RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 PAPLNO95428 1278 aa13.18□□□□□ -0.3
THBS3-202ENST00000428962 SEMG1P04279 462 aa13.18□□□□□ -0.3
THBS3-202ENST00000428962 NPPBP16860 134 aa13.18□□□□□ -0.3
THBS3-202ENST00000428962 FPR1P21462 350 aa13.18□□□□□ -0.3
THBS3-202ENST00000428962 IDSP22304 550 aa13.18□□□□□ -0.3
THBS3-202ENST00000428962 DNAJA1P31689 397 aaKnown RBP13.18□□□□□ -0.3
THBS3-202ENST00000428962 PCGF2P35227 344 aa13.18□□□□□ -0.3
THBS3-202ENST00000428962 PIK3CBP42338 1070 aa13.18□□□□□ -0.3
THBS3-202ENST00000428962 SLC6A11P48066 632 aa13.18□□□□□ -0.3
THBS3-202ENST00000428962 RPA4Q13156 261 aa13.18□□□□□ -0.3
THBS3-202ENST00000428962 TUBA3CQ13748 450 aa13.18□□□□□ -0.3
THBS3-202ENST00000428962 NEDD8Q15843 81 aa13.18□□□□□ -0.3
THBS3-202ENST00000428962 LRIT3Q3SXY7 679 aa13.18□□□□□ -0.3
THBS3-202ENST00000428962 FAM78AQ5JUQ0 283 aa13.18□□□□□ -0.3
THBS3-202ENST00000428962 C6orf141Q5SZD1 244 aa13.18□□□□□ -0.3
THBS3-202ENST00000428962 ZNF691Q5VV52 312 aa13.18□□□□□ -0.3
THBS3-202ENST00000428962 NXPE4Q6UWF7 544 aa13.18□□□□□ -0.3
THBS3-202ENST00000428962 TMEM179BQ7Z7N9 219 aa13.18□□□□□ -0.3
THBS3-202ENST00000428962 DCP2Q8IU60 420 aaKnown RBP13.18□□□□□ -0.3
THBS3-202ENST00000428962 CHDHQ8NE62 594 aaPredicted RBP13.18□□□□□ -0.3
THBS3-202ENST00000428962 OR4A15Q8NGL6 344 aa13.18□□□□□ -0.3
THBS3-202ENST00000428962 SMARCD2Q92925 531 aa13.18□□□□□ -0.3
THBS3-202ENST00000428962 C12orf43Q96C57 262 aaKnown RBP13.18□□□□□ -0.3
THBS3-202ENST00000428962 ASB16Q96NS5 453 aa13.18□□□□□ -0.3
THBS3-202ENST00000428962 DOK1Q99704 481 aa13.18□□□□□ -0.3
THBS3-202ENST00000428962 TMEM245Q9H330 911 aa13.18□□□□□ -0.3
THBS3-202ENST00000428962 REEP4Q9H6H4 257 aa13.18□□□□□ -0.3
THBS3-202ENST00000428962 ADPRHL2Q9NX46 363 aa13.18□□□□□ -0.3
THBS3-202ENST00000428962 OBP2AQ9NY56 170 aa13.18□□□□□ -0.3
THBS3-202ENST00000428962 SH3BP4Q9P0V3 963 aa13.18□□□□□ -0.3
THBS3-202ENST00000428962 FZD4Q9ULV1 537 aa13.18□□□□□ -0.3
THBS3-202ENST00000428962 TSC22D4Q9Y3Q8 395 aa13.18□□□□□ -0.3
THBS3-202ENST00000428962 RANBP2P49792 3224 aaKnown RBP13.17□□□□□ -0.3
THBS3-202ENST00000428962 ANKRD33BA6NCL7 494 aa13.17□□□□□ -0.3
THBS3-202ENST00000428962 BCKDKO14874 412 aa13.17□□□□□ -0.3
THBS3-202ENST00000428962 DPM1O60762 260 aa13.17□□□□□ -0.3
THBS3-202ENST00000428962 FKBP9O95302 570 aa13.17□□□□□ -0.3
THBS3-202ENST00000428962 ZNF8P17098 575 aaPredicted RBP13.17□□□□□ -0.3
THBS3-202ENST00000428962 GSTM2P28161 218 aa13.17□□□□□ -0.3
THBS3-202ENST00000428962 RYKP34925 604 aa13.17□□□□□ -0.3
THBS3-202ENST00000428962 PIGAP37287 484 aa13.17□□□□□ -0.3
THBS3-202ENST00000428962 TAP2Q03519 686 aa13.17□□□□□ -0.3
THBS3-202ENST00000428962 SF1Q15637 639 aaKnown RBP13.17□□□□□ -0.3
THBS3-202ENST00000428962 GAB4Q2WGN9 574 aa13.17□□□□□ -0.3
THBS3-202ENST00000428962 CATSPEREQ5SY80 951 aa13.17□□□□□ -0.3
THBS3-202ENST00000428962 ADNP2Q6IQ32 1131 aa13.17□□□□□ -0.3
THBS3-202ENST00000428962 CRTC3Q6UUV7 619 aa13.17□□□□□ -0.3
THBS3-202ENST00000428962 COMMD6Q7Z4G1 85 aa13.17□□□□□ -0.3
THBS3-202ENST00000428962 RBM23Q86U06 439 aaKnown RBP13.17□□□□□ -0.3
THBS3-202ENST00000428962 CHPFQ8IZ52 775 aa13.17□□□□□ -0.3
THBS3-202ENST00000428962 ZFP90Q8TF47 636 aa13.17□□□□□ -0.3
THBS3-202ENST00000428962 SUSD6Q92537 303 aa13.17□□□□□ -0.3
THBS3-202ENST00000428962 HSH2DQ96JZ2 352 aa13.17□□□□□ -0.3
THBS3-202ENST00000428962 HDAC8Q9BY41 377 aa13.17□□□□□ -0.3
THBS3-202ENST00000428962 MYNNQ9NPC7 610 aa13.17□□□□□ -0.3
THBS3-202ENST00000428962 EBF1Q9UH73 591 aa13.17□□□□□ -0.3
THBS3-202ENST00000428962 CDH7Q9ULB5 785 aa13.17□□□□□ -0.3
THBS3-202ENST00000428962 ABCG2Q9UNQ0 655 aa13.17□□□□□ -0.3
THBS3-202ENST00000428962 PCDHGA8Q9Y5G5 932 aa13.17□□□□□ -0.3
THBS3-202ENST00000428962 U3KQV3 271 aa13.17□□□□□ -0.3
THBS3-202ENST00000428962 LRRK1Q38SD2 2015 aa13.17□□□□□ -0.3
THBS3-202ENST00000428962 DENND4AQ7Z401 1863 aa13.16□□□□□ -0.3
THBS3-202ENST00000428962 HEPACAM2A8MVW5 462 aa13.16□□□□□ -0.3
THBS3-202ENST00000428962 MYO1GB0I1T2 1018 aa13.16□□□□□ -0.3
THBS3-202ENST00000428962 RPN2P04844 631 aa13.16□□□□□ -0.3
THBS3-202ENST00000428962 KELP23276 732 aa13.16□□□□□ -0.3
THBS3-202ENST00000428962 ACADLP28330 430 aa13.16□□□□□ -0.3
THBS3-202ENST00000428962 ITGA1P56199 1179 aa13.16□□□□□ -0.3
THBS3-202ENST00000428962 RGNQ15493 299 aa13.16□□□□□ -0.3
THBS3-202ENST00000428962 PRAMEF14Q5SWL7 426 aa13.16□□□□□ -0.3
THBS3-202ENST00000428962 GPR107Q5VW38 600 aa13.16□□□□□ -0.3
THBS3-202ENST00000428962 PRAMEF13Q5VWM6 474 aa13.16□□□□□ -0.3
THBS3-202ENST00000428962 DHRS4L2Q6PKH6 230 aa13.16□□□□□ -0.3
THBS3-202ENST00000428962 LCTLQ6UWM7 567 aa13.16□□□□□ -0.3
THBS3-202ENST00000428962 ADAMTSL4Q6UY14 1074 aa13.16□□□□□ -0.3
THBS3-202ENST00000428962 IKBIPQ70UQ0 350 aa13.16□□□□□ -0.3
THBS3-202ENST00000428962 PIWIL3Q7Z3Z3 882 aaKnown RBP13.16□□□□□ -0.3
THBS3-202ENST00000428962 PDZD3Q86UT5 571 aa13.16□□□□□ -0.3
THBS3-202ENST00000428962 ZNF547Q8IVP9 402 aa13.16□□□□□ -0.3
THBS3-202ENST00000428962 DCUN1D3Q8IWE4 304 aa13.16□□□□□ -0.3
THBS3-202ENST00000428962 KRT78Q8N1N4 520 aa13.16□□□□□ -0.3
THBS3-202ENST00000428962 C11orf65Q8NCR3 313 aa13.16□□□□□ -0.3
THBS3-202ENST00000428962 PIK3C3Q8NEB9 887 aa13.16□□□□□ -0.3
THBS3-202ENST00000428962 OR13F1Q8NGS4 319 aa13.16□□□□□ -0.3
THBS3-202ENST00000428962 GOT1L1Q8NHS2 421 aaPredicted RBP13.16□□□□□ -0.3
THBS3-202ENST00000428962 RAD51AP1Q96B01 352 aa13.16□□□□□ -0.3
THBS3-202ENST00000428962 PPCDCQ96CD2 204 aa13.16□□□□□ -0.3
THBS3-202ENST00000428962 MTERF3Q96E29 417 aa13.16□□□□□ -0.3
THBS3-202ENST00000428962 ZFYVE19Q96K21 471 aa13.16□□□□□ -0.3
THBS3-202ENST00000428962 SAMD11Q96NU1 681 aa13.16□□□□□ -0.3
THBS3-202ENST00000428962 FAM129BQ96TA1 746 aa13.16□□□□□ -0.3
THBS3-202ENST00000428962 DPH2Q9BQC3 489 aaPredicted RBP13.16□□□□□ -0.3
THBS3-202ENST00000428962 CHST8Q9H2A9 424 aa13.16□□□□□ -0.3
THBS3-202ENST00000428962 REEP1Q9H902 201 aa13.16□□□□□ -0.3
THBS3-202ENST00000428962 SFXN1Q9H9B4 322 aa13.16□□□□□ -0.3
THBS3-202ENST00000428962 KIF17Q9P2E2 1029 aa13.16□□□□□ -0.3
THBS3-202ENST00000428962 TMEFF2Q9UIK5 374 aaPredicted RBP13.16□□□□□ -0.3
THBS3-202ENST00000428962 CDC14AQ9UNH5 594 aa13.16□□□□□ -0.3
THBS3-202ENST00000428962 FAF1Q9UNN5 650 aaPredicted RBP13.16□□□□□ -0.3
THBS3-202ENST00000428962 BTBD3Q9Y2F9 522 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms