RNA–Protein interactions for RNA: ENST00000417410.6

SMIM19-203, Transcript of small integral membrane protein 19, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMIM19, Length 1,466 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM19-203ENST00000417410 INTS5Q6P9B9 1019 aaKnown RBP28.69■■■□□ 2.18
SMIM19-203ENST00000417410 ZBTB7AO95365 584 aa28.68■■■□□ 2.18
SMIM19-203ENST00000417410 ADRA2BP18089 450 aa28.68■■■□□ 2.18
SMIM19-203ENST00000417410 TRAPPC3LQ5T215 181 aa28.68■■■□□ 2.18
SMIM19-203ENST00000417410 AMIGO3Q86WK7 504 aa28.68■■■□□ 2.18
SMIM19-203ENST00000417410 EIF4A1P60842 406 aaKnown RBP28.67■■■□□ 2.18
SMIM19-203ENST00000417410 CHL1O00533 1208 aa28.66■■■□□ 2.18
SMIM19-203ENST00000417410 LRP5O75197 1615 aa28.66■■■□□ 2.18
SMIM19-203ENST00000417410 CFAP44Q96MT7 982 aa28.66■■■□□ 2.18
SMIM19-203ENST00000417410 ATF5Q9Y2D1 282 aaPredicted RBP28.66■■■□□ 2.18
SMIM19-203ENST00000417410 LAS1LQ9Y4W2 734 aaKnown RBP28.66■■■□□ 2.18
SMIM19-203ENST00000417410 SMIM5Q71RC9 77 aa28.65■■■□□ 2.18
SMIM19-203ENST00000417410 NGEFQ8N5V2 710 aa28.64■■■□□ 2.17
SMIM19-203ENST00000417410 USP16Q9Y5T5 823 aa28.64■■■□□ 2.17
SMIM19-203ENST00000417410 WWC1Q8IX03 1113 aa28.63■■■□□ 2.17
SMIM19-203ENST00000417410 ARHGEF1Q92888 912 aaKnown RBP28.63■■■□□ 2.17
SMIM19-203ENST00000417410 ZBTB1Q9Y2K1 713 aa28.63■■■□□ 2.17
SMIM19-203ENST00000417410 GIGYF1O75420 1035 aaPredicted RBP28.62■■■□□ 2.17
SMIM19-203ENST00000417410 SENP3-EIF4A1A0A087X0R7 540 aa28.61■■■□□ 2.17
SMIM19-203ENST00000417410 PRAMEF22A3QJZ6 481 aa28.61■■■□□ 2.17
SMIM19-203ENST00000417410 GNAI1P63096 354 aa28.61■■■□□ 2.17
SMIM19-203ENST00000417410 IFT57Q9NWB7 429 aa28.61■■■□□ 2.17
SMIM19-203ENST00000417410 SOS1Q07889 1333 aaPredicted RBP28.61■■■□□ 2.17
SMIM19-203ENST00000417410 ZNF853P0CG23 659 aa28.6■■■□□ 2.17
SMIM19-203ENST00000417410 CANXP27824 592 aaKnown RBP28.6■■■□□ 2.17
SMIM19-203ENST00000417410 RFC4P35249 363 aa28.6■■■□□ 2.17
SMIM19-203ENST00000417410 A1BGP04217 495 aa28.58■■■□□ 2.17
SMIM19-203ENST00000417410 PTGER2P43116 358 aa28.58■■■□□ 2.17
SMIM19-203ENST00000417410 SALL2Q9Y467 1007 aaPredicted RBP28.58■■■□□ 2.17
SMIM19-203ENST00000417410 SGIP1Q9BQI5 828 aa28.57■■■□□ 2.16
SMIM19-203ENST00000417410 COL24A1Q17RW2 1714 aa28.57■■■□□ 2.16
SMIM19-203ENST00000417410 POLD1P28340 1107 aa28.56■■■□□ 2.16
SMIM19-203ENST00000417410 IL6STP40189 918 aaPredicted RBP28.56■■■□□ 2.16
SMIM19-203ENST00000417410 EIF5P55010 431 aaKnown RBP28.56■■■□□ 2.16
SMIM19-203ENST00000417410 MBIPQ9NS73 344 aa28.56■■■□□ 2.16
SMIM19-203ENST00000417410 LAMB4A4D0S4 1761 aa28.56■■■□□ 2.16
SMIM19-203ENST00000417410 COL15A1P39059 1388 aa28.55■■■□□ 2.16
SMIM19-203ENST00000417410 IL16Q14005 1332 aa28.55■■■□□ 2.16
SMIM19-203ENST00000417410 A0A087WZG4 1122 aa28.54■■■□□ 2.16
SMIM19-203ENST00000417410 NPM2Q86SE8 214 aaKnown RBP28.54■■■□□ 2.16
SMIM19-203ENST00000417410 WDR63Q8IWG1 891 aa28.54■■■□□ 2.16
SMIM19-203ENST00000417410 MSL1Q68DK7 614 aa28.53■■■□□ 2.16
SMIM19-203ENST00000417410 PPP1R1BQ9UD71 204 aaPredicted RBP28.53■■■□□ 2.16
SMIM19-203ENST00000417410 C4AP0C0L4 1744 aa28.53■■■□□ 2.16
SMIM19-203ENST00000417410 NLGN1Q8N2Q7 840 aa28.53■■■□□ 2.16
SMIM19-203ENST00000417410 ZPR1O75312 459 aa28.52■■■□□ 2.16
SMIM19-203ENST00000417410 USP42Q9H9J4 1324 aaKnown RBP28.51■■■□□ 2.16
SMIM19-203ENST00000417410 NARFQ9UHQ1 456 aa28.51■■■□□ 2.15
SMIM19-203ENST00000417410 ZNF330Q9Y3S2 320 aaPredicted RBP28.51■■■□□ 2.15
SMIM19-203ENST00000417410 GYS1P13807 737 aa28.5■■■□□ 2.15
SMIM19-203ENST00000417410 HNRNPUQ00839 825 aaKnown RBP eCLIP28.5■■■□□ 2.15
SMIM19-203ENST00000417410 HOXB7P09629 217 aa28.49■■■□□ 2.15
SMIM19-203ENST00000417410 ARXQ96QS3 562 aa28.49■■■□□ 2.15
SMIM19-203ENST00000417410 SRP68Q9UHB9 627 aaKnown RBP28.49■■■□□ 2.15
SMIM19-203ENST00000417410 NBPF26B4DH59 902 aa28.48■■■□□ 2.15
SMIM19-203ENST00000417410 KRT24Q2M2I5 525 aa28.48■■■□□ 2.15
SMIM19-203ENST00000417410 NBPF10Q6P3W6 841 aaKnown RBP28.48■■■□□ 2.15
SMIM19-203ENST00000417410 NBPF15Q8N660 670 aa28.48■■■□□ 2.15
SMIM19-203ENST00000417410 ERBB4Q15303 1308 aa28.48■■■□□ 2.15
SMIM19-203ENST00000417410 EIF2S2P20042 333 aaKnown RBP28.47■■■□□ 2.15
SMIM19-203ENST00000417410 PIP4K2AP48426 406 aaPredicted RBP28.47■■■□□ 2.15
SMIM19-203ENST00000417410 USPL1Q5W0Q7 1092 aa28.46■■■□□ 2.15
SMIM19-203ENST00000417410 DUSP27Q5VZP5 1158 aa28.46■■■□□ 2.15
SMIM19-203ENST00000417410 DZIP3Q86Y13 1208 aaKnown RBP28.44■■■□□ 2.14
SMIM19-203ENST00000417410 TBC1D2BQ9UPU7 963 aa28.44■■■□□ 2.14
SMIM19-203ENST00000417410 TSR2Q969E8 191 aaKnown RBP28.43■■■□□ 2.14
SMIM19-203ENST00000417410 ZNF521Q96K83 1311 aa28.42■■■□□ 2.14
SMIM19-203ENST00000417410 FKBP8Q14318 412 aa28.42■■■□□ 2.14
SMIM19-203ENST00000417410 MMP10P09238 476 aa28.41■■■□□ 2.14
SMIM19-203ENST00000417410 CHMP4AQ9BY43 222 aa28.41■■■□□ 2.14
SMIM19-203ENST00000417410 MYL6BP14649 208 aa28.4■■■□□ 2.14
SMIM19-203ENST00000417410 HDGFL1Q5TGJ6 251 aa28.4■■■□□ 2.14
SMIM19-203ENST00000417410 BCL2L12Q9HB09 334 aa28.4■■■□□ 2.14
SMIM19-203ENST00000417410 PDIA6Q15084 440 aa28.4■■■□□ 2.14
SMIM19-203ENST00000417410 C8orf58Q8NAV2 365 aa28.4■■■□□ 2.14
SMIM19-203ENST00000417410 MYH16Q9H6N6 1097 aa28.4■■■□□ 2.14
SMIM19-203ENST00000417410 ELL2O00472 640 aaPredicted RBP28.39■■■□□ 2.13
SMIM19-203ENST00000417410 CAMTA2O94983 1202 aa28.39■■■□□ 2.13
SMIM19-203ENST00000417410 NECTIN2Q92692 538 aa28.39■■■□□ 2.13
SMIM19-203ENST00000417410 PARP3Q9Y6F1 533 aa28.39■■■□□ 2.13
SMIM19-203ENST00000417410 FANCIQ9NVI1 1328 aa28.38■■■□□ 2.13
SMIM19-203ENST00000417410 GOLGA2Q08379 1002 aa28.38■■■□□ 2.13
SMIM19-203ENST00000417410 FHDC1Q9C0D6 1143 aaPredicted RBP28.38■■■□□ 2.13
SMIM19-203ENST00000417410 RGL2O15211 777 aa28.37■■■□□ 2.13
SMIM19-203ENST00000417410 TM4SF1P30408 202 aa28.37■■■□□ 2.13
SMIM19-203ENST00000417410 DDX21Q9NR30 783 aaKnown RBP eCLIP28.37■■■□□ 2.13
SMIM19-203ENST00000417410 SRCAPQ6ZRS2 3230 aa28.37■■■□□ 2.13
SMIM19-203ENST00000417410 CLEC4GQ6UXB4 293 aa28.36■■■□□ 2.13
SMIM19-203ENST00000417410 DBF4Q9UBU7 674 aaPredicted RBP28.36■■■□□ 2.13
SMIM19-203ENST00000417410 SCN7AQ01118 1682 aa28.36■■■□□ 2.13
SMIM19-203ENST00000417410 SPINK5Q9NQ38 1064 aaPredicted RBP28.35■■■□□ 2.13
SMIM19-203ENST00000417410 LRP10Q7Z4F1 713 aa28.34■■■□□ 2.13
SMIM19-203ENST00000417410 TSPYL6Q8N831 410 aa28.34■■■□□ 2.13
SMIM19-203ENST00000417410 SYT17Q9BSW7 474 aa28.34■■■□□ 2.13
SMIM19-203ENST00000417410 ZNF652Q9Y2D9 606 aa28.34■■■□□ 2.13
SMIM19-203ENST00000417410 ZBED9Q6R2W3 1325 aa28.34■■■□□ 2.13
SMIM19-203ENST00000417410 BCORQ6W2J9 1755 aa28.34■■■□□ 2.13
SMIM19-203ENST00000417410 NFIXQ14938 502 aa28.34■■■□□ 2.13
SMIM19-203ENST00000417410 PROSER3Q2NL68 480 aa28.34■■■□□ 2.13
SMIM19-203ENST00000417410 KIF6Q6ZMV9 814 aa28.34■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms