RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Hoxc11P31313 304 aa18.12■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Apoa1Q00623 264 aa18.12■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Cd244Q07763 397 aa18.12■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Phf12Q5SPL2 1003 aa18.12■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Zc3h11aQ6NZF1 792 aaKnown RBP18.12■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Igsf5Q7TSN7 370 aa18.12■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 CpmQ80V42 443 aa18.12■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Vps37aQ8CHS8 397 aa18.12■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Tmem203Q8R235 136 aa18.12■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Vmn1r234Q8R298 329 aa18.12■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Tspan1Q99J59 240 aa18.12■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Psat1Q99K85 370 aa18.12■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Cstf3Q99LI7 717 aaKnown RBP18.12■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 NarfQ9CYQ7 462 aa18.12■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Acbd7Q9D258 88 aa18.12■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Cldn34b2Q9D9N2 209 aa18.12■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 TheglQ9DA15 459 aa18.12■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 AnkhQ9JHZ2 492 aa18.12■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Znf711A2ANX9 761 aa18.12■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Nt5c1aA3KFX0 365 aa18.12■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Rpl3lE9PWZ3 407 aa18.12■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Zfp169E9Q3R6 731 aa18.12■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Gm3248K7N721 186 aa18.12■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Hoxa4P06798 285 aa18.12■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Aff3P51827 1254 aa18.12■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Slc16a1P53986 493 aa18.12■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Snrpd1P62315 119 aaKnown RBP18.12■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Adra1bP97717 514 aa18.12■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Cpt1aP97742 773 aa18.12■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 ChatQ03059 641 aa18.12■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Fam47cQ14BE7 430 aa18.12■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Taar8aQ5QD07 344 aa18.12■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Zp1Q62005 623 aa18.12■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Sec24dQ6NXL1 1032 aa18.12■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Olfr1308Q7TQX0 320 aa18.12■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Adamtsl4Q80T21 1036 aa18.12■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 A730061H03RikQ8BGD2 154 aa18.12■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Smarcal1Q8BJL0 910 aa18.12■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Bag5Q8CI32 447 aa18.12■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 HopxQ8R1H0 73 aa18.12■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Vmn1r24Q8R2D6 296 aa18.12■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Asb17Q8VHP9 295 aa18.12■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Arrb2Q91YI4 410 aa18.12■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 EefsecQ9JHW4 583 aa18.12■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Cdc20Q9JJ66 499 aa18.12■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Scn5aQ9JJV9 2019 aa18.12■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Igkv10-94A0A075B5L1 115 aa18.11■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Kctd14A0A0U1RNG7 287 aa18.11■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Nkx1-1G3UXB3 402 aa18.11■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Gm5724L7N264 670 aa18.11■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 ChadO55226 358 aa18.11■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 LckP06240 509 aa18.11■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Itgb8Q0VBD0 767 aa18.11■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Hist2h2acQ64523 129 aa18.11■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Larp4bQ6A0A2 741 aaKnown RBP18.11■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 IpmkQ7TT16 396 aa18.11■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 TufmQ8BFR5 452 aa18.11■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Cox14Q8BH51 57 aa18.11■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Ankrd9Q8BH83 326 aa18.11■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Eme1Q8BJW7 570 aa18.11■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Retreg1dQ8VE91 480 aa18.11■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Olfr96Q8VFE3 313 aa18.11■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Slc15a4Q91W98 574 aa18.11■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Rnf167Q91XF4 347 aa18.11■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Abcb8Q9CXJ4 717 aa18.11■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Q9D112 206 aa18.11■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Hyal6Q9D4E9 494 aa18.11■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Fabp12Q9DAK4 132 aa18.11■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Atp1b2P14231 290 aa18.11■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Gbx1P82976 418 aa18.11■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Samd12Q0VE29 161 aa18.11■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Nxf3Q4ZGD9 553 aa18.11■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 IspdQ5RJG7 447 aa18.11■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Fstl1Q62356 306 aa18.11■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Q6PAC4 1279 aa18.11■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Ugt2b35Q8BJL9 529 aa18.11■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 MylipQ8BM54 445 aa18.11■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 PisdQ8BSF4 406 aa18.11■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Ctdsp2Q8BX07 270 aa18.11■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Zfp57Q8C6P8 421 aa18.11■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Smco1Q8CEZ1 214 aa18.11■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Ift80Q8K057 777 aa18.11■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Vmn1r214Q8R279 367 aa18.11■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Camk1Q91YS8 374 aa18.11■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Asb6Q91ZU1 418 aa18.11■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Zdhhc21Q9D270 265 aa18.11■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Aldh7a1Q9DBF1 539 aa18.11■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Myg1Q9JK81 380 aa18.11■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Vps29Q9QZ88 182 aa18.11■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Adam25Q9R159 760 aa18.11■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Slc43a3A2AVZ9 502 aa18.1■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Slc25a54B1AUS6 473 aa18.1■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Vmn1r184E9Q2N4 314 aa18.1■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Gm6811E9Q3Y8 510 aa18.1■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Kpna4O35343 521 aa18.1■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Sult3a1O35403 293 aa18.1■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Klk1b16P04071 261 aa18.1■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 TecP24604 630 aa18.1■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Klkb1P26262 638 aa18.1■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Tacr2P30549 384 aa18.1■□□□□ 0.49
Retrieved 100 of 22,080 RNA–protein pairs in 25.7 ms