Protein–RNA interactions for Protein: Q8CCG1

Zc2hc1c, Zinc finger C2HC domain-containing protein 1C, mousemouse

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc2hc1cQ8CCG1 Gm25239-201ENSMUST00000174915 86 ntBASIC39.52■■■■□ 3.92
Zc2hc1cQ8CCG1 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC36.58■■■■□ 3.45
Zc2hc1cQ8CCG1 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC35.98■■■■□ 3.35
Zc2hc1cQ8CCG1 Gm15042-201ENSMUST00000120212 883 ntBASIC34.44■■■■□ 3.1
Zc2hc1cQ8CCG1 Gm24109-201ENSMUST00000175489 103 ntBASIC34.29■■■■□ 3.08
Zc2hc1cQ8CCG1 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC33.87■■■■□ 3.01
Zc2hc1cQ8CCG1 Gm15045-201ENSMUST00000117359 883 ntBASIC33.72■■■□□ 2.99
Zc2hc1cQ8CCG1 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC33.41■■■□□ 2.94
Zc2hc1cQ8CCG1 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC33.33■■■□□ 2.93
Zc2hc1cQ8CCG1 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC33.24■■■□□ 2.91
Zc2hc1cQ8CCG1 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC33.04■■■□□ 2.88
Zc2hc1cQ8CCG1 Gm23366-201ENSMUST00000175022 89 ntBASIC32.92■■■□□ 2.86
Zc2hc1cQ8CCG1 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
Zc2hc1cQ8CCG1 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC32.71■■■□□ 2.83
Zc2hc1cQ8CCG1 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
Zc2hc1cQ8CCG1 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
Zc2hc1cQ8CCG1 AC153911.1-202ENSMUST00000218534 1034 ntBASIC32.02■■■□□ 2.72
Zc2hc1cQ8CCG1 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC31.86■■■□□ 2.69
Zc2hc1cQ8CCG1 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC31.83■■■□□ 2.69
Zc2hc1cQ8CCG1 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC31.8■■■□□ 2.68
Zc2hc1cQ8CCG1 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC31.78■■■□□ 2.68
Zc2hc1cQ8CCG1 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
Zc2hc1cQ8CCG1 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC31.6■■■□□ 2.65
Zc2hc1cQ8CCG1 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
Zc2hc1cQ8CCG1 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC31.48■■■□□ 2.63
Zc2hc1cQ8CCG1 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC31.44■■■□□ 2.62
Zc2hc1cQ8CCG1 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Zc2hc1cQ8CCG1 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Zc2hc1cQ8CCG1 Gm25238-201ENSMUST00000174914 89 ntBASIC31.25■■■□□ 2.59
Zc2hc1cQ8CCG1 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Zc2hc1cQ8CCG1 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC31.24■■■□□ 2.59
Zc2hc1cQ8CCG1 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Zc2hc1cQ8CCG1 Psd-208ENSMUST00000224556 2034 ntBASIC31.15■■■□□ 2.58
Zc2hc1cQ8CCG1 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC31.15■■■□□ 2.58
Zc2hc1cQ8CCG1 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Zc2hc1cQ8CCG1 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC31.1■■■□□ 2.57
Zc2hc1cQ8CCG1 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC30.93■■■□□ 2.54
Zc2hc1cQ8CCG1 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC30.55■■■□□ 2.48
Zc2hc1cQ8CCG1 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC30.48■■■□□ 2.47
Zc2hc1cQ8CCG1 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Zc2hc1cQ8CCG1 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC30.38■■■□□ 2.45
Zc2hc1cQ8CCG1 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC30.37■■■□□ 2.45
Zc2hc1cQ8CCG1 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
Zc2hc1cQ8CCG1 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Zc2hc1cQ8CCG1 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Zc2hc1cQ8CCG1 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Zc2hc1cQ8CCG1 Gm27325-201ENSMUST00000175467 74 ntBASIC30.18■■■□□ 2.42
Zc2hc1cQ8CCG1 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC30.1■■■□□ 2.41
Zc2hc1cQ8CCG1 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC30.09■■■□□ 2.41
Zc2hc1cQ8CCG1 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC29.99■■■□□ 2.39
Zc2hc1cQ8CCG1 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Zc2hc1cQ8CCG1 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC29.96■■■□□ 2.39
Zc2hc1cQ8CCG1 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC29.91■■■□□ 2.38
Zc2hc1cQ8CCG1 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC29.9■■■□□ 2.38
Zc2hc1cQ8CCG1 Gm25262-201ENSMUST00000174934 133 ntBASIC29.86■■■□□ 2.37
Zc2hc1cQ8CCG1 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
Zc2hc1cQ8CCG1 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
Zc2hc1cQ8CCG1 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC29.74■■■□□ 2.35
Zc2hc1cQ8CCG1 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
Zc2hc1cQ8CCG1 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
Zc2hc1cQ8CCG1 Rab21-202ENSMUST00000218831 843 ntBASIC29.62■■■□□ 2.33
Zc2hc1cQ8CCG1 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC29.55■■■□□ 2.32
Zc2hc1cQ8CCG1 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
Zc2hc1cQ8CCG1 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
Zc2hc1cQ8CCG1 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC29.46■■■□□ 2.31
Zc2hc1cQ8CCG1 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
Zc2hc1cQ8CCG1 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
Zc2hc1cQ8CCG1 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
Zc2hc1cQ8CCG1 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC29.39■■■□□ 2.3
Zc2hc1cQ8CCG1 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC29.38■■■□□ 2.29
Zc2hc1cQ8CCG1 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC29.38■■■□□ 2.29
Zc2hc1cQ8CCG1 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC29.3■■■□□ 2.28
Zc2hc1cQ8CCG1 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
Zc2hc1cQ8CCG1 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC29.29■■■□□ 2.28
Zc2hc1cQ8CCG1 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC29.29■■■□□ 2.28
Zc2hc1cQ8CCG1 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC29.25■■■□□ 2.27
Zc2hc1cQ8CCG1 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
Zc2hc1cQ8CCG1 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC29.23■■■□□ 2.27
Zc2hc1cQ8CCG1 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Zc2hc1cQ8CCG1 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC29.17■■■□□ 2.26
Zc2hc1cQ8CCG1 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
Zc2hc1cQ8CCG1 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Zc2hc1cQ8CCG1 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Zc2hc1cQ8CCG1 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC29.13■■■□□ 2.25
Zc2hc1cQ8CCG1 Gm26115-201ENSMUST00000175605 87 ntBASIC29.12■■■□□ 2.25
Zc2hc1cQ8CCG1 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC29.1■■■□□ 2.25
Zc2hc1cQ8CCG1 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
Zc2hc1cQ8CCG1 Gm10524-201ENSMUST00000181931 1893 ntBASIC29.1■■■□□ 2.25
Zc2hc1cQ8CCG1 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC29.06■■■□□ 2.24
Zc2hc1cQ8CCG1 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
Zc2hc1cQ8CCG1 Gm8109-201ENSMUST00000194076 746 ntBASIC29.04■■■□□ 2.24
Zc2hc1cQ8CCG1 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
Zc2hc1cQ8CCG1 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC28.97■■■□□ 2.23
Zc2hc1cQ8CCG1 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
Zc2hc1cQ8CCG1 Gm42596-201ENSMUST00000196305 1958 ntBASIC28.93■■■□□ 2.22
Zc2hc1cQ8CCG1 CT025624.2-201ENSMUST00000223609 1909 ntBASIC28.91■■■□□ 2.22
Zc2hc1cQ8CCG1 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC28.9■■■□□ 2.22
Zc2hc1cQ8CCG1 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC28.87■■■□□ 2.21
Zc2hc1cQ8CCG1 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
Zc2hc1cQ8CCG1 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC28.81■■■□□ 2.2
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms