RNA–Protein interactions for RNA: ENSMUST00000025989.8

Tm9sf3-201, Transcript of Transmembrane 9 superfamily member 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Tm9sf3, Length 6,144 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tm9sf3-201ENSMUST00000025989 Lmbr1lQ9D1E5 489 aa23.49■■□□□ 1.35
Tm9sf3-201ENSMUST00000025989 Cul5Q9D5V5 780 aa23.48■■□□□ 1.35
Tm9sf3-201ENSMUST00000025989 GckrQ91X44 587 aa23.48■■□□□ 1.35
Tm9sf3-201ENSMUST00000025989 Ncf1Q09014 390 aa23.48■■□□□ 1.35
Tm9sf3-201ENSMUST00000025989 Eif4a2P10630 407 aa23.47■■□□□ 1.35
Tm9sf3-201ENSMUST00000025989 Taf7Q9R1C0 341 aa23.47■■□□□ 1.35
Tm9sf3-201ENSMUST00000025989 Samm50Q8BGH2 469 aa23.47■■□□□ 1.35
Tm9sf3-201ENSMUST00000025989 Zbtb3Q91X45 518 aa23.47■■□□□ 1.35
Tm9sf3-201ENSMUST00000025989 Cfap58B2RW38 873 aa23.47■■□□□ 1.35
Tm9sf3-201ENSMUST00000025989 Cct2P80314 535 aaKnown RBP23.47■■□□□ 1.35
Tm9sf3-201ENSMUST00000025989 Pik3c2gO70167 1506 aa23.47■■□□□ 1.35
Tm9sf3-201ENSMUST00000025989 ZwintQ9CQU5 252 aa23.46■■□□□ 1.35
Tm9sf3-201ENSMUST00000025989 Shroom2A2ALU4 1481 aa23.46■■□□□ 1.35
Tm9sf3-201ENSMUST00000025989 Stx8O88983 236 aa23.46■■□□□ 1.35
Tm9sf3-201ENSMUST00000025989 Traf3ip1Q149C2 625 aa23.45■■□□□ 1.35
Tm9sf3-201ENSMUST00000025989 Myo1bP46735 1107 aa23.45■■□□□ 1.34
Tm9sf3-201ENSMUST00000025989 Qtrt2B8ZXI1 415 aa23.45■■□□□ 1.34
Tm9sf3-201ENSMUST00000025989 Kif3cO35066 796 aa23.45■■□□□ 1.34
Tm9sf3-201ENSMUST00000025989 Cyp2ab1S4R196 498 aa23.45■■□□□ 1.34
Tm9sf3-201ENSMUST00000025989 Adck5Q80V03 582 aa23.45■■□□□ 1.34
Tm9sf3-201ENSMUST00000025989 Cdan1Q8CC12 1239 aa23.45■■□□□ 1.34
Tm9sf3-201ENSMUST00000025989 Samd9lQ69Z37 1561 aa23.45■■□□□ 1.34
Tm9sf3-201ENSMUST00000025989 Ano8Q6PB70 1060 aa23.44■■□□□ 1.34
Tm9sf3-201ENSMUST00000025989 Pla2r1Q62028 1487 aa23.44■■□□□ 1.34
Tm9sf3-201ENSMUST00000025989 Tmco3Q8BH01 678 aa23.44■■□□□ 1.34
Tm9sf3-201ENSMUST00000025989 Luc7lQ9CYI4 371 aaKnown RBP23.44■■□□□ 1.34
Tm9sf3-201ENSMUST00000025989 Naip5Q9R016 1403 aa23.44■■□□□ 1.34
Tm9sf3-201ENSMUST00000025989 Cers3Q1A3B0 383 aa23.44■■□□□ 1.34
Tm9sf3-201ENSMUST00000025989 Amotl1Q9D4H4 968 aa23.44■■□□□ 1.34
Tm9sf3-201ENSMUST00000025989 Dydc2Q9D3X8 139 aa23.43■■□□□ 1.34
Tm9sf3-201ENSMUST00000025989 Mctp2Q5RJH2 878 aa23.43■■□□□ 1.34
Tm9sf3-201ENSMUST00000025989 Tmem143Q8VD26 458 aa23.43■■□□□ 1.34
Tm9sf3-201ENSMUST00000025989 Lrrfip1Q3UZ39 729 aaKnown RBP23.43■■□□□ 1.34
Tm9sf3-201ENSMUST00000025989 Ddx46Q569Z5 1032 aaKnown RBP23.43■■□□□ 1.34
Tm9sf3-201ENSMUST00000025989 Bag1Q60739 355 aa23.43■■□□□ 1.34
Tm9sf3-201ENSMUST00000025989 Msl1Q6PDM1 616 aa23.42■■□□□ 1.34
Tm9sf3-201ENSMUST00000025989 Txnrd1Q9JMH6 613 aa23.42■■□□□ 1.34
Tm9sf3-201ENSMUST00000025989 Ncoa1P70365 1447 aa23.42■■□□□ 1.34
Tm9sf3-201ENSMUST00000025989 Ppfia3P60469 1194 aa23.42■■□□□ 1.34
Tm9sf3-201ENSMUST00000025989 Lamb3Q61087 1168 aa23.42■■□□□ 1.34
Tm9sf3-201ENSMUST00000025989 Dph6Q9CQ28 267 aa23.42■■□□□ 1.34
Tm9sf3-201ENSMUST00000025989 Cfap45Q9D9U9 551 aa23.42■■□□□ 1.34
Tm9sf3-201ENSMUST00000025989 Ankrd44B2RXR6 993 aa23.41■■□□□ 1.34
Tm9sf3-201ENSMUST00000025989 ThemisQ8BGW0 636 aa23.41■■□□□ 1.34
Tm9sf3-201ENSMUST00000025989 Nop14Q8R3N1 860 aaKnown RBP23.41■■□□□ 1.34
Tm9sf3-201ENSMUST00000025989 Taok2Q6ZQ29 1240 aa23.41■■□□□ 1.34
Tm9sf3-201ENSMUST00000025989 RtcbQ99LF4 505 aaKnown RBP23.41■■□□□ 1.34
Tm9sf3-201ENSMUST00000025989 Letm1Q9Z2I0 738 aa23.41■■□□□ 1.34
Tm9sf3-201ENSMUST00000025989 Cacna2d4Q5RJF7 1116 aa23.41■■□□□ 1.34
Tm9sf3-201ENSMUST00000025989 Rsph6aQ8CDR2 708 aa23.4■■□□□ 1.34
Tm9sf3-201ENSMUST00000025989 Trim11Q99PQ2 467 aa23.4■■□□□ 1.34
Tm9sf3-201ENSMUST00000025989 Kdm3aQ6PCM1 1323 aa23.4■■□□□ 1.34
Tm9sf3-201ENSMUST00000025989 Mns1Q61884 491 aa23.4■■□□□ 1.34
Tm9sf3-201ENSMUST00000025989 Fam170aQ66LM6 333 aa23.4■■□□□ 1.34
Tm9sf3-201ENSMUST00000025989 Slain2Q8CI08 581 aa23.4■■□□□ 1.34
Tm9sf3-201ENSMUST00000025989 Q9D5Q8 446 aa23.4■■□□□ 1.34
Tm9sf3-201ENSMUST00000025989 Rnf216P58283 853 aa23.4■■□□□ 1.34
Tm9sf3-201ENSMUST00000025989 Krt25Q8VCW2 446 aa23.4■■□□□ 1.34
Tm9sf3-201ENSMUST00000025989 Nphp3Q7TNH6 1325 aa23.4■■□□□ 1.34
Tm9sf3-201ENSMUST00000025989 Ptcd1Q8C2E4 695 aaKnown RBP23.4■■□□□ 1.34
Tm9sf3-201ENSMUST00000025989 Epb41l3Q9WV92 929 aa23.4■■□□□ 1.34
Tm9sf3-201ENSMUST00000025989 Matr3Q8K310 846 aaKnown RBP23.39■■□□□ 1.34
Tm9sf3-201ENSMUST00000025989 TrhQ62361 256 aa23.39■■□□□ 1.34
Tm9sf3-201ENSMUST00000025989 Rapgef3Q8VCC8 918 aa23.39■■□□□ 1.34
Tm9sf3-201ENSMUST00000025989 Pmfbp1Q9WVQ0 1022 aa23.39■■□□□ 1.34
Tm9sf3-201ENSMUST00000025989 Plekhg2Q6KAU7 1340 aa23.39■■□□□ 1.33
Tm9sf3-201ENSMUST00000025989 Sde2Q8K1J5 448 aaKnown RBP23.39■■□□□ 1.33
Tm9sf3-201ENSMUST00000025989 Ssh2Q5SW75 1423 aa23.39■■□□□ 1.33
Tm9sf3-201ENSMUST00000025989 Cadps2Q8BYR5 1297 aa23.39■■□□□ 1.33
Tm9sf3-201ENSMUST00000025989 Atp2b3Q0VF55 1220 aa23.39■■□□□ 1.33
Tm9sf3-201ENSMUST00000025989 Tshz3Q8CGV9 1081 aa23.39■■□□□ 1.33
Tm9sf3-201ENSMUST00000025989 Olr1Q9EQ09 363 aa23.39■■□□□ 1.33
Tm9sf3-201ENSMUST00000025989 Pnmal2G3X9N3 661 aa23.38■■□□□ 1.33
Tm9sf3-201ENSMUST00000025989 Rad23bP54728 416 aa23.38■■□□□ 1.33
Tm9sf3-201ENSMUST00000025989 Txndc16Q7TN22 820 aa23.38■■□□□ 1.33
Tm9sf3-201ENSMUST00000025989 Med4Q9CQA5 270 aa23.38■■□□□ 1.33
Tm9sf3-201ENSMUST00000025989 Usp5P56399 858 aaKnown RBP23.37■■□□□ 1.33
Tm9sf3-201ENSMUST00000025989 Secisbp2lQ6A098 1086 aaKnown RBP23.37■■□□□ 1.33
Tm9sf3-201ENSMUST00000025989 Ssh1Q76I79 1042 aa23.37■■□□□ 1.33
Tm9sf3-201ENSMUST00000025989 Prrc2bQ7TPM1 1486 aaKnown RBP23.37■■□□□ 1.33
Tm9sf3-201ENSMUST00000025989 Frat2Q8K025 231 aa23.37■■□□□ 1.33
Tm9sf3-201ENSMUST00000025989 Znf653Q6YND2 615 aa23.37■■□□□ 1.33
Tm9sf3-201ENSMUST00000025989 PaskQ8CEE6 1383 aa23.36■■□□□ 1.33
Tm9sf3-201ENSMUST00000025989 Grm8P47743 908 aa23.36■■□□□ 1.33
Tm9sf3-201ENSMUST00000025989 Homer1Q9Z2Y3 366 aa23.36■■□□□ 1.33
Tm9sf3-201ENSMUST00000025989 Cep112Q5PR68 954 aa23.36■■□□□ 1.33
Tm9sf3-201ENSMUST00000025989 Fam213aQ9CYH2 218 aa23.36■■□□□ 1.33
Tm9sf3-201ENSMUST00000025989 CenphQ9QYM8 241 aa23.36■■□□□ 1.33
Tm9sf3-201ENSMUST00000025989 IntuQ059U7 942 aa23.35■■□□□ 1.33
Tm9sf3-201ENSMUST00000025989 Tut1Q8R3F9 869 aa23.35■■□□□ 1.33
Tm9sf3-201ENSMUST00000025989 Hdac9Q99N13 588 aa23.35■■□□□ 1.33
Tm9sf3-201ENSMUST00000025989 Uspl1Q3ULM6 1089 aa23.35■■□□□ 1.33
Tm9sf3-201ENSMUST00000025989 Limch1Q3UH68 1057 aa23.35■■□□□ 1.33
Tm9sf3-201ENSMUST00000025989 Slc1a4O35874 532 aa23.35■■□□□ 1.33
Tm9sf3-201ENSMUST00000025989 Casp1P29452 402 aa23.35■■□□□ 1.33
Tm9sf3-201ENSMUST00000025989 Ginm1Q91WR6 327 aa23.35■■□□□ 1.33
Tm9sf3-201ENSMUST00000025989 Gnl2Q99LH1 728 aaKnown RBP23.35■■□□□ 1.33
Tm9sf3-201ENSMUST00000025989 Tmem266Q8BZB3 538 aa23.34■■□□□ 1.33
Tm9sf3-201ENSMUST00000025989 Pde3aQ9Z0X4 1141 aa23.34■■□□□ 1.33
Tm9sf3-201ENSMUST00000025989 Cdkn1cP49919 348 aa23.34■■□□□ 1.33
Retrieved 100 of 22,080 RNA–protein pairs in 16.7 ms