RNA–Protein interactions for RNA: ENSMUST00000029414.11

Ssr3-201, Transcript of Translocon-associated protein subunit gamma, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ssr3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr3-201ENSMUST00000029414 Prim1P20664 417 aa10.44□□□□□ -0.74
Ssr3-201ENSMUST00000029414 Rnaseh2aQ9CWY8 301 aa10.44□□□□□ -0.74
Ssr3-201ENSMUST00000029414 Rbm26Q6NZN0 1012 aaKnown RBP10.44□□□□□ -0.74
Ssr3-201ENSMUST00000029414 Trip6Q9Z1Y4 480 aa10.44□□□□□ -0.74
Ssr3-201ENSMUST00000029414 Cnnm1Q0GA42 951 aa10.44□□□□□ -0.74
Ssr3-201ENSMUST00000029414 Ggnbp2Q5SV77 696 aa10.44□□□□□ -0.74
Ssr3-201ENSMUST00000029414 Exoc6Q8R313 802 aa10.44□□□□□ -0.74
Ssr3-201ENSMUST00000029414 Ankrd31A0A140LI88 1765 aa10.43□□□□□ -0.74
Ssr3-201ENSMUST00000029414 Prr29B1ARI9 187 aa10.43□□□□□ -0.74
Ssr3-201ENSMUST00000029414 Wdhd1P59328 1117 aa10.43□□□□□ -0.74
Ssr3-201ENSMUST00000029414 Cyp2c67Q569X9 491 aa10.43□□□□□ -0.74
Ssr3-201ENSMUST00000029414 Wwc2Q6NXJ0 1187 aa10.43□□□□□ -0.74
Ssr3-201ENSMUST00000029414 Golga2Q921M4 999 aa10.43□□□□□ -0.74
Ssr3-201ENSMUST00000029414 Gigyf1Q99MR1 1044 aaKnown RBP10.43□□□□□ -0.74
Ssr3-201ENSMUST00000029414 Taf1dQ9D4V4 322 aa10.43□□□□□ -0.74
Ssr3-201ENSMUST00000029414 Swt1Q9DBQ9 907 aa10.43□□□□□ -0.74
Ssr3-201ENSMUST00000029414 Rapgef4Q9EQZ6 1011 aa10.43□□□□□ -0.74
Ssr3-201ENSMUST00000029414 Megf6Q80V70 1572 aa10.43□□□□□ -0.74
Ssr3-201ENSMUST00000029414 Eif4a1P60843 406 aaKnown RBP10.42□□□□□ -0.74
Ssr3-201ENSMUST00000029414 Nsfl1cQ9CZ44 370 aaKnown RBP10.42□□□□□ -0.74
Ssr3-201ENSMUST00000029414 Pdia6Q922R8 440 aaKnown RBP10.42□□□□□ -0.74
Ssr3-201ENSMUST00000029414 Ambra1A2AH22 1300 aa10.42□□□□□ -0.74
Ssr3-201ENSMUST00000029414 Prr5lA2AVJ5 370 aa10.41□□□□□ -0.74
Ssr3-201ENSMUST00000029414 Gpr162Q3UN16 588 aa10.41□□□□□ -0.74
Ssr3-201ENSMUST00000029414 Mtcl1Q3UHU5 1945 aa10.41□□□□□ -0.74
Ssr3-201ENSMUST00000029414 Tktl2Q9D4D4 627 aa10.41□□□□□ -0.74
Ssr3-201ENSMUST00000029414 Mrc1Q61830 1456 aa10.41□□□□□ -0.74
Ssr3-201ENSMUST00000029414 Cyp2c69E9PXC3 491 aa10.41□□□□□ -0.74
Ssr3-201ENSMUST00000029414 Cyp2c40P56657 491 aa10.41□□□□□ -0.74
Ssr3-201ENSMUST00000029414 Arid3aQ62431 601 aa10.41□□□□□ -0.74
Ssr3-201ENSMUST00000029414 Prkab2Q6PAM0 271 aa10.41□□□□□ -0.74
Ssr3-201ENSMUST00000029414 SnrkQ8VDU5 748 aa10.41□□□□□ -0.74
Ssr3-201ENSMUST00000029414 Irx6Q9ER75 438 aa10.41□□□□□ -0.74
Ssr3-201ENSMUST00000029414 Strn4P58404 760 aa10.4□□□□□ -0.74
Ssr3-201ENSMUST00000029414 Foxp4Q9DBY0 795 aaKnown RBP10.4□□□□□ -0.74
Ssr3-201ENSMUST00000029414 Taf7Q9R1C0 341 aa10.4□□□□□ -0.74
Ssr3-201ENSMUST00000029414 CastP51125 788 aa10.4□□□□□ -0.75
Ssr3-201ENSMUST00000029414 Zscan21Q07231 555 aa10.4□□□□□ -0.75
Ssr3-201ENSMUST00000029414 Snai1Q02085 264 aa10.39□□□□□ -0.75
Ssr3-201ENSMUST00000029414 Dusp27Q148W8 1138 aa10.39□□□□□ -0.75
Ssr3-201ENSMUST00000029414 Tango6Q8C3S2 1079 aa10.39□□□□□ -0.75
Ssr3-201ENSMUST00000029414 GckrQ91X44 587 aa10.39□□□□□ -0.75
Ssr3-201ENSMUST00000029414 Duox1A2AQ92 1551 aa10.39□□□□□ -0.75
Ssr3-201ENSMUST00000029414 Arap2Q8BZ05 1703 aa10.39□□□□□ -0.75
Ssr3-201ENSMUST00000029414 Prdm11A2AGX3 565 aa10.39□□□□□ -0.75
Ssr3-201ENSMUST00000029414 Slurp2P0DP59 97 aa10.39□□□□□ -0.75
Ssr3-201ENSMUST00000029414 Esco1Q69Z69 843 aa10.39□□□□□ -0.75
Ssr3-201ENSMUST00000029414 IarsQ8BU30 1262 aa10.39□□□□□ -0.75
Ssr3-201ENSMUST00000029414 Cyp2d12Q8BVD2 504 aa10.39□□□□□ -0.75
Ssr3-201ENSMUST00000029414 FktnQ8R507 461 aa10.39□□□□□ -0.75
Ssr3-201ENSMUST00000029414 Col24a1Q30D77 1733 aa10.39□□□□□ -0.75
Ssr3-201ENSMUST00000029414 Zfp646Q6NV66 1788 aa10.39□□□□□ -0.75
Ssr3-201ENSMUST00000029414 Erbb4Q61527 1308 aa10.38□□□□□ -0.75
Ssr3-201ENSMUST00000029414 Esx1O88933 382 aa10.38□□□□□ -0.75
Ssr3-201ENSMUST00000029414 Yy1Q00899 414 aa10.38□□□□□ -0.75
Ssr3-201ENSMUST00000029414 Ssc5dQ8BV57 1371 aa10.38□□□□□ -0.75
Ssr3-201ENSMUST00000029414 Lmnb1P14733 588 aaKnown RBP10.37□□□□□ -0.75
Ssr3-201ENSMUST00000029414 SowahdQ8BY98 327 aa10.37□□□□□ -0.75
Ssr3-201ENSMUST00000029414 Klhdc4Q921I2 584 aa10.37□□□□□ -0.75
Ssr3-201ENSMUST00000029414 Uspl1Q3ULM6 1089 aa10.37□□□□□ -0.75
Ssr3-201ENSMUST00000029414 Slf2Q6P9P0 1278 aa10.37□□□□□ -0.75
Ssr3-201ENSMUST00000029414 Slc39a6Q8C145 765 aa10.37□□□□□ -0.75
Ssr3-201ENSMUST00000029414 Ank1Q02357 1862 aa10.36□□□□□ -0.75
Ssr3-201ENSMUST00000029414 Adgre1Q61549 931 aa10.36□□□□□ -0.75
Ssr3-201ENSMUST00000029414 Trim52Q8CDV4 233 aa10.36□□□□□ -0.75
Ssr3-201ENSMUST00000029414 Tmem119Q8R138 280 aa10.36□□□□□ -0.75
Ssr3-201ENSMUST00000029414 Bcl2l13P59017 434 aa10.36□□□□□ -0.75
Ssr3-201ENSMUST00000029414 ArsiQ32KI9 573 aa10.36□□□□□ -0.75
Ssr3-201ENSMUST00000029414 Nup188Q6ZQH8 1759 aa10.36□□□□□ -0.75
Ssr3-201ENSMUST00000029414 Col5a2Q3U962 1497 aa10.35□□□□□ -0.75
Ssr3-201ENSMUST00000029414 Tnnt1O88346 262 aa10.35□□□□□ -0.75
Ssr3-201ENSMUST00000029414 Nedd4P46935 887 aaKnown RBP10.35□□□□□ -0.75
Ssr3-201ENSMUST00000029414 Gtf3c3Q3TMP1 882 aa10.35□□□□□ -0.75
Ssr3-201ENSMUST00000029414 Chpf2Q3UU43 768 aa10.35□□□□□ -0.75
Ssr3-201ENSMUST00000029414 TrhQ62361 256 aa10.35□□□□□ -0.75
Ssr3-201ENSMUST00000029414 Fkbp4P30416 458 aa10.35□□□□□ -0.75
Ssr3-201ENSMUST00000029414 SympkQ80X82 1284 aa10.35□□□□□ -0.75
Ssr3-201ENSMUST00000029414 Ncbp3Q8BZR9 615 aaKnown RBP10.35□□□□□ -0.75
Ssr3-201ENSMUST00000029414 Spon1Q8VCC9 807 aa10.35□□□□□ -0.75
Ssr3-201ENSMUST00000029414 Plekhh1Q80TI1 1356 aa10.35□□□□□ -0.75
Ssr3-201ENSMUST00000029414 Pibf1E9Q6K3 756 aa10.35□□□□□ -0.75
Ssr3-201ENSMUST00000029414 EgfrQ01279 1210 aa10.35□□□□□ -0.75
Ssr3-201ENSMUST00000029414 Q8C6G1 249 aa10.34□□□□□ -0.75
Ssr3-201ENSMUST00000029414 Ciapin1Q8WTY4 309 aa10.34□□□□□ -0.75
Ssr3-201ENSMUST00000029414 Zfp831A2ADM8 1628 aa10.34□□□□□ -0.75
Ssr3-201ENSMUST00000029414 Morc2aQ69ZX6 1030 aa10.34□□□□□ -0.75
Ssr3-201ENSMUST00000029414 Pde3aQ9Z0X4 1141 aa10.34□□□□□ -0.75
Ssr3-201ENSMUST00000029414 NgdnQ9DB96 315 aaKnown RBP10.33□□□□□ -0.76
Ssr3-201ENSMUST00000029414 Slc34a2Q9DBP0 697 aa10.33□□□□□ -0.76
Ssr3-201ENSMUST00000029414 Gnai1B2RSH2 354 aa10.33□□□□□ -0.76
Ssr3-201ENSMUST00000029414 Stra8P70278 393 aa10.33□□□□□ -0.76
Ssr3-201ENSMUST00000029414 Gja5Q01231 358 aa10.33□□□□□ -0.76
Ssr3-201ENSMUST00000029414 Ifit1bl2Q3U687 466 aa10.33□□□□□ -0.76
Ssr3-201ENSMUST00000029414 Gnai3Q9DC51 354 aa10.33□□□□□ -0.76
Ssr3-201ENSMUST00000029414 Mical3Q8CJ19 1993 aa10.33□□□□□ -0.76
Ssr3-201ENSMUST00000029414 PsapQ61207 557 aaKnown RBP10.32□□□□□ -0.76
Ssr3-201ENSMUST00000029414 U2surpQ6NV83 1029 aaKnown RBP10.32□□□□□ -0.76
Ssr3-201ENSMUST00000029414 Nlrp3Q8R4B8 1033 aa10.32□□□□□ -0.76
Ssr3-201ENSMUST00000029414 Myh1Q5SX40 1942 aa10.32□□□□□ -0.76
Ssr3-201ENSMUST00000029414 B4galnt4Q766D5 1034 aa10.32□□□□□ -0.76
Retrieved 100 of 22,080 RNA–protein pairs in 10.9 ms