RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Polr2cP97760 275 aa12.99□□□□□ -0.33
Nup88-201ENSMUST00000035283 Pin1rt1Q3ULQ2 159 aa12.99□□□□□ -0.33
Nup88-201ENSMUST00000035283 Zfp868Q3UTQ6 422 aa12.99□□□□□ -0.33
Nup88-201ENSMUST00000035283 Map4k2Q61161 821 aa12.99□□□□□ -0.33
Nup88-201ENSMUST00000035283 Snx31Q6P8Y7 439 aa12.99□□□□□ -0.33
Nup88-201ENSMUST00000035283 Zc3h14Q8BJ05 735 aaKnown RBP12.99□□□□□ -0.33
Nup88-201ENSMUST00000035283 Tgm4Q8BZH1 670 aa12.99□□□□□ -0.33
Nup88-201ENSMUST00000035283 Abhd18Q8C1A9 464 aa12.99□□□□□ -0.33
Nup88-201ENSMUST00000035283 Ddx52Q8K301 598 aaKnown RBP12.99□□□□□ -0.33
Nup88-201ENSMUST00000035283 Olfr850Q8VFF2 315 aa12.99□□□□□ -0.33
Nup88-201ENSMUST00000035283 Olfr1019Q8VGS3 310 aa12.99□□□□□ -0.33
Nup88-201ENSMUST00000035283 Tcf19Q99KJ5 263 aa12.99□□□□□ -0.33
Nup88-201ENSMUST00000035283 Slc39a5Q9D856 535 aa12.99□□□□□ -0.33
Nup88-201ENSMUST00000035283 Ndel1Q9ERR1 345 aa12.99□□□□□ -0.33
Nup88-201ENSMUST00000035283 Ehd3Q9QXY6 535 aa12.99□□□□□ -0.33
Nup88-201ENSMUST00000035283 Aloxe3Q9WV07 711 aa12.99□□□□□ -0.33
Nup88-201ENSMUST00000035283 Loxl3Q9Z175 754 aa12.99□□□□□ -0.33
Nup88-201ENSMUST00000035283 Rgs6Q9Z2H2 472 aa12.99□□□□□ -0.33
Nup88-201ENSMUST00000035283 Alms1Q8K4E0 3251 aa12.99□□□□□ -0.33
Nup88-201ENSMUST00000035283 Prrg1A2BFE8 218 aa12.99□□□□□ -0.33
Nup88-201ENSMUST00000035283 Esp31A8R0W3 114 aa12.99□□□□□ -0.33
Nup88-201ENSMUST00000035283 A530032D15RikE9Q422 215 aa12.99□□□□□ -0.33
Nup88-201ENSMUST00000035283 Dgcr6O35347 198 aa12.99□□□□□ -0.33
Nup88-201ENSMUST00000035283 HbaP01942 142 aa12.99□□□□□ -0.33
Nup88-201ENSMUST00000035283 MbP04247 154 aa12.99□□□□□ -0.33
Nup88-201ENSMUST00000035283 Nudt1P53368 156 aa12.99□□□□□ -0.33
Nup88-201ENSMUST00000035283 Cyp2c37P56654 490 aa12.99□□□□□ -0.33
Nup88-201ENSMUST00000035283 Rgs14P97492 547 aa12.99□□□□□ -0.33
Nup88-201ENSMUST00000035283 Q3UST5 385 aa12.99□□□□□ -0.33
Nup88-201ENSMUST00000035283 Eef2kmtQ3UZW7 335 aa12.99□□□□□ -0.33
Nup88-201ENSMUST00000035283 ClpbQ60649 677 aa12.99□□□□□ -0.33
Nup88-201ENSMUST00000035283 Ptx4Q6RUU0 478 aa12.99□□□□□ -0.33
Nup88-201ENSMUST00000035283 Vtcn1Q7TSP5 283 aa12.99□□□□□ -0.33
Nup88-201ENSMUST00000035283 Q8BGK9 164 aa12.99□□□□□ -0.33
Nup88-201ENSMUST00000035283 Fbxl14Q8BID8 400 aa12.99□□□□□ -0.33
Nup88-201ENSMUST00000035283 FevQ8QZW2 237 aa12.99□□□□□ -0.33
Nup88-201ENSMUST00000035283 Vmn1r234Q8R298 329 aa12.99□□□□□ -0.33
Nup88-201ENSMUST00000035283 Brd8Q8R3B7 951 aa12.99□□□□□ -0.33
Nup88-201ENSMUST00000035283 Ndufs2Q91WD5 463 aa12.99□□□□□ -0.33
Nup88-201ENSMUST00000035283 Chst15Q91XQ5 561 aa12.99□□□□□ -0.33
Nup88-201ENSMUST00000035283 Prps2Q9CS42 318 aa12.99□□□□□ -0.33
Nup88-201ENSMUST00000035283 Q9D454 513 aa12.99□□□□□ -0.33
Nup88-201ENSMUST00000035283 Efhc2Q9D485 750 aa12.99□□□□□ -0.33
Nup88-201ENSMUST00000035283 Sgk2Q9QZS5 367 aa12.99□□□□□ -0.33
Nup88-201ENSMUST00000035283 Creb3l1Q9Z125 519 aa12.99□□□□□ -0.33
Nup88-201ENSMUST00000035283 Gm13088A2AGW6 460 aa12.98□□□□□ -0.33
Nup88-201ENSMUST00000035283 Zfp808B8JJZ4 753 aa12.98□□□□□ -0.33
Nup88-201ENSMUST00000035283 Rnf165E9QAU8 347 aa12.98□□□□□ -0.33
Nup88-201ENSMUST00000035283 1700122O11RikJ3QPW6 241 aa12.98□□□□□ -0.33
Nup88-201ENSMUST00000035283 Vmn1r31L7N2F1 303 aa12.98□□□□□ -0.33
Nup88-201ENSMUST00000035283 Kpna4O35343 521 aa12.98□□□□□ -0.33
Nup88-201ENSMUST00000035283 Clk4O35493 481 aa12.98□□□□□ -0.33
Nup88-201ENSMUST00000035283 Mybpc3O70468 1270 aaKnown RBP12.98□□□□□ -0.33
Nup88-201ENSMUST00000035283 Cacng1O70578 223 aa12.98□□□□□ -0.33
Nup88-201ENSMUST00000035283 Mtnd1P03888 318 aa12.98□□□□□ -0.33
Nup88-201ENSMUST00000035283 GzmeP08884 248 aa12.98□□□□□ -0.33
Nup88-201ENSMUST00000035283 SrgnP13609 152 aa12.98□□□□□ -0.33
Nup88-201ENSMUST00000035283 SmoP56726 793 aa12.98□□□□□ -0.33
Nup88-201ENSMUST00000035283 Zfp935Q14DI0 353 aa12.98□□□□□ -0.33
Nup88-201ENSMUST00000035283 A1bgQ19LI2 512 aa12.98□□□□□ -0.33
Nup88-201ENSMUST00000035283 PrtgQ2EY15 1191 aa12.98□□□□□ -0.33
Nup88-201ENSMUST00000035283 PomkQ3TUA9 349 aa12.98□□□□□ -0.33
Nup88-201ENSMUST00000035283 Tmub2Q3V209 319 aa12.98□□□□□ -0.33
Nup88-201ENSMUST00000035283 Arhgef15Q5FWH6 849 aa12.98□□□□□ -0.33
Nup88-201ENSMUST00000035283 OclnQ61146 521 aa12.98□□□□□ -0.33
Nup88-201ENSMUST00000035283 Pan3Q640Q5 837 aa12.98□□□□□ -0.33
Nup88-201ENSMUST00000035283 Zc2hc1cQ8CCG1 527 aa12.98□□□□□ -0.33
Nup88-201ENSMUST00000035283 Cdc16Q8R349 620 aa12.98□□□□□ -0.33
Nup88-201ENSMUST00000035283 As3mtQ91WU5 376 aa12.98□□□□□ -0.33
Nup88-201ENSMUST00000035283 Mcoln1Q99J21 580 aa12.98□□□□□ -0.33
Nup88-201ENSMUST00000035283 Mfsd10Q9D2V8 456 aaKnown RBP12.98□□□□□ -0.33
Nup88-201ENSMUST00000035283 Olfr704Q9EPF6 315 aa12.98□□□□□ -0.33
Nup88-201ENSMUST00000035283 Trim39Q9ESN2 488 aa12.98□□□□□ -0.33
Nup88-201ENSMUST00000035283 RgrQ9Z2B3 291 aa12.98□□□□□ -0.33
Nup88-201ENSMUST00000035283 Nlrp1bA1Z198 1177 aa12.98□□□□□ -0.33
Nup88-201ENSMUST00000035283 Btnl6A2CG22 539 aa12.98□□□□□ -0.33
Nup88-201ENSMUST00000035283 Fam71f2B2RXB0 297 aa12.98□□□□□ -0.33
Nup88-201ENSMUST00000035283 Olfr521E9Q519 321 aa12.98□□□□□ -0.33
Nup88-201ENSMUST00000035283 Tsc22d2E9Q7M2 769 aa12.98□□□□□ -0.33
Nup88-201ENSMUST00000035283 Cdh18E9Q9Q6 790 aa12.98□□□□□ -0.33
Nup88-201ENSMUST00000035283 Gm28048F7BCN0 99 aa12.98□□□□□ -0.33
Nup88-201ENSMUST00000035283 Gm17019K7N6W5 255 aa12.98□□□□□ -0.33
Nup88-201ENSMUST00000035283 Gm8897L7N294 181 aa12.98□□□□□ -0.33
Nup88-201ENSMUST00000035283 Bmp4P21275 408 aa12.98□□□□□ -0.33
Nup88-201ENSMUST00000035283 Pax3P24610 479 aa12.98□□□□□ -0.33
Nup88-201ENSMUST00000035283 Hnf1bP27889 558 aa12.98□□□□□ -0.33
Nup88-201ENSMUST00000035283 Hsd17b3P70385 305 aa12.98□□□□□ -0.33
Nup88-201ENSMUST00000035283 Apoa1Q00623 264 aa12.98□□□□□ -0.33
Nup88-201ENSMUST00000035283 Fzd4Q61088 537 aa12.98□□□□□ -0.33
Nup88-201ENSMUST00000035283 Gpr17Q6NS65 339 aa12.98□□□□□ -0.33
Nup88-201ENSMUST00000035283 Rbm45Q8BHN5 476 aaKnown RBP12.98□□□□□ -0.33
Nup88-201ENSMUST00000035283 Dpp9Q8BVG4 862 aa12.98□□□□□ -0.33
Nup88-201ENSMUST00000035283 Nedd4lQ8CFI0 1004 aa12.98□□□□□ -0.33
Nup88-201ENSMUST00000035283 Foxe1Q8R2I0 371 aa12.98□□□□□ -0.33
Nup88-201ENSMUST00000035283 Rpl4Q9D8E6 419 aaKnown RBP12.98□□□□□ -0.33
Nup88-201ENSMUST00000035283 Acot2Q9QYR9 453 aa12.98□□□□□ -0.33
Nup88-201ENSMUST00000035283 Tyk2Q9R117 1184 aa12.98□□□□□ -0.33
Nup88-201ENSMUST00000035283 Skp2Q9Z0Z3 424 aa12.98□□□□□ -0.33
Nup88-201ENSMUST00000035283 Rps6kb2Q9Z1M4 485 aa12.98□□□□□ -0.33
Nup88-201ENSMUST00000035283 Gm28576A0A087WRP6 222 aa12.97□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 48.1 ms