RNA–Protein interactions for RNA: ENST00000420166.5

HMGXB4-203, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 1,257 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-203ENST00000420166 IFT57Q9NWB7 429 aa26.93■■□□□ 1.9
HMGXB4-203ENST00000420166 SALL2Q9Y467 1007 aaPredicted RBP26.93■■□□□ 1.9
HMGXB4-203ENST00000420166 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.92■■□□□ 1.9
HMGXB4-203ENST00000420166 PRAMEF22A3QJZ6 481 aa26.92■■□□□ 1.9
HMGXB4-203ENST00000420166 RPS6KA4O75676 772 aa26.92■■□□□ 1.9
HMGXB4-203ENST00000420166 PHF14O94880 888 aa26.92■■□□□ 1.9
HMGXB4-203ENST00000420166 SMIM5Q71RC9 77 aa26.92■■□□□ 1.9
HMGXB4-203ENST00000420166 COL23A1Q86Y22 540 aaPredicted RBP26.92■■□□□ 1.9
HMGXB4-203ENST00000420166 RTCBQ9Y3I0 505 aaKnown RBP26.92■■□□□ 1.9
HMGXB4-203ENST00000420166 GNAI1P63096 354 aa26.91■■□□□ 1.9
HMGXB4-203ENST00000420166 GIGYF1O75420 1035 aaPredicted RBP26.9■■□□□ 1.9
HMGXB4-203ENST00000420166 MBIPQ9NS73 344 aa26.9■■□□□ 1.9
HMGXB4-203ENST00000420166 USP16Q9Y5T5 823 aa26.9■■□□□ 1.9
HMGXB4-203ENST00000420166 ZBTB1Q9Y2K1 713 aa26.89■■□□□ 1.9
HMGXB4-203ENST00000420166 C4AP0C0L4 1744 aa26.89■■□□□ 1.9
HMGXB4-203ENST00000420166 IL16Q14005 1332 aa26.89■■□□□ 1.89
HMGXB4-203ENST00000420166 MSH5O43196 834 aa26.88■■□□□ 1.89
HMGXB4-203ENST00000420166 ADRA2BP18089 450 aa26.88■■□□□ 1.89
HMGXB4-203ENST00000420166 SLC16A10Q8TF71 515 aa26.88■■□□□ 1.89
HMGXB4-203ENST00000420166 LRP5O75197 1615 aa26.87■■□□□ 1.89
HMGXB4-203ENST00000420166 ZBTB7AO95365 584 aa26.87■■□□□ 1.89
HMGXB4-203ENST00000420166 SOS1Q07889 1333 aaPredicted RBP26.87■■□□□ 1.89
HMGXB4-203ENST00000420166 TRAPPC3LQ5T215 181 aa26.86■■□□□ 1.89
HMGXB4-203ENST00000420166 WDR63Q8IWG1 891 aa26.86■■□□□ 1.89
HMGXB4-203ENST00000420166 A1BGP04217 495 aa26.85■■□□□ 1.89
HMGXB4-203ENST00000420166 MTFR1LQ9H019 292 aa26.85■■□□□ 1.89
HMGXB4-203ENST00000420166 COL24A1Q17RW2 1714 aa26.85■■□□□ 1.89
HMGXB4-203ENST00000420166 CANXP27824 592 aaKnown RBP26.84■■□□□ 1.89
HMGXB4-203ENST00000420166 ARHGEF1Q92888 912 aaKnown RBP26.84■■□□□ 1.89
HMGXB4-203ENST00000420166 ZNF521Q96K83 1311 aa26.84■■□□□ 1.89
HMGXB4-203ENST00000420166 KRT24Q2M2I5 525 aa26.83■■□□□ 1.89
HMGXB4-203ENST00000420166 SPON1Q9HCB6 807 aa26.83■■□□□ 1.89
HMGXB4-203ENST00000420166 COL15A1P39059 1388 aa26.83■■□□□ 1.88
HMGXB4-203ENST00000420166 ATF5Q9Y2D1 282 aaPredicted RBP26.82■■□□□ 1.88
HMGXB4-203ENST00000420166 EIF5P55010 431 aaKnown RBP26.81■■□□□ 1.88
HMGXB4-203ENST00000420166 TSR2Q969E8 191 aaKnown RBP26.81■■□□□ 1.88
HMGXB4-203ENST00000420166 RFC4P35249 363 aa26.8■■□□□ 1.88
HMGXB4-203ENST00000420166 IL6STP40189 918 aaPredicted RBP26.8■■□□□ 1.88
HMGXB4-203ENST00000420166 PIP4K2AP48426 406 aaPredicted RBP26.79■■□□□ 1.88
HMGXB4-203ENST00000420166 NBPF26B4DH59 902 aa26.78■■□□□ 1.88
HMGXB4-203ENST00000420166 HOXB7P09629 217 aa26.78■■□□□ 1.88
HMGXB4-203ENST00000420166 NBPF10Q6P3W6 841 aaKnown RBP26.78■■□□□ 1.88
HMGXB4-203ENST00000420166 NBPF15Q8N660 670 aa26.78■■□□□ 1.88
HMGXB4-203ENST00000420166 USP42Q9H9J4 1324 aaKnown RBP26.77■■□□□ 1.88
HMGXB4-203ENST00000420166 DUSP27Q5VZP5 1158 aa26.77■■□□□ 1.88
HMGXB4-203ENST00000420166 MSL1Q68DK7 614 aa26.77■■□□□ 1.88
HMGXB4-203ENST00000420166 ZNF330Q9Y3S2 320 aaPredicted RBP26.77■■□□□ 1.88
HMGXB4-203ENST00000420166 ERBB4Q15303 1308 aa26.76■■□□□ 1.87
HMGXB4-203ENST00000420166 FANCIQ9NVI1 1328 aa26.76■■□□□ 1.87
HMGXB4-203ENST00000420166 EIF2S2P20042 333 aaKnown RBP26.76■■□□□ 1.87
HMGXB4-203ENST00000420166 PTGER2P43116 358 aa26.76■■□□□ 1.87
HMGXB4-203ENST00000420166 SGIP1Q9BQI5 828 aa26.76■■□□□ 1.87
HMGXB4-203ENST00000420166 SPINK5Q9NQ38 1064 aaPredicted RBP26.76■■□□□ 1.87
HMGXB4-203ENST00000420166 SRP68Q9UHB9 627 aaKnown RBP26.76■■□□□ 1.87
HMGXB4-203ENST00000420166 A0A087WZG4 1122 aa26.75■■□□□ 1.87
HMGXB4-203ENST00000420166 SCN7AQ01118 1682 aa26.74■■□□□ 1.87
HMGXB4-203ENST00000420166 NPM2Q86SE8 214 aaKnown RBP26.74■■□□□ 1.87
HMGXB4-203ENST00000420166 C8orf58Q8NAV2 365 aa26.74■■□□□ 1.87
HMGXB4-203ENST00000420166 ZPR1O75312 459 aa26.73■■□□□ 1.87
HMGXB4-203ENST00000420166 GYS1P13807 737 aa26.73■■□□□ 1.87
HMGXB4-203ENST00000420166 MYH16Q9H6N6 1097 aa26.73■■□□□ 1.87
HMGXB4-203ENST00000420166 NARFQ9UHQ1 456 aa26.73■■□□□ 1.87
HMGXB4-203ENST00000420166 BCORQ6W2J9 1755 aa26.72■■□□□ 1.87
HMGXB4-203ENST00000420166 GOLGA2Q08379 1002 aa26.72■■□□□ 1.87
HMGXB4-203ENST00000420166 HDGFL1Q5TGJ6 251 aa26.72■■□□□ 1.87
HMGXB4-203ENST00000420166 NECTIN2Q92692 538 aa26.72■■□□□ 1.87
HMGXB4-203ENST00000420166 ELL2O00472 640 aaPredicted RBP26.71■■□□□ 1.87
HMGXB4-203ENST00000420166 POLD1P28340 1107 aa26.71■■□□□ 1.87
HMGXB4-203ENST00000420166 USPL1Q5W0Q7 1092 aa26.71■■□□□ 1.87
HMGXB4-203ENST00000420166 TSPYL6Q8N831 410 aa26.71■■□□□ 1.87
HMGXB4-203ENST00000420166 NLGN1Q8N2Q7 840 aa26.7■■□□□ 1.86
HMGXB4-203ENST00000420166 TBC1D2BQ9UPU7 963 aa26.7■■□□□ 1.86
HMGXB4-203ENST00000420166 MYL6BP14649 208 aa26.69■■□□□ 1.86
HMGXB4-203ENST00000420166 PDIA6Q15084 440 aa26.69■■□□□ 1.86
HMGXB4-203ENST00000420166 DZIP3Q86Y13 1208 aaKnown RBP26.69■■□□□ 1.86
HMGXB4-203ENST00000420166 HNRNPUQ00839 825 aaKnown RBP eCLIP26.68■■□□□ 1.86
HMGXB4-203ENST00000420166 PROSER3Q2NL68 480 aa26.68■■□□□ 1.86
HMGXB4-203ENST00000420166 SRCAPQ6ZRS2 3230 aa26.68■■□□□ 1.86
HMGXB4-203ENST00000420166 E9PSI1 815 aa26.67■■□□□ 1.86
HMGXB4-203ENST00000420166 CAMTA2O94983 1202 aa26.67■■□□□ 1.86
HMGXB4-203ENST00000420166 FKBP8Q14318 412 aa26.67■■□□□ 1.86
HMGXB4-203ENST00000420166 LRP10Q7Z4F1 713 aa26.67■■□□□ 1.86
HMGXB4-203ENST00000420166 ARXQ96QS3 562 aa26.67■■□□□ 1.86
HMGXB4-203ENST00000420166 BCL2L12Q9HB09 334 aa26.67■■□□□ 1.86
HMGXB4-203ENST00000420166 DDX21Q9NR30 783 aaKnown RBP eCLIP26.67■■□□□ 1.86
HMGXB4-203ENST00000420166 CHPF2Q9P2E5 772 aa26.67■■□□□ 1.86
HMGXB4-203ENST00000420166 ANXA1P04083 346 aa26.66■■□□□ 1.86
HMGXB4-203ENST00000420166 TWISTNBQ3B726 338 aaPredicted RBP26.66■■□□□ 1.86
HMGXB4-203ENST00000420166 PPP1R1BQ9UD71 204 aaPredicted RBP26.66■■□□□ 1.86
HMGXB4-203ENST00000420166 MMP10P09238 476 aa26.65■■□□□ 1.86
HMGXB4-203ENST00000420166 EXOSC9Q06265 439 aaKnown RBP26.65■■□□□ 1.86
HMGXB4-203ENST00000420166 SLFN5Q08AF3 891 aa26.65■■□□□ 1.86
HMGXB4-203ENST00000420166 DBF4Q9UBU7 674 aaPredicted RBP26.65■■□□□ 1.86
HMGXB4-203ENST00000420166 CHMP4AQ9BY43 222 aa26.64■■□□□ 1.86
HMGXB4-203ENST00000420166 CDCA7LQ96GN5 454 aa26.63■■□□□ 1.85
HMGXB4-203ENST00000420166 CCDC30Q5VVM6 783 aa26.62■■□□□ 1.85
HMGXB4-203ENST00000420166 TTLL7Q6ZT98 887 aa26.62■■□□□ 1.85
HMGXB4-203ENST00000420166 NUP98P52948 1817 aa26.61■■□□□ 1.85
HMGXB4-203ENST00000420166 CACNA1FO60840 1977 aa26.6■■□□□ 1.85
HMGXB4-203ENST00000420166 RGL2O15211 777 aa26.6■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms