RNA–Protein interactions for RNA: ENST00000416688.5

CTDSPL-203, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-203ENST00000416688 AEBP2Q6ZN18 517 aaPredicted RBP8.85□□□□□ -0.99
CTDSPL-203ENST00000416688 CHIC1Q5VXU3 224 aa8.41□□□□□ -1.06
CTDSPL-203ENST00000416688 SENP3Q9H4L4 574 aaPredicted RBP7.47□□□□□ -1.21
CTDSPL-203ENST00000416688 PHF23Q9BUL5 403 aaPredicted RBP7.41□□□□□ -1.22
CTDSPL-203ENST00000416688 FOXD1Q16676 465 aa7.01□□□□□ -1.29
CTDSPL-203ENST00000416688 SLC24A1O60721 1099 aa6.77□□□□□ -1.33
CTDSPL-203ENST00000416688 PLPPR3Q6T4P5 718 aa6.7□□□□□ -1.34
CTDSPL-203ENST00000416688 PPP6R1Q9UPN7 881 aa6.61□□□□□ -1.35
CTDSPL-203ENST00000416688 ADRA2BP18089 450 aa6.56□□□□□ -1.36
CTDSPL-203ENST00000416688 EHMT2Q96KQ7 1210 aa6.54□□□□□ -1.36
CTDSPL-203ENST00000416688 PIAS4Q8N2W9 510 aaPredicted RBP6.51□□□□□ -1.37
CTDSPL-203ENST00000416688 MSH5O43196 834 aa6.49□□□□□ -1.37
CTDSPL-203ENST00000416688 POTEDQ86YR6 584 aa6.31□□□□□ -1.4
CTDSPL-203ENST00000416688 AMER1Q5JTC6 1135 aaPredicted RBP6.26□□□□□ -1.41
CTDSPL-203ENST00000416688 RTN4Q9NQC3 1192 aaKnown RBP6.18□□□□□ -1.42
CTDSPL-203ENST00000416688 CSRNP3Q8WYN3 585 aa6.12□□□□□ -1.43
CTDSPL-203ENST00000416688 NCBP3Q53F19 620 aaKnown RBP6.11□□□□□ -1.43
CTDSPL-203ENST00000416688 KCNA4P22459 653 aa6.09□□□□□ -1.43
CTDSPL-203ENST00000416688 DAXXQ9UER7 740 aaPredicted RBP6.05□□□□□ -1.44
CTDSPL-203ENST00000416688 MAPK8IP2Q13387 824 aaPredicted RBP6.02□□□□□ -1.45
CTDSPL-203ENST00000416688 SLC4A1APQ9BWU0 796 aaKnown RBP5.98□□□□□ -1.45
CTDSPL-203ENST00000416688 DMRT2Q9Y5R5 561 aa5.96□□□□□ -1.46
CTDSPL-203ENST00000416688 SCAF1Q9H7N4 1312 aaKnown RBP5.94□□□□□ -1.46
CTDSPL-203ENST00000416688 PPP4R3CPQ6ZMV5 832 aa5.89□□□□□ -1.47
CTDSPL-203ENST00000416688 ARXQ96QS3 562 aa5.86□□□□□ -1.47
CTDSPL-203ENST00000416688 BCANQ96GW7 911 aa5.81□□□□□ -1.48
CTDSPL-203ENST00000416688 HOXD11P31277 338 aaPredicted RBP5.77□□□□□ -1.49
CTDSPL-203ENST00000416688 CNKSR2Q8WXI2 1034 aa5.77□□□□□ -1.49
CTDSPL-203ENST00000416688 PRKCSHP14314 528 aaPredicted RBP5.75□□□□□ -1.49
CTDSPL-203ENST00000416688 TAOK2Q9UL54 1235 aa5.75□□□□□ -1.49
CTDSPL-203ENST00000416688 ERICH6Q7L0X2 663 aa5.73□□□□□ -1.49
CTDSPL-203ENST00000416688 RNF216Q9NWF9 866 aaPredicted RBP5.72□□□□□ -1.49
CTDSPL-203ENST00000416688 RANGAP1P46060 587 aaPredicted RBP5.69□□□□□ -1.5
CTDSPL-203ENST00000416688 PLCB2Q00722 1185 aa5.69□□□□□ -1.5
CTDSPL-203ENST00000416688 HOMEZQ8IX15 550 aa5.67□□□□□ -1.5
CTDSPL-203ENST00000416688 TTBK1Q5TCY1 1321 aaPredicted RBP5.65□□□□□ -1.51
CTDSPL-203ENST00000416688 DCAF8L1A6NGE4 600 aa5.64□□□□□ -1.51
CTDSPL-203ENST00000416688 TIMELESSQ9UNS1 1208 aa5.64□□□□□ -1.51
CTDSPL-203ENST00000416688 TPRNQ4KMQ1 711 aa5.63□□□□□ -1.51
CTDSPL-203ENST00000416688 TULP1O00294 542 aaPredicted RBP5.62□□□□□ -1.51
CTDSPL-203ENST00000416688 HAP1P54257 671 aaPredicted RBP5.62□□□□□ -1.51
CTDSPL-203ENST00000416688 NPM3O75607 178 aaKnown RBP5.61□□□□□ -1.51
CTDSPL-203ENST00000416688 MYT1Q01538 1121 aa5.61□□□□□ -1.51
CTDSPL-203ENST00000416688 PELP1Q8IZL8 1130 aaKnown RBP5.61□□□□□ -1.51
CTDSPL-203ENST00000416688 RNF39Q9H2S5 420 aa5.58□□□□□ -1.52
CTDSPL-203ENST00000416688 ZBTB22O15209 634 aa5.57□□□□□ -1.52
CTDSPL-203ENST00000416688 VSIG10Q8N0Z9 540 aa5.57□□□□□ -1.52
CTDSPL-203ENST00000416688 DNAJC5BQ9UF47 199 aa5.56□□□□□ -1.52
CTDSPL-203ENST00000416688 GTF3C3Q9Y5Q9 886 aa5.56□□□□□ -1.52
CTDSPL-203ENST00000416688 CACNB1Q02641 598 aaPredicted RBP5.54□□□□□ -1.52
CTDSPL-203ENST00000416688 FKBP8Q14318 412 aa5.54□□□□□ -1.52
CTDSPL-203ENST00000416688 APLP2Q06481 763 aa5.48□□□□□ -1.53
CTDSPL-203ENST00000416688 C1QBPQ07021 282 aaKnown RBP5.48□□□□□ -1.53
CTDSPL-203ENST00000416688 FOXD4L1Q9NU39 408 aa5.47□□□□□ -1.53
CTDSPL-203ENST00000416688 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.43□□□□□ -1.54
CTDSPL-203ENST00000416688 PODXL2Q9NZ53 605 aa5.43□□□□□ -1.54
CTDSPL-203ENST00000416688 C14orf37Q86TY3 774 aa5.41□□□□□ -1.54
CTDSPL-203ENST00000416688 TMEM132AQ24JP5 1023 aa5.4□□□□□ -1.54
CTDSPL-203ENST00000416688 SLC4A2P04920 1241 aa5.38□□□□□ -1.55
CTDSPL-203ENST00000416688 DCAF8L2P0C7V8 631 aa5.38□□□□□ -1.55
CTDSPL-203ENST00000416688 U3KPZ7 1027 aaPredicted RBP5.38□□□□□ -1.55
CTDSPL-203ENST00000416688 FBXO3Q9UK99 471 aa5.37□□□□□ -1.55
CTDSPL-203ENST00000416688 NPM2Q86SE8 214 aaKnown RBP5.34□□□□□ -1.55
CTDSPL-203ENST00000416688 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.33□□□□□ -1.56
CTDSPL-203ENST00000416688 KDM2AQ9Y2K7 1162 aa5.32□□□□□ -1.56
CTDSPL-203ENST00000416688 NBR1Q14596 966 aa5.3□□□□□ -1.56
CTDSPL-203ENST00000416688 SPINK5Q9NQ38 1064 aaPredicted RBP5.29□□□□□ -1.56
CTDSPL-203ENST00000416688 KLHL34Q8N239 644 aa5.27□□□□□ -1.57
CTDSPL-203ENST00000416688 ATXN8OSP0DMR3 200 aa5.26□□□□□ -1.57
CTDSPL-203ENST00000416688 FBLN2P98095 1184 aa5.26□□□□□ -1.57
CTDSPL-203ENST00000416688 BBXQ8WY36 941 aaPredicted RBP5.25□□□□□ -1.57
CTDSPL-203ENST00000416688 DSG3P32926 999 aa5.24□□□□□ -1.57
CTDSPL-203ENST00000416688 CAPN15O75808 1086 aa5.22□□□□□ -1.57
CTDSPL-203ENST00000416688 PAXIP1Q6ZW49 1069 aaPredicted RBP5.22□□□□□ -1.57
CTDSPL-203ENST00000416688 CFAP44Q96MT7 982 aa5.21□□□□□ -1.58
CTDSPL-203ENST00000416688 SUPT5HO00267 1087 aaKnown RBP5.19□□□□□ -1.58
CTDSPL-203ENST00000416688 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.17□□□□□ -1.58
CTDSPL-203ENST00000416688 HNRNPUL2Q1KMD3 747 aaKnown RBP5.17□□□□□ -1.58
CTDSPL-203ENST00000416688 EIF5BO60841 1220 aaKnown RBP5.16□□□□□ -1.58
CTDSPL-203ENST00000416688 MYCNP04198 464 aaPredicted RBP5.16□□□□□ -1.58
CTDSPL-203ENST00000416688 TRIM26Q12899 539 aaPredicted RBP5.16□□□□□ -1.58
CTDSPL-203ENST00000416688 SAMD1Q6SPF0 538 aaPredicted RBP5.16□□□□□ -1.58
CTDSPL-203ENST00000416688 TRHP20396 242 aaPredicted RBP5.15□□□□□ -1.59
CTDSPL-203ENST00000416688 SPRYD3Q8NCJ5 442 aa5.15□□□□□ -1.59
CTDSPL-203ENST00000416688 ZNF219Q9P2Y4 722 aaPredicted RBP5.14□□□□□ -1.59
CTDSPL-203ENST00000416688 ABCB7O75027 752 aa5.13□□□□□ -1.59
CTDSPL-203ENST00000416688 TSHZ2Q9NRE2 1034 aa5.12□□□□□ -1.59
CTDSPL-203ENST00000416688 UBTFP17480 764 aaKnown RBP5.11□□□□□ -1.59
CTDSPL-203ENST00000416688 PKD2Q13563 968 aa5.11□□□□□ -1.59
CTDSPL-203ENST00000416688 ATF5Q9Y2D1 282 aaPredicted RBP5.1□□□□□ -1.59
CTDSPL-203ENST00000416688 CCDC9Q9Y3X0 531 aaKnown RBP5.1□□□□□ -1.59
CTDSPL-203ENST00000416688 HMGB1P09429 215 aaKnown RBP5.09□□□□□ -1.59
CTDSPL-203ENST00000416688 HRCP23327 699 aa5.08□□□□□ -1.6
CTDSPL-203ENST00000416688 VASPP50552 380 aaPredicted RBP5.08□□□□□ -1.6
CTDSPL-203ENST00000416688 DNAJC5Q9H3Z4 198 aa5.07□□□□□ -1.6
CTDSPL-203ENST00000416688 ZBTB7CA1YPR0 619 aa5.06□□□□□ -1.6
CTDSPL-203ENST00000416688 POLA2Q14181 598 aa5.05□□□□□ -1.6
CTDSPL-203ENST00000416688 NPM1P06748 294 aaKnown RBP eCLIP5.04□□□□□ -1.6
CTDSPL-203ENST00000416688 SHROOM4Q9ULL8 1493 aa5.02□□□□□ -1.61
CTDSPL-203ENST00000416688 IFNLR1Q8IU57 520 aaPredicted RBP5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms