RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 LyarQ08288 388 aaKnown RBP19.09■□□□□ 0.65
Ccdc88a-201ENSMUST00000040182 Mtmr3Q8K296 1196 aa19.09■□□□□ 0.65
Ccdc88a-201ENSMUST00000040182 Ell2Q3UKU1 639 aa19.09■□□□□ 0.65
Ccdc88a-201ENSMUST00000040182 Gas2l3Q3UWW6 683 aa19.09■□□□□ 0.65
Ccdc88a-201ENSMUST00000040182 Rab3il1Q8VDV3 383 aa19.09■□□□□ 0.65
Ccdc88a-201ENSMUST00000040182 Krt7Q9DCV7 457 aa19.09■□□□□ 0.65
Ccdc88a-201ENSMUST00000040182 Kdm2bQ6P1G2 1309 aa19.09■□□□□ 0.65
Ccdc88a-201ENSMUST00000040182 Ankrd26Q811D2 1581 aa19.09■□□□□ 0.65
Ccdc88a-201ENSMUST00000040182 GmnnO88513 206 aa19.08■□□□□ 0.65
Ccdc88a-201ENSMUST00000040182 Gjb2Q00977 226 aa19.08■□□□□ 0.65
Ccdc88a-201ENSMUST00000040182 Grin2bQ01097 1482 aa19.08■□□□□ 0.65
Ccdc88a-201ENSMUST00000040182 Zfp853A0A1D5RM95 733 aa19.08■□□□□ 0.65
Ccdc88a-201ENSMUST00000040182 Nlrp3Q8R4B8 1033 aa19.08■□□□□ 0.65
Ccdc88a-201ENSMUST00000040182 Mcm4P49717 862 aa19.08■□□□□ 0.65
Ccdc88a-201ENSMUST00000040182 E9QMW4 1145 aa19.08■□□□□ 0.64
Ccdc88a-201ENSMUST00000040182 Tbc1d2bQ3U0J8 965 aa19.08■□□□□ 0.64
Ccdc88a-201ENSMUST00000040182 Ccdc170D3YXL0 722 aa19.08■□□□□ 0.64
Ccdc88a-201ENSMUST00000040182 Ttc5Q99LG4 440 aa19.08■□□□□ 0.64
Ccdc88a-201ENSMUST00000040182 Speer4bQ9D9F7 267 aa19.08■□□□□ 0.64
Ccdc88a-201ENSMUST00000040182 Zkscan7E9PVW1 718 aa19.07■□□□□ 0.64
Ccdc88a-201ENSMUST00000040182 Cdk19Q8BWD8 501 aa19.07■□□□□ 0.64
Ccdc88a-201ENSMUST00000040182 Camsap2Q8C1B1 1461 aa19.07■□□□□ 0.64
Ccdc88a-201ENSMUST00000040182 Bcl11bQ99PV8 884 aa19.07■□□□□ 0.64
Ccdc88a-201ENSMUST00000040182 Usp37Q8C0R0 979 aa19.07■□□□□ 0.64
Ccdc88a-201ENSMUST00000040182 Cacna2d4Q5RJF7 1116 aa19.07■□□□□ 0.64
Ccdc88a-201ENSMUST00000040182 Fmnl3Q6ZPF4 1028 aa19.07■□□□□ 0.64
Ccdc88a-201ENSMUST00000040182 Cep135Q6P5D4 1140 aa19.06■□□□□ 0.64
Ccdc88a-201ENSMUST00000040182 HnrnpmQ9D0E1 729 aaKnown RBP19.06■□□□□ 0.64
Ccdc88a-201ENSMUST00000040182 Sept7O55131 436 aa19.06■□□□□ 0.64
Ccdc88a-201ENSMUST00000040182 Fermt2Q8CIB5 680 aa19.06■□□□□ 0.64
Ccdc88a-201ENSMUST00000040182 Sil1Q9EPK6 465 aa19.06■□□□□ 0.64
Ccdc88a-201ENSMUST00000040182 Mex3cQ05A36 652 aaKnown RBP19.06■□□□□ 0.64
Ccdc88a-201ENSMUST00000040182 L1td1Q587J6 782 aaKnown RBP19.06■□□□□ 0.64
Ccdc88a-201ENSMUST00000040182 Sh2d4bA6X942 431 aa19.06■□□□□ 0.64
Ccdc88a-201ENSMUST00000040182 AcrbpQ3V140 540 aa19.06■□□□□ 0.64
Ccdc88a-201ENSMUST00000040182 Ttc12Q8BW49 704 aa19.06■□□□□ 0.64
Ccdc88a-201ENSMUST00000040182 Hs2st1Q8R3H7 356 aa19.06■□□□□ 0.64
Ccdc88a-201ENSMUST00000040182 Pip4k2bQ80XI4 416 aa19.05■□□□□ 0.64
Ccdc88a-201ENSMUST00000040182 Kif2aP28740 705 aa19.05■□□□□ 0.64
Ccdc88a-201ENSMUST00000040182 Q7TT23 1179 aa19.05■□□□□ 0.64
Ccdc88a-201ENSMUST00000040182 Cnga2Q62398 664 aa19.05■□□□□ 0.64
Ccdc88a-201ENSMUST00000040182 RalylQ8BTF8 293 aa19.05■□□□□ 0.64
Ccdc88a-201ENSMUST00000040182 Wdhd1P59328 1117 aa19.05■□□□□ 0.64
Ccdc88a-201ENSMUST00000040182 Traf3ip1Q149C2 625 aa19.05■□□□□ 0.64
Ccdc88a-201ENSMUST00000040182 Ccdc178Q8CDV0 866 aa19.05■□□□□ 0.64
Ccdc88a-201ENSMUST00000040182 Ctnnbl1Q9CWL8 563 aaKnown RBP19.05■□□□□ 0.64
Ccdc88a-201ENSMUST00000040182 TimelessQ9R1X4 1197 aa19.05■□□□□ 0.64
Ccdc88a-201ENSMUST00000040182 Gm21663A0A0G2JE01 267 aa19.05■□□□□ 0.64
Ccdc88a-201ENSMUST00000040182 5031410I06RikE9Q4E0 267 aa19.05■□□□□ 0.64
Ccdc88a-201ENSMUST00000040182 Gm5862K7N5V5 267 aa19.05■□□□□ 0.64
Ccdc88a-201ENSMUST00000040182 Gm10220K7N660 267 aa19.05■□□□□ 0.64
Ccdc88a-201ENSMUST00000040182 Adcy5P84309 1262 aa19.05■□□□□ 0.64
Ccdc88a-201ENSMUST00000040182 Exoc6bA6H5Z3 810 aa19.04■□□□□ 0.64
Ccdc88a-201ENSMUST00000040182 Cdr1E9Q0B4 517 aa19.04■□□□□ 0.64
Ccdc88a-201ENSMUST00000040182 Spg7Q3ULF4 781 aa19.04■□□□□ 0.64
Ccdc88a-201ENSMUST00000040182 Tmem87bQ8BKU8 555 aa19.04■□□□□ 0.64
Ccdc88a-201ENSMUST00000040182 Atf7Q8R0S1 413 aa19.04■□□□□ 0.64
Ccdc88a-201ENSMUST00000040182 Maco1Q7TQE6 664 aaKnown RBP19.04■□□□□ 0.64
Ccdc88a-201ENSMUST00000040182 Nup133Q8R0G9 1155 aa19.04■□□□□ 0.64
Ccdc88a-201ENSMUST00000040182 Bloc1s2Q9CWG9 143 aa19.04■□□□□ 0.64
Ccdc88a-201ENSMUST00000040182 Urb2E9Q7L1 1524 aaKnown RBP19.04■□□□□ 0.64
Ccdc88a-201ENSMUST00000040182 Mrpl44Q9CY73 333 aaKnown RBP19.04■□□□□ 0.64
Ccdc88a-201ENSMUST00000040182 Bag4Q8CI61 457 aa19.04■□□□□ 0.64
Ccdc88a-201ENSMUST00000040182 Cbx1P83917 185 aaKnown RBP19.04■□□□□ 0.64
Ccdc88a-201ENSMUST00000040182 Kcnh5Q920E3 988 aa19.04■□□□□ 0.64
Ccdc88a-201ENSMUST00000040182 CactinQ9CS00 772 aaKnown RBP19.04■□□□□ 0.64
Ccdc88a-201ENSMUST00000040182 SynmQ70IV5 1561 aa19.04■□□□□ 0.64
Ccdc88a-201ENSMUST00000040182 Stx6Q9JKK1 255 aa19.03■□□□□ 0.64
Ccdc88a-201ENSMUST00000040182 Cfap157Q0VFX2 523 aa19.03■□□□□ 0.64
Ccdc88a-201ENSMUST00000040182 PalmQ9Z0P4 383 aa19.03■□□□□ 0.64
Ccdc88a-201ENSMUST00000040182 Pde1cQ64338 706 aa19.03■□□□□ 0.64
Ccdc88a-201ENSMUST00000040182 Apol7cQ8C6E1 369 aa19.03■□□□□ 0.64
Ccdc88a-201ENSMUST00000040182 DmtnQ9WV69 405 aa19.03■□□□□ 0.64
Ccdc88a-201ENSMUST00000040182 Slc26a8Q8R0C3 999 aa19.03■□□□□ 0.64
Ccdc88a-201ENSMUST00000040182 Camsap1A2AHC3 1581 aa19.03■□□□□ 0.64
Ccdc88a-201ENSMUST00000040182 Nfxl1E9Q8I7 918 aaKnown RBP19.03■□□□□ 0.64
Ccdc88a-201ENSMUST00000040182 Cfap100Q80VN0 613 aa19.03■□□□□ 0.64
Ccdc88a-201ENSMUST00000040182 Zmym3Q9JLM4 1370 aa19.02■□□□□ 0.64
Ccdc88a-201ENSMUST00000040182 Gas8Q60779 478 aa19.02■□□□□ 0.64
Ccdc88a-201ENSMUST00000040182 4931400O07RikQ9D4M5 137 aa19.02■□□□□ 0.64
Ccdc88a-201ENSMUST00000040182 Tagap1P0CAX8 505 aa19.02■□□□□ 0.64
Ccdc88a-201ENSMUST00000040182 Fgfr1opQ66JX5 399 aa19.02■□□□□ 0.64
Ccdc88a-201ENSMUST00000040182 Gramd4Q8CB44 633 aa19.02■□□□□ 0.64
Ccdc88a-201ENSMUST00000040182 Ttc21aQ8C0S4 1314 aa19.02■□□□□ 0.64
Ccdc88a-201ENSMUST00000040182 Ankib1Q6ZPS6 1085 aa19.02■□□□□ 0.64
Ccdc88a-201ENSMUST00000040182 Setdb1O88974 1307 aa19.02■□□□□ 0.64
Ccdc88a-201ENSMUST00000040182 Ano10Q8BH79 659 aa19.01■□□□□ 0.63
Ccdc88a-201ENSMUST00000040182 Znf131Q8K3J5 619 aa19.01■□□□□ 0.63
Ccdc88a-201ENSMUST00000040182 Mical3Q8CJ19 1993 aa19.01■□□□□ 0.63
Ccdc88a-201ENSMUST00000040182 Ppp1r15aP17564 657 aa19.01■□□□□ 0.63
Ccdc88a-201ENSMUST00000040182 Tex35Q14BK3 207 aa19.01■□□□□ 0.63
Ccdc88a-201ENSMUST00000040182 Kif21bQ9QXL1 1668 aa19.01■□□□□ 0.63
Ccdc88a-201ENSMUST00000040182 Taok3Q8BYC6 898 aa19.01■□□□□ 0.63
Ccdc88a-201ENSMUST00000040182 Uso1Q9Z1Z0 959 aaKnown RBP19.01■□□□□ 0.63
Ccdc88a-201ENSMUST00000040182 Aimp1P31230 310 aaKnown RBP19.01■□□□□ 0.63
Ccdc88a-201ENSMUST00000040182 Tfip11Q9ERA6 838 aaKnown RBP19.01■□□□□ 0.63
Ccdc88a-201ENSMUST00000040182 Phlpp2Q8BXA7 1320 aa19■□□□□ 0.63
Ccdc88a-201ENSMUST00000040182 Cers3Q1A3B0 383 aa19■□□□□ 0.63
Ccdc88a-201ENSMUST00000040182 Tmem67Q8BR76 992 aa19■□□□□ 0.63
Ccdc88a-201ENSMUST00000040182 Smc5Q8CG46 1101 aaKnown RBP19■□□□□ 0.63
Retrieved 100 of 22,080 RNA–protein pairs in 13 ms