RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 BHLHE41Q9C0J9 482 aaPredicted RBP18.48■□□□□ 0.55
PRKCSH-209ENST00000589838 GABARAPL1Q9H0R8 117 aa18.48■□□□□ 0.55
PRKCSH-209ENST00000589838 ATAD3AQ9NVI7 634 aa18.48■□□□□ 0.55
PRKCSH-209ENST00000589838 GULP1Q9UBP9 304 aa18.48■□□□□ 0.55
PRKCSH-209ENST00000589838 ZNF282Q9UDV7 671 aaPredicted RBP18.48■□□□□ 0.55
PRKCSH-209ENST00000589838 ATP6V1HQ9UI12 483 aa18.48■□□□□ 0.55
PRKCSH-209ENST00000589838 KIAA1549LQ6ZVL6 1849 aa18.47■□□□□ 0.55
PRKCSH-209ENST00000589838 LOC100130705A0A1B0GUX0 176 aa18.47■□□□□ 0.55
PRKCSH-209ENST00000589838 RNASET2O00584 256 aaKnown RBP18.47■□□□□ 0.55
PRKCSH-209ENST00000589838 PCDH7O60245 1069 aa18.47■□□□□ 0.55
PRKCSH-209ENST00000589838 MMP20O60882 483 aa18.47■□□□□ 0.55
PRKCSH-209ENST00000589838 POP7O75817 140 aaKnown RBP18.47■□□□□ 0.55
PRKCSH-209ENST00000589838 ETHE1O95571 254 aa18.47■□□□□ 0.55
PRKCSH-209ENST00000589838 FABP3P05413 133 aa18.47■□□□□ 0.55
PRKCSH-209ENST00000589838 HLA-EP13747 358 aa18.47■□□□□ 0.55
PRKCSH-209ENST00000589838 IDSP22304 550 aa18.47■□□□□ 0.55
PRKCSH-209ENST00000589838 ELK4P28324 431 aa18.47■□□□□ 0.55
PRKCSH-209ENST00000589838 GABARAPL2P60520 117 aa18.47■□□□□ 0.55
PRKCSH-209ENST00000589838 KCNAB2Q13303 367 aa18.47■□□□□ 0.55
PRKCSH-209ENST00000589838 PMS2P3Q13401 168 aa18.47■□□□□ 0.55
PRKCSH-209ENST00000589838 STARD3Q14849 445 aa18.47■□□□□ 0.55
PRKCSH-209ENST00000589838 RAB39AQ14964 217 aa18.47■□□□□ 0.55
PRKCSH-209ENST00000589838 SKIV2LQ15477 1246 aaKnown RBP18.47■□□□□ 0.55
PRKCSH-209ENST00000589838 HKDC1Q2TB90 917 aa18.47■□□□□ 0.55
PRKCSH-209ENST00000589838 UNC5DQ6UXZ4 953 aa18.47■□□□□ 0.55
PRKCSH-209ENST00000589838 CBLL1Q75N03 491 aa18.47■□□□□ 0.55
PRKCSH-209ENST00000589838 ERN2Q76MJ5 926 aaKnown RBP18.47■□□□□ 0.55
PRKCSH-209ENST00000589838 DCP2Q8IU60 420 aaKnown RBP18.47■□□□□ 0.55
PRKCSH-209ENST00000589838 OR2L2Q8NH16 312 aa18.47■□□□□ 0.55
PRKCSH-209ENST00000589838 FAM129BQ96TA1 746 aa18.47■□□□□ 0.55
PRKCSH-209ENST00000589838 ADNPQ9H2P0 1102 aa18.47■□□□□ 0.55
PRKCSH-209ENST00000589838 ATXN10Q9UBB4 475 aa18.47■□□□□ 0.55
PRKCSH-209ENST00000589838 DENND4AQ7Z401 1863 aa18.46■□□□□ 0.55
PRKCSH-209ENST00000589838 PRRC2BQ5JSZ5 2229 aaKnown RBP18.46■□□□□ 0.55
PRKCSH-209ENST00000589838 C1QTNF3-AMACRE9PGA6 284 aa18.46■□□□□ 0.55
PRKCSH-209ENST00000589838 SLC16A6O15403 523 aa18.46■□□□□ 0.55
PRKCSH-209ENST00000589838 PI15O43692 258 aa18.46■□□□□ 0.55
PRKCSH-209ENST00000589838 NOL3O60936 208 aaKnown RBP18.46■□□□□ 0.55
PRKCSH-209ENST00000589838 UGT2B11O75310 529 aa18.46■□□□□ 0.55
PRKCSH-209ENST00000589838 PAPLNO95428 1278 aa18.46■□□□□ 0.55
PRKCSH-209ENST00000589838 CPNE6O95741 557 aa18.46■□□□□ 0.55
PRKCSH-209ENST00000589838 ABCB1P08183 1280 aaPredicted RBP18.46■□□□□ 0.55
PRKCSH-209ENST00000589838 RXRGP48443 463 aa18.46■□□□□ 0.55
PRKCSH-209ENST00000589838 METAP1P53582 386 aa18.46■□□□□ 0.55
PRKCSH-209ENST00000589838 SLBPQ14493 270 aaKnown RBP eCLIP18.46■□□□□ 0.55
PRKCSH-209ENST00000589838 C6orf141Q5SZD1 244 aa18.46■□□□□ 0.55
PRKCSH-209ENST00000589838 TMEM179BQ7Z7N9 219 aa18.46■□□□□ 0.55
PRKCSH-209ENST00000589838 TRIM74Q86UV6 250 aa18.46■□□□□ 0.55
PRKCSH-209ENST00000589838 PTOV1Q86YD1 416 aa18.46■□□□□ 0.55
PRKCSH-209ENST00000589838 HS3ST5Q8IZT8 346 aa18.46■□□□□ 0.55
PRKCSH-209ENST00000589838 SYNPOQ8N3V7 929 aa18.46■□□□□ 0.55
PRKCSH-209ENST00000589838 GPR156Q8NFN8 814 aa18.46■□□□□ 0.55
PRKCSH-209ENST00000589838 CXorf40AQ8TE69 158 aa18.46■□□□□ 0.55
PRKCSH-209ENST00000589838 SMARCD2Q92925 531 aa18.46■□□□□ 0.55
PRKCSH-209ENST00000589838 RAB7BQ96AH8 199 aa18.46■□□□□ 0.55
PRKCSH-209ENST00000589838 MAGED4Q96JG8 741 aa18.46■□□□□ 0.55
PRKCSH-209ENST00000589838 AMBRA1Q9C0C7 1298 aa18.46■□□□□ 0.55
PRKCSH-209ENST00000589838 CCDC177Q9NQR7 707 aaPredicted RBP18.46■□□□□ 0.55
PRKCSH-209ENST00000589838 TMEM9Q9P0T7 183 aa18.46■□□□□ 0.55
PRKCSH-209ENST00000589838 PCM1Q15154 2024 aa18.46■□□□□ 0.55
PRKCSH-209ENST00000589838 ABCB7O75027 752 aa18.46■□□□□ 0.54
PRKCSH-209ENST00000589838 ITGAMP11215 1152 aa18.46■□□□□ 0.54
PRKCSH-209ENST00000589838 CRHBPP24387 322 aa18.46■□□□□ 0.54
PRKCSH-209ENST00000589838 DCKP27707 260 aa18.46■□□□□ 0.54
PRKCSH-209ENST00000589838 DNAJA1P31689 397 aaKnown RBP18.46■□□□□ 0.54
PRKCSH-209ENST00000589838 RYKP34925 604 aa18.46■□□□□ 0.54
PRKCSH-209ENST00000589838 ZNF763Q0D2J5 394 aa18.46■□□□□ 0.54
PRKCSH-209ENST00000589838 TSTA3Q13630 321 aaPredicted RBP18.46■□□□□ 0.54
PRKCSH-209ENST00000589838 TUBA3CQ13748 450 aa18.46■□□□□ 0.54
PRKCSH-209ENST00000589838 ZNF234Q14588 700 aa18.46■□□□□ 0.54
PRKCSH-209ENST00000589838 PDGFRLQ15198 375 aa18.46■□□□□ 0.54
PRKCSH-209ENST00000589838 FAM78AQ5JUQ0 283 aa18.46■□□□□ 0.54
PRKCSH-209ENST00000589838 SLC5A11Q8WWX8 675 aa18.46■□□□□ 0.54
PRKCSH-209ENST00000589838 SUSD6Q92537 303 aa18.46■□□□□ 0.54
PRKCSH-209ENST00000589838 REEP4Q9H6H4 257 aa18.46■□□□□ 0.54
PRKCSH-209ENST00000589838 SH3BP4Q9P0V3 963 aa18.46■□□□□ 0.54
PRKCSH-209ENST00000589838 FZD4Q9ULV1 537 aa18.46■□□□□ 0.54
PRKCSH-209ENST00000589838 PDE4DIPQ5VU43 2346 aa18.46■□□□□ 0.54
PRKCSH-209ENST00000589838 K7ESM1 405 aa18.45■□□□□ 0.54
PRKCSH-209ENST00000589838 SEMG1P04279 462 aa18.45■□□□□ 0.54
PRKCSH-209ENST00000589838 PIK3CBP42338 1070 aa18.45■□□□□ 0.54
PRKCSH-209ENST00000589838 YAP1P46937 504 aaKnown RBP18.45■□□□□ 0.54
PRKCSH-209ENST00000589838 GRSF1Q12849 480 aaKnown RBP eCLIP18.45■□□□□ 0.54
PRKCSH-209ENST00000589838 RPA4Q13156 261 aa18.45■□□□□ 0.54
PRKCSH-209ENST00000589838 TEAD4Q15561 434 aa18.45■□□□□ 0.54
PRKCSH-209ENST00000589838 SF1Q15637 639 aaKnown RBP18.45■□□□□ 0.54
PRKCSH-209ENST00000589838 CATSPEREQ5SY80 951 aa18.45■□□□□ 0.54
PRKCSH-209ENST00000589838 ANKRD26P1Q6NSI1 321 aa18.45■□□□□ 0.54
PRKCSH-209ENST00000589838 NXPE4Q6UWF7 544 aa18.45■□□□□ 0.54
PRKCSH-209ENST00000589838 PIWIL3Q7Z3Z3 882 aaKnown RBP18.45■□□□□ 0.54
PRKCSH-209ENST00000589838 RBM23Q86U06 439 aaKnown RBP18.45■□□□□ 0.54
PRKCSH-209ENST00000589838 HORMAD1Q86X24 394 aa18.45■□□□□ 0.54
PRKCSH-209ENST00000589838 SETD9Q8NE22 299 aa18.45■□□□□ 0.54
PRKCSH-209ENST00000589838 OR4A15Q8NGL6 344 aa18.45■□□□□ 0.54
PRKCSH-209ENST00000589838 ZFP90Q8TF47 636 aa18.45■□□□□ 0.54
PRKCSH-209ENST00000589838 C12orf43Q96C57 262 aaKnown RBP18.45■□□□□ 0.54
PRKCSH-209ENST00000589838 ASB16Q96NS5 453 aa18.45■□□□□ 0.54
PRKCSH-209ENST00000589838 DOK1Q99704 481 aa18.45■□□□□ 0.54
PRKCSH-209ENST00000589838 TMEM245Q9H330 911 aa18.45■□□□□ 0.54
PRKCSH-209ENST00000589838 DMRT3Q9NQL9 472 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms