RNA–Protein interactions for RNA: ENSMUST00000042012.6

Sf3b3-201, Transcript of Splicing factor 3B subunit 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b3, Length 4,525 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b3-201ENSMUST00000042012 CltaO08585 235 aa10.87□□□□□ -0.67
Sf3b3-201ENSMUST00000042012 Ltv1Q6NSQ7 470 aaKnown RBP10.87□□□□□ -0.67
Sf3b3-201ENSMUST00000042012 Zscan20B2KFW1 1030 aa10.87□□□□□ -0.67
Sf3b3-201ENSMUST00000042012 Prkar2bP31324 416 aa10.87□□□□□ -0.67
Sf3b3-201ENSMUST00000042012 Peg3Q3URU2 1571 aa10.87□□□□□ -0.67
Sf3b3-201ENSMUST00000042012 Slc27a3O88561 667 aa10.87□□□□□ -0.67
Sf3b3-201ENSMUST00000042012 FosbP13346 338 aa10.87□□□□□ -0.67
Sf3b3-201ENSMUST00000042012 Atp2b3Q0VF55 1220 aa10.87□□□□□ -0.67
Sf3b3-201ENSMUST00000042012 Spty2d1Q68FG3 682 aa10.87□□□□□ -0.67
Sf3b3-201ENSMUST00000042012 Rnf41Q8BH75 317 aa10.87□□□□□ -0.67
Sf3b3-201ENSMUST00000042012 Pcdhb5Q91XZ5 792 aa10.87□□□□□ -0.67
Sf3b3-201ENSMUST00000042012 Unc13aQ4KUS2 1712 aa10.87□□□□□ -0.67
Sf3b3-201ENSMUST00000042012 Stox1B2RQL2 990 aa10.87□□□□□ -0.67
Sf3b3-201ENSMUST00000042012 Zap70P43404 618 aa10.87□□□□□ -0.67
Sf3b3-201ENSMUST00000042012 GalcP54818 684 aa10.87□□□□□ -0.67
Sf3b3-201ENSMUST00000042012 Cops6O88545 324 aa10.86□□□□□ -0.67
Sf3b3-201ENSMUST00000042012 Prkab2Q6PAM0 271 aa10.86□□□□□ -0.67
Sf3b3-201ENSMUST00000042012 Asic4Q7TNS7 539 aa10.86□□□□□ -0.67
Sf3b3-201ENSMUST00000042012 Ppp1r42Q8R1Z4 357 aa10.86□□□□□ -0.67
Sf3b3-201ENSMUST00000042012 Tubb6Q922F4 447 aa10.86□□□□□ -0.67
Sf3b3-201ENSMUST00000042012 Lmbr1lQ9D1E5 489 aa10.86□□□□□ -0.67
Sf3b3-201ENSMUST00000042012 Q9D9S1 216 aa10.86□□□□□ -0.67
Sf3b3-201ENSMUST00000042012 Dnmt1P13864 1620 aaKnown RBP10.86□□□□□ -0.67
Sf3b3-201ENSMUST00000042012 Kif3aP28741 701 aa10.86□□□□□ -0.67
Sf3b3-201ENSMUST00000042012 Snrpa1P57784 255 aaKnown RBP10.86□□□□□ -0.67
Sf3b3-201ENSMUST00000042012 Ints3Q7TPD0 1041 aaKnown RBP10.86□□□□□ -0.67
Sf3b3-201ENSMUST00000042012 Stxbp4Q9WV89 557 aa10.86□□□□□ -0.67
Sf3b3-201ENSMUST00000042012 Erich3F6QRE9 1637 aa10.86□□□□□ -0.67
Sf3b3-201ENSMUST00000042012 Golim4Q8BXA1 655 aa10.86□□□□□ -0.67
Sf3b3-201ENSMUST00000042012 Slc4a2P13808 1237 aaKnown RBP10.85□□□□□ -0.67
Sf3b3-201ENSMUST00000042012 Top1mtQ8R4U6 593 aa10.85□□□□□ -0.67
Sf3b3-201ENSMUST00000042012 Cul5Q9D5V5 780 aa10.85□□□□□ -0.67
Sf3b3-201ENSMUST00000042012 Pdcd6ipQ9WU78 869 aaKnown RBP10.85□□□□□ -0.67
Sf3b3-201ENSMUST00000042012 Pard3Q99NH2 1333 aa10.85□□□□□ -0.67
Sf3b3-201ENSMUST00000042012 ScaperF8VQ70 1398 aaKnown RBP10.85□□□□□ -0.67
Sf3b3-201ENSMUST00000042012 Kdm6aO70546 1401 aa10.85□□□□□ -0.67
Sf3b3-201ENSMUST00000042012 Ppp1r1bQ60829 194 aa10.85□□□□□ -0.67
Sf3b3-201ENSMUST00000042012 Dcaf5Q80T85 946 aa10.85□□□□□ -0.67
Sf3b3-201ENSMUST00000042012 Hook1Q8BIL5 728 aa10.85□□□□□ -0.67
Sf3b3-201ENSMUST00000042012 Kdm5cP41230 1554 aa10.85□□□□□ -0.67
Sf3b3-201ENSMUST00000042012 Grm8P47743 908 aa10.85□□□□□ -0.67
Sf3b3-201ENSMUST00000042012 Ccdc39Q9D5Y1 937 aa10.85□□□□□ -0.67
Sf3b3-201ENSMUST00000042012 Spryd3E9Q9B3 442 aa10.84□□□□□ -0.67
Sf3b3-201ENSMUST00000042012 Dctn1O08788 1281 aa10.84□□□□□ -0.67
Sf3b3-201ENSMUST00000042012 Igf2bp2Q5SF07 592 aaKnown RBP10.84□□□□□ -0.67
Sf3b3-201ENSMUST00000042012 Maco1Q7TQE6 664 aaKnown RBP10.84□□□□□ -0.67
Sf3b3-201ENSMUST00000042012 Fam160b2Q80YR2 744 aa10.84□□□□□ -0.67
Sf3b3-201ENSMUST00000042012 Slc39a6Q8C145 765 aa10.84□□□□□ -0.67
Sf3b3-201ENSMUST00000042012 ParnQ8VDG3 624 aa10.84□□□□□ -0.67
Sf3b3-201ENSMUST00000042012 Tbc1d7Q9D0K0 293 aa10.84□□□□□ -0.67
Sf3b3-201ENSMUST00000042012 Pdzd9Q9D9M4 266 aa10.84□□□□□ -0.67
Sf3b3-201ENSMUST00000042012 Kdm6bQ5NCY0 1641 aa10.84□□□□□ -0.67
Sf3b3-201ENSMUST00000042012 Ipo7Q9EPL8 1038 aaKnown RBP10.84□□□□□ -0.67
Sf3b3-201ENSMUST00000042012 Cdkl5Q3UTQ8 938 aa10.84□□□□□ -0.67
Sf3b3-201ENSMUST00000042012 RgmbQ7TQ33 436 aa10.84□□□□□ -0.67
Sf3b3-201ENSMUST00000042012 Plekhg1F6S200 1446 aa10.84□□□□□ -0.67
Sf3b3-201ENSMUST00000042012 Gcc2Q8CHG3 1679 aa10.84□□□□□ -0.67
Sf3b3-201ENSMUST00000042012 Tpm1P58771 284 aa10.83□□□□□ -0.68
Sf3b3-201ENSMUST00000042012 Tmem266Q8BZB3 538 aa10.83□□□□□ -0.68
Sf3b3-201ENSMUST00000042012 Atxn3Q9CVD2 355 aa10.83□□□□□ -0.68
Sf3b3-201ENSMUST00000042012 Large2Q5XPT3 690 aa10.83□□□□□ -0.68
Sf3b3-201ENSMUST00000042012 Slc35g1Q8BY79 368 aa10.83□□□□□ -0.68
Sf3b3-201ENSMUST00000042012 Bicd2Q921C5 820 aa10.83□□□□□ -0.68
Sf3b3-201ENSMUST00000042012 Nphp4P59240 1425 aa10.83□□□□□ -0.68
Sf3b3-201ENSMUST00000042012 Clasp1Q80TV8 1535 aaKnown RBP10.83□□□□□ -0.68
Sf3b3-201ENSMUST00000042012 Vps33bP59016 617 aa10.83□□□□□ -0.68
Sf3b3-201ENSMUST00000042012 Aplp1Q03157 653 aa10.83□□□□□ -0.68
Sf3b3-201ENSMUST00000042012 Podxl2Q8CAE9 603 aa10.83□□□□□ -0.68
Sf3b3-201ENSMUST00000042012 Nckap5lQ6GQX2 1323 aa10.83□□□□□ -0.68
Sf3b3-201ENSMUST00000042012 Dhx8A2A4P0 1244 aaKnown RBP10.83□□□□□ -0.68
Sf3b3-201ENSMUST00000042012 Casp1P29452 402 aa10.83□□□□□ -0.68
Sf3b3-201ENSMUST00000042012 Atp1b3P97370 278 aa10.83□□□□□ -0.68
Sf3b3-201ENSMUST00000042012 Irgm2A0A140LIF8 407 aa10.82□□□□□ -0.68
Sf3b3-201ENSMUST00000042012 Fam83gQ5SWY7 812 aa10.82□□□□□ -0.68
Sf3b3-201ENSMUST00000042012 Sf3a1Q8K4Z5 791 aaKnown RBP10.82□□□□□ -0.68
Sf3b3-201ENSMUST00000042012 Krt25Q8VCW2 446 aa10.82□□□□□ -0.68
Sf3b3-201ENSMUST00000042012 Abcc3B2RX12 1523 aa10.82□□□□□ -0.68
Sf3b3-201ENSMUST00000042012 Ptpdc1Q6NZK8 747 aa10.82□□□□□ -0.68
Sf3b3-201ENSMUST00000042012 PrimpolQ6P1E7 537 aa10.82□□□□□ -0.68
Sf3b3-201ENSMUST00000042012 Rnaseh2aQ9CWY8 301 aa10.82□□□□□ -0.68
Sf3b3-201ENSMUST00000042012 Cyp26c1B2RXA7 518 aa10.81□□□□□ -0.68
Sf3b3-201ENSMUST00000042012 Casq1O09165 405 aa10.81□□□□□ -0.68
Sf3b3-201ENSMUST00000042012 Brf1Q8CFK2 676 aa10.81□□□□□ -0.68
Sf3b3-201ENSMUST00000042012 Ccdc96Q9CR92 584 aa10.81□□□□□ -0.68
Sf3b3-201ENSMUST00000042012 Irs4Q9Z0Y7 1216 aa10.81□□□□□ -0.68
Sf3b3-201ENSMUST00000042012 Nphp3Q7TNH6 1325 aa10.81□□□□□ -0.68
Sf3b3-201ENSMUST00000042012 PtprmP28828 1452 aa10.81□□□□□ -0.68
Sf3b3-201ENSMUST00000042012 Myom2Q14BI5 1463 aa10.81□□□□□ -0.68
Sf3b3-201ENSMUST00000042012 Q3UPC7 1272 aa10.81□□□□□ -0.68
Sf3b3-201ENSMUST00000042012 Nos1Q9Z0J4 1429 aa10.81□□□□□ -0.68
Sf3b3-201ENSMUST00000042012 Prim1P20664 417 aa10.81□□□□□ -0.68
Sf3b3-201ENSMUST00000042012 Tpm3P21107 285 aaKnown RBP10.81□□□□□ -0.68
Sf3b3-201ENSMUST00000042012 Cd248Q91V98 765 aa10.81□□□□□ -0.68
Sf3b3-201ENSMUST00000042012 Prkag2Q91WG5 566 aa10.81□□□□□ -0.68
Sf3b3-201ENSMUST00000042012 Zbtb3Q91X45 518 aa10.81□□□□□ -0.68
Sf3b3-201ENSMUST00000042012 Kif20aP97329 887 aa10.81□□□□□ -0.68
Sf3b3-201ENSMUST00000042012 Chmp4cQ9D7F7 232 aa10.81□□□□□ -0.68
Sf3b3-201ENSMUST00000042012 A0A1W2P7S8 802 aa10.8□□□□□ -0.68
Sf3b3-201ENSMUST00000042012 Rsph3aQ3UFY4 516 aa10.8□□□□□ -0.68
Sf3b3-201ENSMUST00000042012 Cdc5lQ6A068 802 aaKnown RBP10.8□□□□□ -0.68
Retrieved 100 of 22,080 RNA–protein pairs in 15 ms