201ENST00000441587 FOXO3O43524 673 aa7.52□□□□□ -1.2
ALMS1-IT1-201ENST00000441587 GIGYF1O75420 1035 aaPredicted RBP7.52□□□□□ -1.2
ALMS1-IT1-201ENST00000441587 GAS2L2Q8NHY3 880 aa7.52□□□□□ -1.2
ALMS1-IT1-201ENST00000441587 CYLDQ9NQC7 956 aa7.52□□□□□ -1.2
ALMS1-IT1-201ENST00000441587 MAGEC2Q9UBF1 373 aaPredicted RBP7.52□□□□□ -1.2
ALMS1-IT1-201ENST00000441587 TOP2BQ02880 1626 aa7.52□□□□□ -1.21
ALMS1-IT1-201ENST00000441587 KIF21BO75037 1637 aa7.52□□□□□ -1.21
ALMS1-IT1-201ENST00000441587 SH3BP5O60239 455 aa7.52□□□□□ -1.21
ALMS1-IT1-201ENST00000441587 EVX2Q03828 476 aa7.52□□□□□ -1.21
ALMS1-IT1-201ENST00000441587 TCEAL1Q15170 157 aa7.52□□□□□ -1.21
ALMS1-IT1-201ENST00000441587 TSHZ1Q6ZSZ6 1077 aa7.52□□□□□ -1.21
ALMS1-IT1-201ENST00000441587 SMC5Q8IY18 1101 aa7.52□□□□□ -1.21
ALMS1-IT1-201ENST00000441587 VTI1AQ96AJ9 217 aa7.52□□□□□ -1.21
ALMS1-IT1-201ENST00000441587 EMILIN1Q9Y6C2 1016 aa7.52□□□□□ -1.21
ALMS1-IT1-201ENST00000441587 CCER2I3L3R5 266 aa7.51□□□□□ -1.21
ALMS1-IT1-201ENST00000441587 CREB3O43889 395 aa7.51□□□□□ -1.21
ALMS1-IT1-201ENST00000441587 PPFIA4O75335 1185 aa7.51□□□□□ -1.21
ALMS1-IT1-201ENST00000441587 STK10O94804 968 aaKnown RBP7.51□□□□□ -1.21
ALMS1-IT1-201ENST00000441587 IGFBP4P22692 258 aa7.51□□□□□ -1.21
ALMS1-IT1-201ENST00000441587 MYBPC2Q14324 1141 aa7.51□□□□□ -1.21
ALMS1-IT1-201ENST00000441587 ZFYVE27Q5T4F4 411 aa7.51□□□□□ -1.21
ALMS1-IT1-201ENST00000441587 ALKBH2Q6NS38 261 aa7.51□□□□□ -1.21
ALMS1-IT1-201ENST00000441587 ZNF746Q6NUN9 644 aaPredicted RBP7.51□□□□□ -1.21
ALMS1-IT1-201ENST00000441587 EVI5LQ96CN4 794 aa7.51□□□□□ -1.21
ALMS1-IT1-201ENST00000441587 CCDC87Q9NVE4 849 aa7.51□□□□□ -1.21
ALMS1-IT1-201ENST00000441587 ANP32CO43423 234 aa7.51□□□□□ -1.21
ALMS1-IT1-201ENST00000441587 EIF1AXP47813 144 aaKnown RBP7.51□□□□□ -1.21
ALMS1-IT1-201ENST00000441587 BMS1Q14692 1282 aaKnown RBP7.51□□□□□ -1.21
ALMS1-IT1-201ENST00000441587 WDR78Q5VTH9 848 aa7.51□□□□□ -1.21
ALMS1-IT1-201ENST00000441587 ZNF654Q8IZM8 581 aa7.51□□□□□ -1.21
ALMS1-IT1-201ENST00000441587 KLHL42Q9P2K6 505 aa7.51□□□□□ -1.21
ALMS1-IT1-201ENST00000441587 ALG1LQ6GMV1 187 aa7.5□□□□□ -1.21
ALMS1-IT1-201ENST00000441587 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.5□□□□□ -1.21
ALMS1-IT1-201ENST00000441587 ZCRB1Q8TBF4 217 aaKnown RBP7.5□□□□□ -1.21
ALMS1-IT1-201ENST00000441587 NUDT12Q9BQG2 462 aa7.5□□□□□ -1.21
ALMS1-IT1-201ENST00000441587 BIVM-ERCC5R4GMW8 1640 aa7.5□□□□□ -1.21
ALMS1-IT1-201ENST00000441587 GPR182O15218 404 aa7.49□□□□□ -1.21
ALMS1-IT1-201ENST00000441587 RNF187Q5TA31 235 aaPredicted RBP7.49□□□□□ -1.21
ALMS1-IT1-201ENST00000441587 ALKBH8Q96BT7 664 aaKnown RBP7.49□□□□□ -1.21
ALMS1-IT1-201ENST00000441587 PRR14Q9BWN1 585 aa7.49□□□□□ -1.21
ALMS1-IT1-201ENST00000441587 CARD14Q9BXL6 1004 aa7.49□□□□□ -1.21
ALMS1-IT1-201ENST00000441587 DDX41Q9UJV9 622 aaKnown RBP7.49□□□□□ -1.21
ALMS1-IT1-201ENST00000441587 NOP58Q9Y2X3 529 aaKnown RBP7.49□□□□□ -1.21
ALMS1-IT1-201ENST00000441587 FZD6O60353 706 aa7.49□□□□□ -1.21
ALMS1-IT1-201ENST00000441587 HSD3B2P26439 372 aa7.49□□□□□ -1.21
ALMS1-IT1-201ENST00000441587 CALRP27797 417 aaKnown RBP7.49□□□□□ -1.21
ALMS1-IT1-201ENST00000441587 ZNF394Q53GI3 561 aa7.49□□□□□ -1.21
ALMS1-IT1-201ENST00000441587 C16orf46Q6P387 395 aa7.49□□□□□ -1.21
ALMS1-IT1-201ENST00000441587 SETDB2Q96T68 719 aa7.49□□□□□ -1.21
ALMS1-IT1-201ENST00000441587 FAM129BQ96TA1 746 aa7.49□□□□□ -1.21
ALMS1-IT1-201ENST00000441587 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.49□□□□□ -1.21
ALMS1-IT1-201ENST00000441587 PNMA2Q9UL42 364 aa7.49□□□□□ -1.21
ALMS1-IT1-201ENST00000441587 MAGEB6P1A0A0J9YX57 407 aa7.48□□□□□ -1.21
ALMS1-IT1-201ENST00000441587 IGHA2P01877 340 aa7.48□□□□□ -1.21
ALMS1-IT1-201ENST00000441587 GNA15P30679 374 aa7.48□□□□□ -1.21
ALMS1-IT1-201ENST00000441587 NFE2L2Q16236 605 aa7.48□□□□□ -1.21
ALMS1-IT1-201ENST00000441587 NBPF20Q3BBV1 942 aa7.48□□□□□ -1.21
ALMS1-IT1-201ENST00000441587 JAZF1Q86VZ6 243 aa7.48□□□□□ -1.21
ALMS1-IT1-201ENST00000441587 SCUBE3Q8IX30 993 aa7.48□□□□□ -1.21
ALMS1-IT1-201ENST00000441587 SCG3Q8WXD2 468 aaKnown RBP7.48□□□□□ -1.21
ALMS1-IT1-201ENST00000441587 CRELD1Q96HD1 420 aa7.48□□□□□ -1.21
ALMS1-IT1-201ENST00000441587 DMGDHQ9UI17 866 aaKnown RBP7.48□□□□□ -1.21
ALMS1-IT1-201ENST00000441587 PCDHB11Q9Y5F2 797 aa7.48□□□□□ -1.21
ALMS1-IT1-201ENST00000441587 PCDHGB7Q9Y5F8 929 aa7.48□□□□□ -1.21
ALMS1-IT1-201ENST00000441587 PNMA6FA0A0J9YX94 578 aa7.48□□□□□ -1.21
ALMS1-IT1-201ENST00000441587 SH3BP5LQ7L8J4 393 aa7.48□□□□□ -1.21
ALMS1-IT1-201ENST00000441587 USP48Q86UV5 1035 aa7.48□□□□□ -1.21
ALMS1-IT1-201ENST00000441587 NIF3L1Q9GZT8 377 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms