RNA–Protein interactions for RNA: ENSMUST00000206914.1

Rnf40-206, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

TSL 5 BASIC

Gene Rnf40, Length 3,735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-206ENSMUST00000206914 Prim1P20664 417 aa12.95□□□□□ -0.34
Rnf40-206ENSMUST00000206914 Fam83gQ5SWY7 812 aa12.95□□□□□ -0.34
Rnf40-206ENSMUST00000206914 Bms1Q6PGF5 1284 aaKnown RBP12.95□□□□□ -0.34
Rnf40-206ENSMUST00000206914 Fam13bQ8K2H3 851 aa12.95□□□□□ -0.34
Rnf40-206ENSMUST00000206914 Znf335A2A5K6 1337 aa12.95□□□□□ -0.34
Rnf40-206ENSMUST00000206914 1700006A11RikB9EHI3 544 aa12.95□□□□□ -0.34
Rnf40-206ENSMUST00000206914 Nol12Q8BG17 217 aa12.95□□□□□ -0.34
Rnf40-206ENSMUST00000206914 Dhx30Q99PU8 1217 aaKnown RBP12.95□□□□□ -0.34
Rnf40-206ENSMUST00000206914 Mmel1Q9JLI3 765 aa12.95□□□□□ -0.34
Rnf40-206ENSMUST00000206914 Cct4P80315 539 aaKnown RBP12.94□□□□□ -0.34
Rnf40-206ENSMUST00000206914 Cfap157Q0VFX2 523 aa12.94□□□□□ -0.34
Rnf40-206ENSMUST00000206914 Unc5clQ6R653 518 aa12.94□□□□□ -0.34
Rnf40-206ENSMUST00000206914 Cps1Q8C196 1500 aa12.94□□□□□ -0.34
Rnf40-206ENSMUST00000206914 Pde3bQ61409 1100 aa12.94□□□□□ -0.34
Rnf40-206ENSMUST00000206914 IbspQ61711 324 aa12.94□□□□□ -0.34
Rnf40-206ENSMUST00000206914 CemipQ8BI06 1361 aa12.94□□□□□ -0.34
Rnf40-206ENSMUST00000206914 RdxP26043 583 aaKnown RBP12.93□□□□□ -0.34
Rnf40-206ENSMUST00000206914 Oxsr1Q6P9R2 527 aa12.93□□□□□ -0.34
Rnf40-206ENSMUST00000206914 Nup88Q8CEC0 753 aaKnown RBP12.93□□□□□ -0.34
Rnf40-206ENSMUST00000206914 Nop14Q8R3N1 860 aaKnown RBP12.93□□□□□ -0.34
Rnf40-206ENSMUST00000206914 Sirt1Q923E4 737 aa12.93□□□□□ -0.34
Rnf40-206ENSMUST00000206914 Trim30aP15533 496 aa12.93□□□□□ -0.34
Rnf40-206ENSMUST00000206914 Foxp4Q9DBY0 795 aaKnown RBP12.93□□□□□ -0.34
Rnf40-206ENSMUST00000206914 Igbp1bQ9QZ29 343 aa12.93□□□□□ -0.34
Rnf40-206ENSMUST00000206914 Syt1P46096 421 aa12.93□□□□□ -0.34
Rnf40-206ENSMUST00000206914 Zkscan7E9PVW1 718 aa12.92□□□□□ -0.34
Rnf40-206ENSMUST00000206914 Rufy3Q9D394 469 aa12.92□□□□□ -0.34
Rnf40-206ENSMUST00000206914 Ttc27Q8CD92 847 aa12.92□□□□□ -0.34
Rnf40-206ENSMUST00000206914 Pof1bQ8K4L4 587 aa12.92□□□□□ -0.34
Rnf40-206ENSMUST00000206914 Cdkn1cP49919 348 aa12.91□□□□□ -0.34
Rnf40-206ENSMUST00000206914 Rbm42Q91V81 474 aaKnown RBP12.91□□□□□ -0.34
Rnf40-206ENSMUST00000206914 Tbc1d8Q9Z1A9 1134 aa12.91□□□□□ -0.34
Rnf40-206ENSMUST00000206914 Zfp804bA0A0G2JGH6 1343 aa12.91□□□□□ -0.34
Rnf40-206ENSMUST00000206914 Wdr33Q8K4P0 1330 aaKnown RBP12.91□□□□□ -0.34
Rnf40-206ENSMUST00000206914 Dync1i1O88485 628 aa12.91□□□□□ -0.34
Rnf40-206ENSMUST00000206914 Chrna2Q91X60 512 aa12.91□□□□□ -0.34
Rnf40-206ENSMUST00000206914 NaspQ99MD9 773 aaKnown RBP12.91□□□□□ -0.34
Rnf40-206ENSMUST00000206914 Mlh1Q9JK91 760 aa12.91□□□□□ -0.34
Rnf40-206ENSMUST00000206914 Myo5bP21271 1818 aa12.91□□□□□ -0.34
Rnf40-206ENSMUST00000206914 NalcnQ8BXR5 1738 aa12.91□□□□□ -0.34
Rnf40-206ENSMUST00000206914 Usp25P57080 1055 aa12.91□□□□□ -0.34
Rnf40-206ENSMUST00000206914 Psme1P97371 249 aa12.91□□□□□ -0.34
Rnf40-206ENSMUST00000206914 Rab3gap1Q80UJ7 981 aa12.91□□□□□ -0.34
Rnf40-206ENSMUST00000206914 Afap1Q80YS6 731 aa12.91□□□□□ -0.34
Rnf40-206ENSMUST00000206914 Plcd3Q8K2J0 785 aa12.91□□□□□ -0.34
Rnf40-206ENSMUST00000206914 Mcm3P25206 812 aaKnown RBP12.9□□□□□ -0.34
Rnf40-206ENSMUST00000206914 Sass6Q80UK7 654 aa12.9□□□□□ -0.34
Rnf40-206ENSMUST00000206914 Wdr24Q8CFJ9 790 aa12.9□□□□□ -0.34
Rnf40-206ENSMUST00000206914 Add2Q9QYB8 725 aa12.9□□□□□ -0.34
Rnf40-206ENSMUST00000206914 Trpm3Q5F4S9 1721 aa12.9□□□□□ -0.34
Rnf40-206ENSMUST00000206914 Disp3A3KFU9 1347 aa12.9□□□□□ -0.34
Rnf40-206ENSMUST00000206914 Atf5O70191 283 aa12.9□□□□□ -0.34
Rnf40-206ENSMUST00000206914 Nap1l3Q794H2 544 aa12.9□□□□□ -0.34
Rnf40-206ENSMUST00000206914 Top1mtQ8R4U6 593 aa12.9□□□□□ -0.34
Rnf40-206ENSMUST00000206914 Hmgn5Q9JL35 406 aa12.9□□□□□ -0.34
Rnf40-206ENSMUST00000206914 Add3Q9QYB5 706 aaKnown RBP12.9□□□□□ -0.34
Rnf40-206ENSMUST00000206914 Mybbp1aQ7TPV4 1344 aaKnown RBP12.9□□□□□ -0.34
Rnf40-206ENSMUST00000206914 Naa30Q8CES0 364 aa12.9□□□□□ -0.34
Rnf40-206ENSMUST00000206914 Asxl2Q8BZ32 1370 aa12.9□□□□□ -0.35
Rnf40-206ENSMUST00000206914 Ier5O89113 308 aa12.89□□□□□ -0.35
Rnf40-206ENSMUST00000206914 HypkQ9CR41 129 aa12.89□□□□□ -0.35
Rnf40-206ENSMUST00000206914 Q9D9S1 216 aa12.89□□□□□ -0.35
Rnf40-206ENSMUST00000206914 Ptpn23Q6PB44 1692 aa12.89□□□□□ -0.35
Rnf40-206ENSMUST00000206914 Tpd52l1O54818 204 aa12.89□□□□□ -0.35
Rnf40-206ENSMUST00000206914 Tti2Q8BGV4 512 aa12.89□□□□□ -0.35
Rnf40-206ENSMUST00000206914 Cbx1P83917 185 aaKnown RBP12.89□□□□□ -0.35
Rnf40-206ENSMUST00000206914 Zeb2Q9R0G7 1215 aa12.89□□□□□ -0.35
Rnf40-206ENSMUST00000206914 Atp8b3Q6UQ17 1335 aa12.88□□□□□ -0.35
Rnf40-206ENSMUST00000206914 Ppfia1B2RXQ2 1266 aa12.88□□□□□ -0.35
Rnf40-206ENSMUST00000206914 Gm156Q58A37 223 aa12.88□□□□□ -0.35
Rnf40-206ENSMUST00000206914 Snx13Q6PHS6 957 aa12.88□□□□□ -0.35
Rnf40-206ENSMUST00000206914 Kcnf1Q7TSH7 493 aa12.88□□□□□ -0.35
Rnf40-206ENSMUST00000206914 Spata31d1bE9QA57 1361 aa12.88□□□□□ -0.35
Rnf40-206ENSMUST00000206914 Pik3c2bE9QAN8 1632 aa12.88□□□□□ -0.35
Rnf40-206ENSMUST00000206914 Serpina10Q8R121 448 aa12.88□□□□□ -0.35
Rnf40-206ENSMUST00000206914 Fam43aQ8BUP8 424 aa12.88□□□□□ -0.35
Rnf40-206ENSMUST00000206914 Kiaa0754Q69ZZ9 979 aa12.87□□□□□ -0.35
Rnf40-206ENSMUST00000206914 CtifQ6PEE2 600 aaKnown RBP12.87□□□□□ -0.35
Rnf40-206ENSMUST00000206914 Plppr3Q7TPB0 716 aa12.87□□□□□ -0.35
Rnf40-206ENSMUST00000206914 Bmp2kQ91Z96 1138 aa12.87□□□□□ -0.35
Rnf40-206ENSMUST00000206914 Atg3Q9CPX6 314 aa12.87□□□□□ -0.35
Rnf40-206ENSMUST00000206914 Mad1l1Q9WTX8 717 aaKnown RBP12.87□□□□□ -0.35
Rnf40-206ENSMUST00000206914 Ubn2Q80WC1 1314 aa12.87□□□□□ -0.35
Rnf40-206ENSMUST00000206914 Parp14Q2EMV9 1817 aa12.87□□□□□ -0.35
Rnf40-206ENSMUST00000206914 Rad17Q6NXW6 688 aa12.87□□□□□ -0.35
Rnf40-206ENSMUST00000206914 DpydQ8CHR6 1025 aa12.87□□□□□ -0.35
Rnf40-206ENSMUST00000206914 Sytl4Q9R0Q1 673 aa12.87□□□□□ -0.35
Rnf40-206ENSMUST00000206914 Stk3Q9JI10 497 aa12.87□□□□□ -0.35
Rnf40-206ENSMUST00000206914 Pnpla7A2AJ88 1352 aa12.86□□□□□ -0.35
Rnf40-206ENSMUST00000206914 Usp48Q3V0C5 1052 aa12.86□□□□□ -0.35
Rnf40-206ENSMUST00000206914 Oas2E9Q9A9 742 aa12.86□□□□□ -0.35
Rnf40-206ENSMUST00000206914 TimelessQ9R1X4 1197 aa12.86□□□□□ -0.35
Rnf40-206ENSMUST00000206914 Cnksr1A2A9K7 700 aa12.86□□□□□ -0.35
Rnf40-206ENSMUST00000206914 Cd22P35329 862 aa12.86□□□□□ -0.35
Rnf40-206ENSMUST00000206914 Eya1P97767 591 aa12.86□□□□□ -0.35
Rnf40-206ENSMUST00000206914 EappQ5BU09 281 aa12.86□□□□□ -0.35
Rnf40-206ENSMUST00000206914 Brf1Q8CFK2 676 aa12.86□□□□□ -0.35
Rnf40-206ENSMUST00000206914 Aox1O54754 1333 aa12.86□□□□□ -0.35
Rnf40-206ENSMUST00000206914 Evi5lH3BKQ3 813 aa12.85□□□□□ -0.35
Rnf40-206ENSMUST00000206914 Ms4a1P19437 291 aa12.85□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 22.8 ms