RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 SLAMF1Q13291 335 aa13.52□□□□□ -0.25
APOB-202ENST00000399256 DOC2BQ14184 412 aa13.52□□□□□ -0.25
APOB-202ENST00000399256 E2F2Q14209 437 aa13.52□□□□□ -0.25
APOB-202ENST00000399256 GNASQ5JWF2 1037 aa13.52□□□□□ -0.25
APOB-202ENST00000399256 ZBTB2Q8N680 514 aa13.52□□□□□ -0.25
APOB-202ENST00000399256 ZNF784Q8NCA9 323 aaPredicted RBP13.52□□□□□ -0.25
APOB-202ENST00000399256 NIPSNAP1Q9BPW8 284 aa13.52□□□□□ -0.25
APOB-202ENST00000399256 CCM2Q9BSQ5 444 aa13.52□□□□□ -0.25
APOB-202ENST00000399256 CCDC32Q9BV29 185 aa13.52□□□□□ -0.25
APOB-202ENST00000399256 KATNAL1Q9BW62 490 aa13.52□□□□□ -0.25
APOB-202ENST00000399256 BEX2Q9BXY8 128 aa13.52□□□□□ -0.25
APOB-202ENST00000399256 SLC29A3Q9BZD2 475 aa13.52□□□□□ -0.25
APOB-202ENST00000399256 MMP28Q9H239 520 aa13.52□□□□□ -0.25
APOB-202ENST00000399256 EXOSC4Q9NPD3 245 aaKnown RBP13.52□□□□□ -0.25
APOB-202ENST00000399256 PADI3Q9ULW8 664 aa13.52□□□□□ -0.25
APOB-202ENST00000399256 GABRQQ9UN88 632 aa13.52□□□□□ -0.25
APOB-202ENST00000399256 DUSP12Q9UNI6 340 aa13.52□□□□□ -0.25
APOB-202ENST00000399256 TDRD15B5MCY1 1934 aaKnown RBP13.51□□□□□ -0.25
APOB-202ENST00000399256 CCRL2O00421 344 aa13.51□□□□□ -0.25
APOB-202ENST00000399256 ARHGAP33O14559 1287 aa13.51□□□□□ -0.25
APOB-202ENST00000399256 SLITRK5O94991 958 aa13.51□□□□□ -0.25
APOB-202ENST00000399256 ALDH1A1P00352 501 aa13.51□□□□□ -0.25
APOB-202ENST00000399256 OPN1SWP03999 348 aa13.51□□□□□ -0.25
APOB-202ENST00000399256 ZNF865P0CJ78 1059 aaPredicted RBP13.51□□□□□ -0.25
APOB-202ENST00000399256 DDOSTP39656 456 aa13.51□□□□□ -0.25
APOB-202ENST00000399256 SGSHP51688 502 aa13.51□□□□□ -0.25
APOB-202ENST00000399256 CCL14Q16627 93 aa13.51□□□□□ -0.25
APOB-202ENST00000399256 RNF165Q6ZSG1 346 aa13.51□□□□□ -0.25
APOB-202ENST00000399256 B3GNT7Q8NFL0 401 aa13.51□□□□□ -0.25
APOB-202ENST00000399256 OR10G2Q8NGC3 310 aa13.51□□□□□ -0.25
APOB-202ENST00000399256 GPR151Q8TDV0 419 aa13.51□□□□□ -0.25
APOB-202ENST00000399256 SOCS4Q8WXH5 440 aa13.51□□□□□ -0.25
APOB-202ENST00000399256 CNPPD1Q9BV87 410 aa13.51□□□□□ -0.25
APOB-202ENST00000399256 ASB8Q9H765 288 aa13.51□□□□□ -0.25
APOB-202ENST00000399256 SMURF1Q9HCE7 757 aa13.51□□□□□ -0.25
APOB-202ENST00000399256 OLA1Q9NTK5 396 aaKnown RBP13.51□□□□□ -0.25
APOB-202ENST00000399256 CFL2Q9Y281 166 aa13.51□□□□□ -0.25
APOB-202ENST00000399256 PCDHGB3Q9Y5G1 929 aa13.51□□□□□ -0.25
APOB-202ENST00000399256 MAU2Q9Y6X3 613 aa13.51□□□□□ -0.25
APOB-202ENST00000399256 POU2F1P14859 743 aa13.51□□□□□ -0.25
APOB-202ENST00000399256 GPX2P18283 190 aa13.51□□□□□ -0.25
APOB-202ENST00000399256 PURAQ00577 322 aaKnown RBP13.51□□□□□ -0.25
APOB-202ENST00000399256 SF1Q15637 639 aaKnown RBP13.51□□□□□ -0.25
APOB-202ENST00000399256 SMUG1Q53HV7 270 aa13.51□□□□□ -0.25
APOB-202ENST00000399256 ERICH5Q6P6B1 374 aa13.51□□□□□ -0.25
APOB-202ENST00000399256 PGBD3Q8N328 593 aa13.51□□□□□ -0.25
APOB-202ENST00000399256 PAF1Q8N7H5 531 aa13.51□□□□□ -0.25
APOB-202ENST00000399256 TMCO6Q96DC7 493 aa13.51□□□□□ -0.25
APOB-202ENST00000399256 RAD9AQ99638 391 aa13.51□□□□□ -0.25
APOB-202ENST00000399256 IMPAD1Q9NX62 359 aa13.51□□□□□ -0.25
APOB-202ENST00000399256 PCDHB5Q9Y5E4 795 aa13.51□□□□□ -0.25
APOB-202ENST00000399256 A0A1W2PQ67 120 aa13.5□□□□□ -0.25
APOB-202ENST00000399256 MYADML2A6NDP7 307 aa13.5□□□□□ -0.25
APOB-202ENST00000399256 H3BM21 787 aa13.5□□□□□ -0.25
APOB-202ENST00000399256 SUV39H1O43463 412 aa13.5□□□□□ -0.25
APOB-202ENST00000399256 RHOCP08134 193 aa13.5□□□□□ -0.25
APOB-202ENST00000399256 HOXD11P31277 338 aaPredicted RBP13.5□□□□□ -0.25
APOB-202ENST00000399256 CASP9P55211 416 aa13.5□□□□□ -0.25
APOB-202ENST00000399256 DAB2P98082 770 aa13.5□□□□□ -0.25
APOB-202ENST00000399256 PPIGQ13427 754 aaKnown RBP eCLIP13.5□□□□□ -0.251e-323■□□□□ 8.2
APOB-202ENST00000399256 BAK1Q16611 211 aa13.5□□□□□ -0.25
APOB-202ENST00000399256 UGT8Q16880 541 aa13.5□□□□□ -0.25
APOB-202ENST00000399256 FAM214AQ32MH5 1076 aa13.5□□□□□ -0.25
APOB-202ENST00000399256 MLIPQ5VWP3 458 aa13.5□□□□□ -0.25
APOB-202ENST00000399256 GDF6Q6KF10 455 aaPredicted RBP13.5□□□□□ -0.25
APOB-202ENST00000399256 TTC23LQ6PF05 361 aa13.5□□□□□ -0.25
APOB-202ENST00000399256 C16orf59Q7L2K0 433 aa13.5□□□□□ -0.25
APOB-202ENST00000399256 ZNF280BQ86YH2 543 aa13.5□□□□□ -0.25
APOB-202ENST00000399256 SYT12Q8IV01 421 aa13.5□□□□□ -0.25
APOB-202ENST00000399256 UBTD2Q8WUN7 234 aa13.5□□□□□ -0.25
APOB-202ENST00000399256 MGLLQ99685 303 aa13.5□□□□□ -0.25
APOB-202ENST00000399256 ADAM2Q99965 735 aa13.5□□□□□ -0.25
APOB-202ENST00000399256 BBS2Q9BXC9 721 aa13.5□□□□□ -0.25
APOB-202ENST00000399256 NOD1Q9Y239 953 aa13.5□□□□□ -0.25
APOB-202ENST00000399256 PRG3Q9Y2Y8 225 aaPredicted RBP13.5□□□□□ -0.25
APOB-202ENST00000399256 GRIP1Q9Y3R0 1128 aa13.5□□□□□ -0.25
APOB-202ENST00000399256 PCDHGA2Q9Y5H1 932 aa13.5□□□□□ -0.25
APOB-202ENST00000399256 CFAP20Q9Y6A4 193 aaKnown RBP13.5□□□□□ -0.25
APOB-202ENST00000399256 PLXNA3P51805 1871 aa13.5□□□□□ -0.25
APOB-202ENST00000399256 MEIOCA2RUB1 952 aa13.5□□□□□ -0.25
APOB-202ENST00000399256 YY2O15391 372 aa13.5□□□□□ -0.25
APOB-202ENST00000399256 GPX5O75715 221 aa13.5□□□□□ -0.25
APOB-202ENST00000399256 ALX3O95076 343 aa13.5□□□□□ -0.25
APOB-202ENST00000399256 IGHA2P01877 340 aa13.5□□□□□ -0.25
APOB-202ENST00000399256 COX7A2P14406 83 aa13.5□□□□□ -0.25
APOB-202ENST00000399256 HOXC8P31273 242 aa13.5□□□□□ -0.25
APOB-202ENST00000399256 HNF4AP41235 474 aa13.5□□□□□ -0.25
APOB-202ENST00000399256 GALK2Q01415 458 aa13.5□□□□□ -0.25
APOB-202ENST00000399256 SMARCB1Q12824 385 aa13.5□□□□□ -0.25
APOB-202ENST00000399256 CSTF3Q12996 717 aaKnown RBP13.5□□□□□ -0.25
APOB-202ENST00000399256 TRIM60Q495X7 471 aa13.5□□□□□ -0.25
APOB-202ENST00000399256 LRRC66Q68CR7 880 aa13.5□□□□□ -0.25
APOB-202ENST00000399256 TSEN54Q7Z6J9 526 aaKnown RBP13.5□□□□□ -0.25
APOB-202ENST00000399256 ST13P5Q8NFI4 369 aaPredicted RBP13.5□□□□□ -0.25
APOB-202ENST00000399256 VANGL1Q8TAA9 524 aaPredicted RBP13.5□□□□□ -0.25
APOB-202ENST00000399256 FYTTD1Q96QD9 318 aaKnown RBP13.5□□□□□ -0.25
APOB-202ENST00000399256 SEPT5Q99719 369 aaPredicted RBP13.5□□□□□ -0.25
APOB-202ENST00000399256 ARHGAP39Q9C0H5 1083 aa13.5□□□□□ -0.25
APOB-202ENST00000399256 TRIM39Q9HCM9 518 aa13.5□□□□□ -0.25
APOB-202ENST00000399256 ARL15Q9NXU5 204 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms