RNA–Protein interactions for RNA: ENSMUST00000033898.9

Col4a1-201, Transcript of Collagen alpha-1(IV) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col4a1, Length 6,615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1-201ENSMUST00000033898 Slc14a2Q8R4T9 930 aa16.57■□□□□ 0.24
Col4a1-201ENSMUST00000033898 Vps16Q920Q4 839 aa16.56■□□□□ 0.24
Col4a1-201ENSMUST00000033898 Znf287Q9EQB9 759 aa16.56■□□□□ 0.24
Col4a1-201ENSMUST00000033898 Ifit1bl2Q3U687 466 aa16.56■□□□□ 0.24
Col4a1-201ENSMUST00000033898 Cyp7a1Q64505 503 aa16.56■□□□□ 0.24
Col4a1-201ENSMUST00000033898 Soga3Q6NZL0 945 aa16.56■□□□□ 0.24
Col4a1-201ENSMUST00000033898 Cnga2Q62398 664 aa16.56■□□□□ 0.24
Col4a1-201ENSMUST00000033898 StambpQ9CQ26 424 aa16.56■□□□□ 0.24
Col4a1-201ENSMUST00000033898 Arhgap31A6X8Z5 1425 aa16.56■□□□□ 0.24
Col4a1-201ENSMUST00000033898 Chmp6P0C0A3 200 aa16.56■□□□□ 0.24
Col4a1-201ENSMUST00000033898 Fchsd2Q3USJ8 740 aa16.56■□□□□ 0.24
Col4a1-201ENSMUST00000033898 Prkar2bP31324 416 aa16.55■□□□□ 0.24
Col4a1-201ENSMUST00000033898 Slc4a8Q8JZR6 1089 aa16.55■□□□□ 0.24
Col4a1-201ENSMUST00000033898 Prpf40aQ9R1C7 953 aaKnown RBP16.55■□□□□ 0.24
Col4a1-201ENSMUST00000033898 Stx8O88983 236 aa16.55■□□□□ 0.24
Col4a1-201ENSMUST00000033898 Smarcad1Q04692 1021 aa16.55■□□□□ 0.24
Col4a1-201ENSMUST00000033898 Traf3ip1Q149C2 625 aa16.55■□□□□ 0.24
Col4a1-201ENSMUST00000033898 Ccdc66Q6NS45 935 aa16.55■□□□□ 0.24
Col4a1-201ENSMUST00000033898 Slf2Q6P9P0 1278 aa16.55■□□□□ 0.24
Col4a1-201ENSMUST00000033898 RarsQ9D0I9 660 aaKnown RBP16.55■□□□□ 0.24
Col4a1-201ENSMUST00000033898 Triml1Q8BVP1 470 aa16.55■□□□□ 0.24
Col4a1-201ENSMUST00000033898 Bag4Q8CI61 457 aa16.55■□□□□ 0.24
Col4a1-201ENSMUST00000033898 Fam184aE9PW83 1143 aa16.55■□□□□ 0.24
Col4a1-201ENSMUST00000033898 Als2cr12Q8BVM7 383 aa16.55■□□□□ 0.24
Col4a1-201ENSMUST00000033898 Gle1Q8R322 699 aa16.55■□□□□ 0.24
Col4a1-201ENSMUST00000033898 Vps8Q0P5W1 1427 aa16.54■□□□□ 0.24
Col4a1-201ENSMUST00000033898 Sept7O55131 436 aa16.54■□□□□ 0.24
Col4a1-201ENSMUST00000033898 Ankrd40Q5SUE8 363 aa16.54■□□□□ 0.24
Col4a1-201ENSMUST00000033898 Gm10563F6WIE4 79 aa16.54■□□□□ 0.24
Col4a1-201ENSMUST00000033898 Smtnl1Q99LM3 459 aa16.54■□□□□ 0.24
Col4a1-201ENSMUST00000033898 Hspa4Q61316 841 aa16.54■□□□□ 0.24
Col4a1-201ENSMUST00000033898 Iffo1Q8BXL9 562 aa16.54■□□□□ 0.24
Col4a1-201ENSMUST00000033898 Vps37cQ8R105 352 aa16.54■□□□□ 0.24
Col4a1-201ENSMUST00000033898 Nphp3Q7TNH6 1325 aa16.54■□□□□ 0.24
Col4a1-201ENSMUST00000033898 Urb2E9Q7L1 1524 aaKnown RBP16.54■□□□□ 0.24
Col4a1-201ENSMUST00000033898 Capn12Q9ER56 720 aa16.54■□□□□ 0.24
Col4a1-201ENSMUST00000033898 Ppp1r21Q3TDD9 780 aa16.54■□□□□ 0.24
Col4a1-201ENSMUST00000033898 Q3UJC8 639 aa16.54■□□□□ 0.24
Col4a1-201ENSMUST00000033898 Dnaaf4Q8R368 420 aa16.54■□□□□ 0.24
Col4a1-201ENSMUST00000033898 Slc5a4bQ91ZP4 660 aa16.54■□□□□ 0.24
Col4a1-201ENSMUST00000033898 IbtkQ6ZPR6 1352 aaKnown RBP16.53■□□□□ 0.24
Col4a1-201ENSMUST00000033898 Bbof1Q3V079 533 aa16.53■□□□□ 0.24
Col4a1-201ENSMUST00000033898 Map3k2Q61083 619 aa16.53■□□□□ 0.24
Col4a1-201ENSMUST00000033898 Smarca4Q3TKT4 1613 aaKnown RBP16.53■□□□□ 0.24
Col4a1-201ENSMUST00000033898 Igflr1Q3U4N7 345 aa16.53■□□□□ 0.24
Col4a1-201ENSMUST00000033898 Ano8Q6PB70 1060 aa16.53■□□□□ 0.24
Col4a1-201ENSMUST00000033898 Spocd1B1ASB6 936 aa16.53■□□□□ 0.24
Col4a1-201ENSMUST00000033898 Hdhd2Q3UGR5 259 aa16.53■□□□□ 0.24
Col4a1-201ENSMUST00000033898 Ptcd1Q8C2E4 695 aaKnown RBP16.53■□□□□ 0.24
Col4a1-201ENSMUST00000033898 Epb41l3Q9WV92 929 aa16.53■□□□□ 0.24
Col4a1-201ENSMUST00000033898 Plekhg2Q6KAU7 1340 aa16.52■□□□□ 0.24
Col4a1-201ENSMUST00000033898 Tbc1d2bQ3U0J8 965 aa16.52■□□□□ 0.24
Col4a1-201ENSMUST00000033898 Jmjd4Q8BFT6 427 aa16.52■□□□□ 0.24
Col4a1-201ENSMUST00000033898 Ccdc150Q8CDI7 1110 aa16.52■□□□□ 0.24
Col4a1-201ENSMUST00000033898 Cfap53Q9D439 514 aa16.52■□□□□ 0.24
Col4a1-201ENSMUST00000033898 Ces1aE9PYP1 563 aa16.52■□□□□ 0.24
Col4a1-201ENSMUST00000033898 Epb41l2O70318 988 aaKnown RBP16.52■□□□□ 0.24
Col4a1-201ENSMUST00000033898 Ctr9Q62018 1173 aaKnown RBP16.52■□□□□ 0.24
Col4a1-201ENSMUST00000033898 Myd88P22366 296 aa16.52■□□□□ 0.23
Col4a1-201ENSMUST00000033898 Spg7Q3ULF4 781 aa16.52■□□□□ 0.23
Col4a1-201ENSMUST00000033898 Usp5P56399 858 aaKnown RBP16.52■□□□□ 0.23
Col4a1-201ENSMUST00000033898 GphnQ8BUV3 769 aaKnown RBP16.52■□□□□ 0.23
Col4a1-201ENSMUST00000033898 Terf1P70371 421 aa16.51■□□□□ 0.23
Col4a1-201ENSMUST00000033898 Ncf1Q09014 390 aa16.51■□□□□ 0.23
Col4a1-201ENSMUST00000033898 Polr1aO35134 1717 aaKnown RBP16.51■□□□□ 0.23
Col4a1-201ENSMUST00000033898 Vps41Q5KU39 853 aa16.51■□□□□ 0.23
Col4a1-201ENSMUST00000033898 Rbm27Q5SFM8 1060 aaKnown RBP16.51■□□□□ 0.23
Col4a1-201ENSMUST00000033898 Rcan3Q9JKK0 239 aa16.51■□□□□ 0.23
Col4a1-201ENSMUST00000033898 Ift74Q8BKE9 600 aa16.51■□□□□ 0.23
Col4a1-201ENSMUST00000033898 Irf9Q61179 399 aa16.5■□□□□ 0.23
Col4a1-201ENSMUST00000033898 Ccdc93Q7TQK5 629 aa16.5■□□□□ 0.23
Col4a1-201ENSMUST00000033898 Erlin1Q91X78 346 aa16.5■□□□□ 0.23
Col4a1-201ENSMUST00000033898 Aldh1l1Q8R0Y6 902 aa16.5■□□□□ 0.23
Col4a1-201ENSMUST00000033898 Kifc2O08672 792 aa16.5■□□□□ 0.23
Col4a1-201ENSMUST00000033898 Snx25Q3ZT31 840 aa16.5■□□□□ 0.23
Col4a1-201ENSMUST00000033898 Kiaa1211Q5PR69 1207 aa16.5■□□□□ 0.23
Col4a1-201ENSMUST00000033898 Ccdc73Q8CDM4 1066 aa16.5■□□□□ 0.23
Col4a1-201ENSMUST00000033898 IqcgQ80W32 419 aa16.5■□□□□ 0.23
Col4a1-201ENSMUST00000033898 Smc1bQ920F6 1248 aa16.5■□□□□ 0.23
Col4a1-201ENSMUST00000033898 Limch1Q3UH68 1057 aa16.5■□□□□ 0.23
Col4a1-201ENSMUST00000033898 Kcnh5Q920E3 988 aa16.49■□□□□ 0.23
Col4a1-201ENSMUST00000033898 Sil1Q9EPK6 465 aa16.49■□□□□ 0.23
Col4a1-201ENSMUST00000033898 Api5O35841 504 aaKnown RBP16.49■□□□□ 0.23
Col4a1-201ENSMUST00000033898 Skida1Q80YR3 822 aa16.49■□□□□ 0.23
Col4a1-201ENSMUST00000033898 Cyp4f39Q8BGU0 532 aa16.49■□□□□ 0.23
Col4a1-201ENSMUST00000033898 Tmco5aQ9D9D5 303 aa16.49■□□□□ 0.23
Col4a1-201ENSMUST00000033898 Ssrp1Q08943 708 aaKnown RBP16.49■□□□□ 0.23
Col4a1-201ENSMUST00000033898 Metap2O08663 478 aaKnown RBP16.48■□□□□ 0.23
Col4a1-201ENSMUST00000033898 Rnf41Q8BH75 317 aa16.48■□□□□ 0.23
Col4a1-201ENSMUST00000033898 Ctage5Q8R311 779 aa16.48■□□□□ 0.23
Col4a1-201ENSMUST00000033898 Rab3il1Q8VDV3 383 aa16.48■□□□□ 0.23
Col4a1-201ENSMUST00000033898 Mum1Q6DID5 682 aa16.48■□□□□ 0.23
Col4a1-201ENSMUST00000033898 Mrps25Q9D125 171 aaKnown RBP16.48■□□□□ 0.23
Col4a1-201ENSMUST00000033898 Adcy5P84309 1262 aa16.48■□□□□ 0.23
Col4a1-201ENSMUST00000033898 Sept6Q9R1T4 434 aa16.48■□□□□ 0.23
Col4a1-201ENSMUST00000033898 Plekhm2Q80TQ5 1018 aa16.48■□□□□ 0.23
Col4a1-201ENSMUST00000033898 Calml4Q91WQ9 153 aa16.47■□□□□ 0.23
Col4a1-201ENSMUST00000033898 Baiap2l1Q9DBJ3 514 aa16.47■□□□□ 0.23
Col4a1-201ENSMUST00000033898 ParvgQ9ERD8 331 aa16.47■□□□□ 0.23
Col4a1-201ENSMUST00000033898 Pdcd6ipQ9WU78 869 aaKnown RBP16.47■□□□□ 0.23
Retrieved 100 of 22,080 RNA–protein pairs in 12.2 ms