RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 CHIT1Q13231 466 aa13.1□□□□□ -0.31
PRKN-205ENST00000366897 CERS6Q6ZMG9 384 aa13.1□□□□□ -0.31
PRKN-205ENST00000366897 LGI4Q8N135 537 aa13.1□□□□□ -0.31
PRKN-205ENST00000366897 PIH1D2Q8WWB5 315 aa13.1□□□□□ -0.31
PRKN-205ENST00000366897 IL4I1Q96RQ9 567 aa13.1□□□□□ -0.31
PRKN-205ENST00000366897 YME1L1Q96TA2 773 aa13.1□□□□□ -0.31
PRKN-205ENST00000366897 ANKHQ9HCJ1 492 aa13.1□□□□□ -0.31
PRKN-205ENST00000366897 GLYATL1P3A0A0U1RQE8 302 aa13.09□□□□□ -0.31
PRKN-205ENST00000366897 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.09□□□□□ -0.31
PRKN-205ENST00000366897 GPX5O75715 221 aa13.09□□□□□ -0.31
PRKN-205ENST00000366897 FHP07954 510 aa13.09□□□□□ -0.31
PRKN-205ENST00000366897 HLA-EP13747 358 aa13.09□□□□□ -0.31
PRKN-205ENST00000366897 HNF1BP35680 557 aa13.09□□□□□ -0.31
PRKN-205ENST00000366897 FEN1P39748 380 aaKnown RBP13.09□□□□□ -0.31
PRKN-205ENST00000366897 BAK1Q16611 211 aa13.09□□□□□ -0.31
PRKN-205ENST00000366897 ZFP69Q49AA0 526 aa13.09□□□□□ -0.31
PRKN-205ENST00000366897 RTP2Q5QGT7 225 aa13.09□□□□□ -0.31
PRKN-205ENST00000366897 COX20Q5RI15 118 aa13.09□□□□□ -0.31
PRKN-205ENST00000366897 FRG2Q64ET8 278 aa13.09□□□□□ -0.31
PRKN-205ENST00000366897 KLHL17Q6TDP4 642 aa13.09□□□□□ -0.31
PRKN-205ENST00000366897 ELMOD1Q8N336 334 aa13.09□□□□□ -0.31
PRKN-205ENST00000366897 GPR151Q8TDV0 419 aa13.09□□□□□ -0.31
PRKN-205ENST00000366897 FRG2BQ96QU4 278 aa13.09□□□□□ -0.31
PRKN-205ENST00000366897 MGLLQ99685 303 aa13.09□□□□□ -0.31
PRKN-205ENST00000366897 TMEM246Q9BRR3 403 aa13.09□□□□□ -0.31
PRKN-205ENST00000366897 NXF2Q9GZY0 626 aaKnown RBP13.09□□□□□ -0.31
PRKN-205ENST00000366897 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.09□□□□□ -0.31
PRKN-205ENST00000366897 PAQR5Q9NXK6 330 aaPredicted RBP13.09□□□□□ -0.31
PRKN-205ENST00000366897 ACSL6Q9UKU0 697 aa13.09□□□□□ -0.31
PRKN-205ENST00000366897 PCDHGB3Q9Y5G1 929 aa13.09□□□□□ -0.31
PRKN-205ENST00000366897 PEX16Q9Y5Y5 336 aa13.09□□□□□ -0.31
PRKN-205ENST00000366897 CCDC88CQ9P219 2028 aa13.09□□□□□ -0.31
PRKN-205ENST00000366897 RANBP2P49792 3224 aaKnown RBP13.09□□□□□ -0.31
PRKN-205ENST00000366897 KCNE1BA0A087WTH5 132 aa13.09□□□□□ -0.31
PRKN-205ENST00000366897 PRAMEF25A6NGN4 478 aa13.09□□□□□ -0.31
PRKN-205ENST00000366897 SLC38A8A6NNN8 435 aa13.09□□□□□ -0.31
PRKN-205ENST00000366897 PCDH17O14917 1159 aa13.09□□□□□ -0.31
PRKN-205ENST00000366897 STC2O76061 302 aa13.09□□□□□ -0.31
PRKN-205ENST00000366897 SEMA3DO95025 777 aa13.09□□□□□ -0.31
PRKN-205ENST00000366897 CRATP43155 626 aa13.09□□□□□ -0.31
PRKN-205ENST00000366897 DSC1Q08554 894 aa13.09□□□□□ -0.31
PRKN-205ENST00000366897 HKDC1Q2TB90 917 aa13.09□□□□□ -0.31
PRKN-205ENST00000366897 UAP1L1Q3KQV9 507 aa13.09□□□□□ -0.31
PRKN-205ENST00000366897 FAM180BQ6P0A1 224 aa13.09□□□□□ -0.31
PRKN-205ENST00000366897 LAX1Q8IWV1 398 aa13.09□□□□□ -0.31
PRKN-205ENST00000366897 GPR26Q8NDV2 337 aa13.09□□□□□ -0.31
PRKN-205ENST00000366897 WDR36Q8NI36 951 aaKnown RBP13.09□□□□□ -0.31
PRKN-205ENST00000366897 TBC1D20Q96BZ9 403 aa13.09□□□□□ -0.31
PRKN-205ENST00000366897 CMTM7Q96FZ5 175 aa13.09□□□□□ -0.31
PRKN-205ENST00000366897 SPATA17Q96L03 361 aa13.09□□□□□ -0.31
PRKN-205ENST00000366897 CEP295NLQ96MC4 621 aa13.09□□□□□ -0.31
PRKN-205ENST00000366897 NECTIN4Q96NY8 510 aa13.09□□□□□ -0.31
PRKN-205ENST00000366897 COL21A1Q96P44 957 aa13.09□□□□□ -0.31
PRKN-205ENST00000366897 OR2A14Q96R47 310 aa13.09□□□□□ -0.31
PRKN-205ENST00000366897 GABARAPL3Q9BY60 117 aa13.09□□□□□ -0.31
PRKN-205ENST00000366897 SLC29A3Q9BZD2 475 aa13.09□□□□□ -0.31
PRKN-205ENST00000366897 TAS2R9Q9NYW1 312 aa13.09□□□□□ -0.31
PRKN-205ENST00000366897 VWA8A3KMH1 1905 aa13.09□□□□□ -0.31
PRKN-205ENST00000366897 A0A1B0GVM2 712 aa13.08□□□□□ -0.32
PRKN-205ENST00000366897 ARHGAP33O14559 1287 aa13.08□□□□□ -0.32
PRKN-205ENST00000366897 RGS13O14921 159 aa13.08□□□□□ -0.32
PRKN-205ENST00000366897 FZD6O60353 706 aa13.08□□□□□ -0.32
PRKN-205ENST00000366897 EIF2S1P05198 315 aaKnown RBP13.08□□□□□ -0.32
PRKN-205ENST00000366897 ETFAP13804 333 aa13.08□□□□□ -0.32
PRKN-205ENST00000366897 CD22P20273 847 aa13.08□□□□□ -0.32
PRKN-205ENST00000366897 CCND3P30281 292 aaPredicted RBP13.08□□□□□ -0.32
PRKN-205ENST00000366897 MAGEA11P43364 429 aa13.08□□□□□ -0.32
PRKN-205ENST00000366897 SMU1Q2TAY7 513 aa13.08□□□□□ -0.32
PRKN-205ENST00000366897 TBRG1Q3YBR2 411 aa13.08□□□□□ -0.32
PRKN-205ENST00000366897 TRIM60Q495X7 471 aa13.08□□□□□ -0.32
PRKN-205ENST00000366897 SERPINA13PQ6UXR4 307 aa13.08□□□□□ -0.32
PRKN-205ENST00000366897 TAS1R1Q7RTX1 841 aa13.08□□□□□ -0.32
PRKN-205ENST00000366897 CCDC190Q86UF4 302 aa13.08□□□□□ -0.32
PRKN-205ENST00000366897 TMEM173Q86WV6 379 aaPredicted RBP13.08□□□□□ -0.32
PRKN-205ENST00000366897 UBQLNLQ8IYU4 475 aa13.08□□□□□ -0.32
PRKN-205ENST00000366897 OR4K1Q8NGD4 311 aa13.08□□□□□ -0.32
PRKN-205ENST00000366897 DEPDC7Q96QD5 511 aa13.08□□□□□ -0.32
PRKN-205ENST00000366897 FYTTD1Q96QD9 318 aaKnown RBP13.08□□□□□ -0.32
PRKN-205ENST00000366897 P2RY13Q9BPV8 354 aa13.08□□□□□ -0.32
PRKN-205ENST00000366897 SLC30A2Q9BRI3 323 aa13.08□□□□□ -0.32
PRKN-205ENST00000366897 SNTG1Q9NSN8 517 aa13.08□□□□□ -0.32
PRKN-205ENST00000366897 SH3BP4Q9P0V3 963 aa13.08□□□□□ -0.32
PRKN-205ENST00000366897 PCDHGA2Q9Y5H1 932 aa13.08□□□□□ -0.32
PRKN-205ENST00000366897 PNMA8CA0A1B0GUJ8 204 aa13.08□□□□□ -0.32
PRKN-205ENST00000366897 TBL1XO60907 577 aa13.08□□□□□ -0.32
PRKN-205ENST00000366897 ETHE1O95571 254 aa13.08□□□□□ -0.32
PRKN-205ENST00000366897 TRBC1P01850 177 aa13.08□□□□□ -0.32
PRKN-205ENST00000366897 IGHA2P01877 340 aa13.08□□□□□ -0.32
PRKN-205ENST00000366897 AKR1A1P14550 325 aa13.08□□□□□ -0.32
PRKN-205ENST00000366897 AOAHP28039 575 aa13.08□□□□□ -0.32
PRKN-205ENST00000366897 RFX2P48378 723 aa13.08□□□□□ -0.32
PRKN-205ENST00000366897 SSX1Q16384 188 aa13.08□□□□□ -0.32
PRKN-205ENST00000366897 ARMC4Q5T2S8 1044 aa13.08□□□□□ -0.32
PRKN-205ENST00000366897 MFSD14CQ5VZR4 134 aa13.08□□□□□ -0.32
PRKN-205ENST00000366897 BCDIN3DQ7Z5W3 292 aaKnown RBP13.08□□□□□ -0.32
PRKN-205ENST00000366897 GALNT12Q8IXK2 581 aa13.08□□□□□ -0.32
PRKN-205ENST00000366897 SYNPOQ8N3V7 929 aa13.08□□□□□ -0.32
PRKN-205ENST00000366897 ASCC1Q8N9N2 400 aaKnown RBP13.08□□□□□ -0.32
PRKN-205ENST00000366897 LMNTD1Q8N9Z9 388 aa13.08□□□□□ -0.32
PRKN-205ENST00000366897 UBTD2Q8WUN7 234 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms