RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 CNIH4Q9P003 139 aa3.82□□□□□ -1.8
SMCO3-201ENST00000316048 MYO6Q9UM54 1294 aa3.82□□□□□ -1.8
SMCO3-201ENST00000316048 MRPL11Q9Y3B7 192 aaKnown RBP3.82□□□□□ -1.8
SMCO3-201ENST00000316048 NFS1Q9Y697 457 aa3.82□□□□□ -1.8
SMCO3-201ENST00000316048 GREB1LQ9C091 1923 aaPredicted RBP3.82□□□□□ -1.8
SMCO3-201ENST00000316048 MYH4Q9Y623 1939 aa3.82□□□□□ -1.8
SMCO3-201ENST00000316048 CACNA1IQ9P0X4 2223 aa3.81□□□□□ -1.8
SMCO3-201ENST00000316048 PSME4Q14997 1843 aa3.81□□□□□ -1.8
SMCO3-201ENST00000316048 KIF13BQ9NQT8 1826 aa3.81□□□□□ -1.8
SMCO3-201ENST00000316048 TEX13DA0A0J9YY54 714 aaPredicted RBP3.81□□□□□ -1.8
SMCO3-201ENST00000316048 PVALEFA0A1B0GWK0 134 aa3.81□□□□□ -1.8
SMCO3-201ENST00000316048 A0A1W2PPK0 400 aa3.81□□□□□ -1.8
SMCO3-201ENST00000316048 BICDL2A1A5D9 508 aa3.81□□□□□ -1.8
SMCO3-201ENST00000316048 SMIM30A4D0T7 59 aa3.81□□□□□ -1.8
SMCO3-201ENST00000316048 DNAJC9-AS1A6NH13 148 aa3.81□□□□□ -1.8
SMCO3-201ENST00000316048 ZNF587BE7ETH6 402 aa3.81□□□□□ -1.8
SMCO3-201ENST00000316048 EIF3DO15371 548 aaKnown RBP eCLIP3.81□□□□□ -1.8
SMCO3-201ENST00000316048 SELENOFO60613 162 aa3.81□□□□□ -1.8
SMCO3-201ENST00000316048 WDR1O75083 606 aa3.81□□□□□ -1.8
SMCO3-201ENST00000316048 TDP2O95551 362 aa3.81□□□□□ -1.8
SMCO3-201ENST00000316048 TPM2P07951 284 aa3.81□□□□□ -1.8
SMCO3-201ENST00000316048 TPM1P09493 284 aa3.81□□□□□ -1.8
SMCO3-201ENST00000316048 POLR2MP0CAP2 368 aa3.81□□□□□ -1.8
SMCO3-201ENST00000316048 ZNF18P17022 549 aa3.81□□□□□ -1.8
SMCO3-201ENST00000316048 CALRP27797 417 aaKnown RBP3.81□□□□□ -1.8
SMCO3-201ENST00000316048 CASP1P29466 404 aa3.81□□□□□ -1.8
SMCO3-201ENST00000316048 LHX1P48742 406 aa3.81□□□□□ -1.8
SMCO3-201ENST00000316048 GMPSP49915 693 aaPredicted RBP3.81□□□□□ -1.8
SMCO3-201ENST00000316048 HMGA2P52926 109 aa3.81□□□□□ -1.8
SMCO3-201ENST00000316048 STX17P56962 302 aa3.81□□□□□ -1.8
SMCO3-201ENST00000316048 NANOS3P60323 173 aaKnown RBP3.81□□□□□ -1.8
SMCO3-201ENST00000316048 UBXN1Q04323 297 aa3.81□□□□□ -1.8
SMCO3-201ENST00000316048 RELQ04864 619 aaPredicted RBP3.81□□□□□ -1.8
SMCO3-201ENST00000316048 TAZQ16635 292 aa3.81□□□□□ -1.8
SMCO3-201ENST00000316048 USH1GQ495M9 461 aa3.81□□□□□ -1.8
SMCO3-201ENST00000316048 SPECC1LQ69YQ0 1117 aa3.81□□□□□ -1.8
SMCO3-201ENST00000316048 MFSD12Q6NUT3 480 aa3.81□□□□□ -1.8
SMCO3-201ENST00000316048 C11orf88Q6PI97 169 aa3.81□□□□□ -1.8
SMCO3-201ENST00000316048 VSTM4Q8IW00 320 aa3.81□□□□□ -1.8
SMCO3-201ENST00000316048 MAML2Q8IZL2 1156 aaPredicted RBP3.81□□□□□ -1.8
SMCO3-201ENST00000316048 PAPD5Q8NDF8 572 aaKnown RBP3.81□□□□□ -1.8
SMCO3-201ENST00000316048 CCDC112Q8NEF3 446 aa3.81□□□□□ -1.8
SMCO3-201ENST00000316048 NELFBQ8WX92 580 aa3.81□□□□□ -1.8
SMCO3-201ENST00000316048 FIG4Q92562 907 aa3.81□□□□□ -1.8
SMCO3-201ENST00000316048 MTBPQ96DY7 904 aa3.81□□□□□ -1.8
SMCO3-201ENST00000316048 MTERF3Q96E29 417 aa3.81□□□□□ -1.8
SMCO3-201ENST00000316048 CABS1Q96KC9 395 aa3.81□□□□□ -1.8
SMCO3-201ENST00000316048 FAM20AQ96MK3 541 aa3.81□□□□□ -1.8
SMCO3-201ENST00000316048 INPP5KQ9BT40 448 aa3.81□□□□□ -1.8
SMCO3-201ENST00000316048 GTPBP2Q9BX10 602 aaKnown RBP3.81□□□□□ -1.8
SMCO3-201ENST00000316048 TMPRSS5Q9H3S3 457 aa3.81□□□□□ -1.8
SMCO3-201ENST00000316048 LMAN1LQ9HAT1 526 aa3.81□□□□□ -1.8
SMCO3-201ENST00000316048 DNAJC4Q9NNZ3 241 aa3.81□□□□□ -1.8
SMCO3-201ENST00000316048 SAMSN1Q9NSI8 373 aaKnown RBP3.81□□□□□ -1.8
SMCO3-201ENST00000316048 EXOC1Q9NV70 894 aa3.81□□□□□ -1.8
SMCO3-201ENST00000316048 SIX4Q9UIU6 781 aa3.81□□□□□ -1.8
SMCO3-201ENST00000316048 ZNF646O15015 1829 aaPredicted RBP3.81□□□□□ -1.8
SMCO3-201ENST00000316048 ABCB11O95342 1321 aa3.8□□□□□ -1.8
SMCO3-201ENST00000316048 KIF2AO00139 706 aaPredicted RBP3.8□□□□□ -1.8
SMCO3-201ENST00000316048 SLC37A4O43826 429 aa3.8□□□□□ -1.8
SMCO3-201ENST00000316048 FGFR1OPO95684 399 aaKnown RBP3.8□□□□□ -1.8
SMCO3-201ENST00000316048 CCT6AP40227 531 aaKnown RBP3.8□□□□□ -1.8
SMCO3-201ENST00000316048 WNT5AP41221 380 aa3.8□□□□□ -1.8
SMCO3-201ENST00000316048 NAGLUP54802 743 aa3.8□□□□□ -1.8
SMCO3-201ENST00000316048 SNAP25P60880 206 aa3.8□□□□□ -1.8
SMCO3-201ENST00000316048 ASIC1P78348 528 aa3.8□□□□□ -1.8
SMCO3-201ENST00000316048 DMPKQ09013 629 aa3.8□□□□□ -1.8
SMCO3-201ENST00000316048 SHROOM1Q2M3G4 852 aaPredicted RBP3.8□□□□□ -1.8
SMCO3-201ENST00000316048 HSP90AA4PQ58FG1 418 aa3.8□□□□□ -1.8
SMCO3-201ENST00000316048 OR7E24Q6IFN5 339 aa3.8□□□□□ -1.8
SMCO3-201ENST00000316048 ACER1Q8TDN7 264 aa3.8□□□□□ -1.8
SMCO3-201ENST00000316048 SEPT1Q8WYJ6 367 aa3.8□□□□□ -1.8
SMCO3-201ENST00000316048 RAD54LQ92698 747 aa3.8□□□□□ -1.8
SMCO3-201ENST00000316048 MOB3AQ96BX8 217 aa3.8□□□□□ -1.8
SMCO3-201ENST00000316048 TMEM19Q96HH6 336 aa3.8□□□□□ -1.8
SMCO3-201ENST00000316048 MBOAT7Q96N66 472 aa3.8□□□□□ -1.8
SMCO3-201ENST00000316048 SLX1AQ9BQ83 275 aa3.8□□□□□ -1.8
SMCO3-201ENST00000316048 SLC2A11Q9BYW1 496 aa3.8□□□□□ -1.8
SMCO3-201ENST00000316048 TRIM9Q9C026 710 aa3.8□□□□□ -1.8
SMCO3-201ENST00000316048 RETREG1Q9H6L5 497 aa3.8□□□□□ -1.8
SMCO3-201ENST00000316048 PYCARDQ9ULZ3 195 aa3.8□□□□□ -1.8
SMCO3-201ENST00000316048 YIPF1Q9Y548 306 aa3.8□□□□□ -1.8
SMCO3-201ENST00000316048 SIPA1L1O43166 1804 aa3.8□□□□□ -1.8
SMCO3-201ENST00000316048 ZSCAN12O43309 604 aa3.8□□□□□ -1.8
SMCO3-201ENST00000316048 EDIL3O43854 480 aa3.8□□□□□ -1.8
SMCO3-201ENST00000316048 KLRC4O43908 158 aa3.8□□□□□ -1.8
SMCO3-201ENST00000316048 GPR137BO60478 399 aa3.8□□□□□ -1.8
SMCO3-201ENST00000316048 LIPFP07098 398 aa3.8□□□□□ -1.8
SMCO3-201ENST00000316048 CSN3P07498 182 aa3.8□□□□□ -1.8
SMCO3-201ENST00000316048 TMEM191BP0C7N4 346 aa3.8□□□□□ -1.8
SMCO3-201ENST00000316048 TCEA1P23193 301 aaKnown RBP3.8□□□□□ -1.8
SMCO3-201ENST00000316048 ACAT1P24752 427 aaKnown RBP3.8□□□□□ -1.8
SMCO3-201ENST00000316048 CCNE1P24864 410 aa3.8□□□□□ -1.8
SMCO3-201ENST00000316048 PSMB4P28070 264 aa3.8□□□□□ -1.8
SMCO3-201ENST00000316048 CD38P28907 300 aa3.8□□□□□ -1.8
SMCO3-201ENST00000316048 YBEYP58557 167 aaPredicted RBP3.8□□□□□ -1.8
SMCO3-201ENST00000316048 ZNF234Q14588 700 aa3.8□□□□□ -1.8
SMCO3-201ENST00000316048 PTPN14Q15678 1187 aa3.8□□□□□ -1.8
SMCO3-201ENST00000316048 PHLDA2Q53GA4 152 aa3.8□□□□□ -1.8
SMCO3-201ENST00000316048 GLRA4Q5JXX5 417 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms