Protein–RNA interactions for Protein: Q8R298

Vmn1r234, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r234Q8R298 Gm25239-201ENSMUST00000174915 86 ntBASIC33,72■■■□□ 2,99
Vmn1r234Q8R298 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC32,68■■■□□ 2,82
Vmn1r234Q8R298 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC31,65■■■□□ 2,66
Vmn1r234Q8R298 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC31,52■■■□□ 2,64
Vmn1r234Q8R298 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC30,85■■■□□ 2,53
Vmn1r234Q8R298 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC30,48■■■□□ 2,47
Vmn1r234Q8R298 Psd-208ENSMUST00000224556 2034 ntBASIC30,47■■■□□ 2,47
Vmn1r234Q8R298 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC30,2■■■□□ 2,43
Vmn1r234Q8R298 Gm15042-201ENSMUST00000120212 883 ntBASIC30,13■■■□□ 2,41
Vmn1r234Q8R298 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC29,78■■■□□ 2,36
Vmn1r234Q8R298 Gm15045-201ENSMUST00000117359 883 ntBASIC29,61■■■□□ 2,33
Vmn1r234Q8R298 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC29,54■■■□□ 2,32
Vmn1r234Q8R298 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC29,53■■■□□ 2,32
Vmn1r234Q8R298 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC29,45■■■□□ 2,3
Vmn1r234Q8R298 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC29,24■■■□□ 2,27
Vmn1r234Q8R298 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC29,23■■■□□ 2,27
Vmn1r234Q8R298 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC29,19■■■□□ 2,26
Vmn1r234Q8R298 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC29,17■■■□□ 2,26
Vmn1r234Q8R298 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC28,97■■■□□ 2,23
Vmn1r234Q8R298 Gm24109-201ENSMUST00000175489 103 ntBASIC28,95■■■□□ 2,22
Vmn1r234Q8R298 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC28,92■■■□□ 2,22
Vmn1r234Q8R298 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC28,75■■■□□ 2,19
Vmn1r234Q8R298 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC28,71■■■□□ 2,19
Vmn1r234Q8R298 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC28,69■■■□□ 2,18
Vmn1r234Q8R298 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC28,69■■■□□ 2,18
Vmn1r234Q8R298 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC28,64■■■□□ 2,17
Vmn1r234Q8R298 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC28,61■■■□□ 2,17
Vmn1r234Q8R298 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC28,56■■■□□ 2,16
Vmn1r234Q8R298 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC28,41■■■□□ 2,14
Vmn1r234Q8R298 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC28,4■■■□□ 2,14
Vmn1r234Q8R298 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC28,37■■■□□ 2,13
Vmn1r234Q8R298 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC28,34■■■□□ 2,13
Vmn1r234Q8R298 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC28,32■■■□□ 2,12
Vmn1r234Q8R298 Gm23366-201ENSMUST00000175022 89 ntBASIC28,24■■■□□ 2,11
Vmn1r234Q8R298 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC28,22■■■□□ 2,11
Vmn1r234Q8R298 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC28,2■■■□□ 2,1
Vmn1r234Q8R298 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC28,15■■■□□ 2,1
Vmn1r234Q8R298 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC28,07■■■□□ 2,08
Vmn1r234Q8R298 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC28,02■■■□□ 2,08
Vmn1r234Q8R298 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC27,97■■■□□ 2,07
Vmn1r234Q8R298 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC27,95■■■□□ 2,06
Vmn1r234Q8R298 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC27,93■■■□□ 2,06
Vmn1r234Q8R298 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC27,86■■■□□ 2,05
Vmn1r234Q8R298 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC27,84■■■□□ 2,05
Vmn1r234Q8R298 Gm10524-201ENSMUST00000181931 1893 ntBASIC27,76■■■□□ 2,04
Vmn1r234Q8R298 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC27,75■■■□□ 2,03
Vmn1r234Q8R298 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC27,7■■■□□ 2,03
Vmn1r234Q8R298 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC27,66■■■□□ 2,02
Vmn1r234Q8R298 AC153911.1-202ENSMUST00000218534 1034 ntBASIC27,66■■■□□ 2,02
Vmn1r234Q8R298 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC27,65■■■□□ 2,02
Vmn1r234Q8R298 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC27,43■■□□□ 1,98
Vmn1r234Q8R298 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC27,27■■□□□ 1,96
Vmn1r234Q8R298 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC27,25■■□□□ 1,95
Vmn1r234Q8R298 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC27,24■■□□□ 1,95
Vmn1r234Q8R298 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC27,19■■□□□ 1,94
Vmn1r234Q8R298 CT025624.2-201ENSMUST00000223609 1909 ntBASIC27,1■■□□□ 1,93
Vmn1r234Q8R298 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC27,1■■□□□ 1,93
Vmn1r234Q8R298 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC27,02■■□□□ 1,92
Vmn1r234Q8R298 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC27,02■■□□□ 1,92
Vmn1r234Q8R298 Gm42596-201ENSMUST00000196305 1958 ntBASIC26,98■■□□□ 1,91
Vmn1r234Q8R298 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC26,97■■□□□ 1,91
Vmn1r234Q8R298 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC26,94■■□□□ 1,9
Vmn1r234Q8R298 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC26,91■■□□□ 1,9
Vmn1r234Q8R298 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC26,88■■□□□ 1,89
Vmn1r234Q8R298 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC26,86■■□□□ 1,89
Vmn1r234Q8R298 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC26,85■■□□□ 1,89
Vmn1r234Q8R298 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC26,84■■□□□ 1,89
Vmn1r234Q8R298 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC26,83■■□□□ 1,89
Vmn1r234Q8R298 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC26,82■■□□□ 1,88
Vmn1r234Q8R298 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC26,8■■□□□ 1,88
Vmn1r234Q8R298 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC26,73■■□□□ 1,87
Vmn1r234Q8R298 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC26,71■■□□□ 1,87
Vmn1r234Q8R298 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC26,67■■□□□ 1,86
Vmn1r234Q8R298 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC26,64■■□□□ 1,86
Vmn1r234Q8R298 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC26,63■■□□□ 1,85
Vmn1r234Q8R298 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC26,62■■□□□ 1,85
Vmn1r234Q8R298 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC26,6■■□□□ 1,85
Vmn1r234Q8R298 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC26,6■■□□□ 1,85
Vmn1r234Q8R298 Gm27325-201ENSMUST00000175467 74 ntBASIC26,54■■□□□ 1,84
Vmn1r234Q8R298 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC26,48■■□□□ 1,83
Vmn1r234Q8R298 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC26,46■■□□□ 1,83
Vmn1r234Q8R298 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC26,44■■□□□ 1,82
Vmn1r234Q8R298 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC26,4■■□□□ 1,82
Vmn1r234Q8R298 Gm25238-201ENSMUST00000174914 89 ntBASIC26,4■■□□□ 1,82
Vmn1r234Q8R298 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC26,37■■□□□ 1,81
Vmn1r234Q8R298 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC26,34■■□□□ 1,81
Vmn1r234Q8R298 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC26,31■■□□□ 1,8
Vmn1r234Q8R298 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC26,31■■□□□ 1,8
Vmn1r234Q8R298 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC26,29■■□□□ 1,8
Vmn1r234Q8R298 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC26,29■■□□□ 1,8
Vmn1r234Q8R298 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC26,28■■□□□ 1,8
Vmn1r234Q8R298 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC26,27■■□□□ 1,8
Vmn1r234Q8R298 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC26,26■■□□□ 1,79
Vmn1r234Q8R298 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC26,24■■□□□ 1,79
Vmn1r234Q8R298 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC26,21■■□□□ 1,79
Vmn1r234Q8R298 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC26,21■■□□□ 1,79
Vmn1r234Q8R298 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC26,21■■□□□ 1,79
Vmn1r234Q8R298 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC26,2■■□□□ 1,78
Vmn1r234Q8R298 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC26,18■■□□□ 1,78
Vmn1r234Q8R298 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC26,12■■□□□ 1,77
Retrieved 100 of 76,532 protein–RNA pairs in 12,1 ms