RNA–Protein interactions for RNA: ENST00000416688.5

CTDSPL-203, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-203ENST00000416688 IPO4Q8TEX9 1081 aaKnown RBP3.96□□□□□ -1.78
CTDSPL-203ENST00000416688 NLRP7Q8WX94 980 aa3.96□□□□□ -1.78
CTDSPL-203ENST00000416688 ZNF512BQ96KM6 892 aaPredicted RBP3.96□□□□□ -1.78
CTDSPL-203ENST00000416688 SRPK1Q96SB4 655 aaKnown RBP3.96□□□□□ -1.78
CTDSPL-203ENST00000416688 IER2Q9BTL4 223 aa3.96□□□□□ -1.78
CTDSPL-203ENST00000416688 SRRTQ9BXP5 876 aaKnown RBP3.96□□□□□ -1.78
CTDSPL-203ENST00000416688 RBCK1Q9BYM8 510 aa3.96□□□□□ -1.78
CTDSPL-203ENST00000416688 PRKD2Q9BZL6 878 aa3.96□□□□□ -1.78
CTDSPL-203ENST00000416688 RSPH9Q9H1X1 276 aaPredicted RBP3.96□□□□□ -1.78
CTDSPL-203ENST00000416688 SIRPGQ9P1W8 387 aa3.96□□□□□ -1.78
CTDSPL-203ENST00000416688 NRBP1Q9UHY1 535 aa3.96□□□□□ -1.78
CTDSPL-203ENST00000416688 RBM19Q9Y4C8 960 aaKnown RBP3.96□□□□□ -1.78
CTDSPL-203ENST00000416688 PCDHB15Q9Y5E8 787 aa3.96□□□□□ -1.78
CTDSPL-203ENST00000416688 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP3.95□□□□□ -1.78
CTDSPL-203ENST00000416688 POTEB3A0JP26 581 aa3.95□□□□□ -1.78
CTDSPL-203ENST00000416688 BICDL2A1A5D9 508 aa3.95□□□□□ -1.78
CTDSPL-203ENST00000416688 TIMM44O43615 452 aa3.95□□□□□ -1.78
CTDSPL-203ENST00000416688 NDUFB5O43674 189 aa3.95□□□□□ -1.78
CTDSPL-203ENST00000416688 HSP90AB1P08238 724 aaKnown RBP3.95□□□□□ -1.78
CTDSPL-203ENST00000416688 FGRP09769 529 aa3.95□□□□□ -1.78
CTDSPL-203ENST00000416688 CD46P15529 392 aa3.95□□□□□ -1.78
CTDSPL-203ENST00000416688 CASP2P42575 452 aa3.95□□□□□ -1.78
CTDSPL-203ENST00000416688 PRIM1P49642 420 aaKnown RBP3.95□□□□□ -1.78
CTDSPL-203ENST00000416688 ATP1A2P50993 1020 aa3.95□□□□□ -1.78
CTDSPL-203ENST00000416688 PLCB3Q01970 1234 aa3.95□□□□□ -1.78
CTDSPL-203ENST00000416688 FMR1Q06787 632 aaKnown RBP eCLIP3.95□□□□□ -1.78
CTDSPL-203ENST00000416688 DPYDQ12882 1025 aa3.95□□□□□ -1.78
CTDSPL-203ENST00000416688 ZKSCAN2Q63HK3 967 aa3.95□□□□□ -1.78
CTDSPL-203ENST00000416688 POTEBQ6S5H4 581 aa3.95□□□□□ -1.78
CTDSPL-203ENST00000416688 TRIM50Q86XT4 487 aa3.95□□□□□ -1.78
CTDSPL-203ENST00000416688 MICALL2Q8IY33 904 aa3.95□□□□□ -1.78
CTDSPL-203ENST00000416688 FTSJ3Q8IY81 847 aaKnown RBP3.95□□□□□ -1.78
CTDSPL-203ENST00000416688 STK11IPQ8N1F8 1099 aa3.95□□□□□ -1.78
CTDSPL-203ENST00000416688 CERKQ8TCT0 537 aa3.95□□□□□ -1.78
CTDSPL-203ENST00000416688 CABLES1Q8TDN4 633 aa3.95□□□□□ -1.78
CTDSPL-203ENST00000416688 GTF3C2Q8WUA4 911 aaPredicted RBP3.95□□□□□ -1.78
CTDSPL-203ENST00000416688 APPBP2Q92624 585 aa3.95□□□□□ -1.78
CTDSPL-203ENST00000416688 UPF1Q92900 1129 aaKnown RBP eCLIP3.95□□□□□ -1.78
CTDSPL-203ENST00000416688 ZNF622Q969S3 477 aaKnown RBP eCLIP3.95□□□□□ -1.78
CTDSPL-203ENST00000416688 MARVELD3Q96A59 401 aa3.95□□□□□ -1.78
CTDSPL-203ENST00000416688 RNPC3Q96LT9 517 aaKnown RBP3.95□□□□□ -1.78
CTDSPL-203ENST00000416688 FAM161BQ96MY7 647 aa3.95□□□□□ -1.78
CTDSPL-203ENST00000416688 CITED4Q96RK1 184 aa3.95□□□□□ -1.78
CTDSPL-203ENST00000416688 DUSP9Q99956 384 aaKnown RBP3.95□□□□□ -1.78
CTDSPL-203ENST00000416688 ZNF700Q9H0M5 742 aa3.95□□□□□ -1.78
CTDSPL-203ENST00000416688 CXXC1Q9P0U4 656 aaPredicted RBP3.95□□□□□ -1.78
CTDSPL-203ENST00000416688 DDX41Q9UJV9 622 aaKnown RBP3.95□□□□□ -1.78
CTDSPL-203ENST00000416688 NAP1L2Q9ULW6 460 aaPredicted RBP3.95□□□□□ -1.78
CTDSPL-203ENST00000416688 CCDC163A0A0D9SF12 145 aa3.94□□□□□ -1.78
CTDSPL-203ENST00000416688 CLGNO14967 610 aa3.94□□□□□ -1.78
CTDSPL-203ENST00000416688 TREHO43280 583 aa3.94□□□□□ -1.78
CTDSPL-203ENST00000416688 EVI5O60447 810 aa3.94□□□□□ -1.78
CTDSPL-203ENST00000416688 FAM13AO94988 1023 aa3.94□□□□□ -1.78
CTDSPL-203ENST00000416688 NDUFV2P19404 249 aa3.94□□□□□ -1.78
CTDSPL-203ENST00000416688 SCNN1AP37088 669 aa3.94□□□□□ -1.78
CTDSPL-203ENST00000416688 TRAPPC10P48553 1259 aa3.94□□□□□ -1.78
CTDSPL-203ENST00000416688 RASSF7Q02833 373 aa3.94□□□□□ -1.78
CTDSPL-203ENST00000416688 NR1H3Q13133 447 aa3.94□□□□□ -1.78
CTDSPL-203ENST00000416688 KCTD2Q14681 263 aa3.94□□□□□ -1.78
CTDSPL-203ENST00000416688 TTC39BQ5VTQ0 682 aaPredicted RBP3.94□□□□□ -1.78
CTDSPL-203ENST00000416688 TMC7Q7Z402 723 aa3.94□□□□□ -1.78
CTDSPL-203ENST00000416688 LRP10Q7Z4F1 713 aa3.94□□□□□ -1.78
CTDSPL-203ENST00000416688 USP48Q86UV5 1035 aa3.94□□□□□ -1.78
CTDSPL-203ENST00000416688 HOMER1Q86YM7 354 aa3.94□□□□□ -1.78
CTDSPL-203ENST00000416688 SLF2Q8IX21 1173 aa3.94□□□□□ -1.78
CTDSPL-203ENST00000416688 DEPDC4Q8N2C3 294 aa3.94□□□□□ -1.78
CTDSPL-203ENST00000416688 TEX19Q8NA77 164 aa3.94□□□□□ -1.78
CTDSPL-203ENST00000416688 TMC1Q8TDI8 760 aa3.94□□□□□ -1.78
CTDSPL-203ENST00000416688 CDC5LQ99459 802 aaKnown RBP3.94□□□□□ -1.78
CTDSPL-203ENST00000416688 TRIM55Q9BYV6 548 aa3.94□□□□□ -1.78
CTDSPL-203ENST00000416688 CDHR5Q9HBB8 845 aa3.94□□□□□ -1.78
CTDSPL-203ENST00000416688 ADGRG1Q9Y653 693 aa3.94□□□□□ -1.78
CTDSPL-203ENST00000416688 RPGRIP1LQ68CZ1 1315 aa3.94□□□□□ -1.78
CTDSPL-203ENST00000416688 TTC36A6NLP5 189 aa3.93□□□□□ -1.78
CTDSPL-203ENST00000416688 PIK3CDO00329 1044 aa3.93□□□□□ -1.78
CTDSPL-203ENST00000416688 GOLIM4O00461 696 aa3.93□□□□□ -1.78
CTDSPL-203ENST00000416688 PTCD1O75127 700 aaKnown RBP3.93□□□□□ -1.78
CTDSPL-203ENST00000416688 ATF4P18848 351 aaPredicted RBP3.93□□□□□ -1.78
CTDSPL-203ENST00000416688 MAPK8P45983 427 aa3.93□□□□□ -1.78
CTDSPL-203ENST00000416688 EPHB1P54762 984 aa3.93□□□□□ -1.78
CTDSPL-203ENST00000416688 SERINC3Q13530 473 aa3.93□□□□□ -1.78
CTDSPL-203ENST00000416688 SLFNL1Q499Z3 407 aa3.93□□□□□ -1.78
CTDSPL-203ENST00000416688 SVIPQ8NHG7 77 aa3.93□□□□□ -1.78
CTDSPL-203ENST00000416688 SNRNP27Q8WVK2 155 aaKnown RBP3.93□□□□□ -1.78
CTDSPL-203ENST00000416688 DMRTB1Q96MA1 342 aa3.93□□□□□ -1.78
CTDSPL-203ENST00000416688 ARNT2Q9HBZ2 717 aa3.93□□□□□ -1.78
CTDSPL-203ENST00000416688 FANCLQ9NW38 375 aa3.93□□□□□ -1.78
CTDSPL-203ENST00000416688 NOD1Q9Y239 953 aa3.93□□□□□ -1.78
CTDSPL-203ENST00000416688 LZTS1Q9Y250 596 aa3.93□□□□□ -1.78
CTDSPL-203ENST00000416688 G3V3G9 751 aa3.92□□□□□ -1.78
CTDSPL-203ENST00000416688 TBX3O15119 743 aa3.92□□□□□ -1.78
CTDSPL-203ENST00000416688 SSBP05455 408 aaKnown RBP eCLIP3.92□□□□□ -1.78
CTDSPL-203ENST00000416688 GJA8P48165 433 aa3.92□□□□□ -1.78
CTDSPL-203ENST00000416688 USP46P62068 366 aa3.92□□□□□ -1.78
CTDSPL-203ENST00000416688 NCOA4Q13772 614 aa3.92□□□□□ -1.78
CTDSPL-203ENST00000416688 SETDB1Q15047 1291 aa3.92□□□□□ -1.78
CTDSPL-203ENST00000416688 ECM1Q16610 540 aa3.92□□□□□ -1.78
CTDSPL-203ENST00000416688 EML3Q32P44 896 aa3.92□□□□□ -1.78
CTDSPL-203ENST00000416688 TBC1D10BQ4KMP7 808 aaPredicted RBP3.92□□□□□ -1.78
CTDSPL-203ENST00000416688 SYCP2LQ5T4T6 812 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms