RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Rgs20Q9QZB1 239 aa22.11■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Sec14l5B2RXM5 696 aa22.11■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Vmn2r4K7N784 913 aa22.11■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Dync1i2O88487 612 aaKnown RBP22.11■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Esr1P19785 599 aa22.11■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Elk4P41158 430 aa22.11■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Emp1P47801 160 aa22.11■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Ppp3cbP48453 525 aa22.11■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Epb42P49222 691 aa22.11■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Nanos3P60324 178 aa22.11■■□□□ 1.13
Upf3a-201ENSMUST00000043767 NrtnP97463 195 aa22.11■■□□□ 1.13
Upf3a-201ENSMUST00000043767 CamkvQ3UHL1 512 aa22.11■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Rhox11Q810N8 206 aa22.11■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Stx5Q8K1E0 355 aa22.11■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Defb35Q8R2I3 63 aa22.11■■□□□ 1.13
Upf3a-201ENSMUST00000043767 MydgfQ9CPT4 166 aa22.11■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Tma16Q9CR02 221 aaKnown RBP22.11■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Tmprss6Q9DBI0 811 aa22.11■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Morf4l2Q9R0Q4 288 aa22.11■■□□□ 1.13
Upf3a-201ENSMUST00000043767 TectaO08523 2155 aa22.11■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Tgm7A2ART8 616 aa22.1■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Spdye4cI6XKQ3 339 aa22.1■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Surf2P09926 257 aaKnown RBP22.1■■□□□ 1.13
Upf3a-201ENSMUST00000043767 H2-Q7P14429 334 aa22.1■■□□□ 1.13
Upf3a-201ENSMUST00000043767 H2-Q9P14431 200 aa22.1■■□□□ 1.13
Upf3a-201ENSMUST00000043767 CtnsP57757 367 aa22.1■■□□□ 1.13
Upf3a-201ENSMUST00000043767 UrodP70697 367 aa22.1■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Kcnh6Q32ME0 950 aa22.1■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Trim67Q505D9 768 aa22.1■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Ostf1Q62422 215 aa22.1■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Actr5Q80US4 605 aaKnown RBP22.1■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Irf2bp1Q8R3Y8 584 aa22.1■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Pcolce2Q8R4W6 414 aa22.1■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Mtif2Q91YJ5 727 aaKnown RBP22.1■■□□□ 1.13
Upf3a-201ENSMUST00000043767 GatbQ99JT1 557 aa22.1■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Echdc3Q9D7J9 300 aa22.1■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Q9DAR0 182 aa22.1■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Igkv7-33P01632 114 aa22.1■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Rb1P13405 921 aa22.1■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Ephx2P34914 554 aa22.1■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Gm14226Q3TZL0 686 aa22.1■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Dnajc11Q5U458 559 aa22.1■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Ptx4Q6RUU0 478 aa22.1■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Rfx4Q7TNK1 735 aa22.1■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Znf423Q80TS5 1292 aa22.1■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Fjx1Q8BQB4 450 aa22.1■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Aqp12Q8CHJ2 290 aa22.1■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Acsm2Q8K0L3 575 aa22.1■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Ccm2Q8K2Y9 453 aa22.1■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Olfr853Q8VGG6 305 aa22.1■■□□□ 1.13
Upf3a-201ENSMUST00000043767 EdaraddQ8VHX2 208 aa22.1■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Bpifa3Q9D9J8 232 aa22.1■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Tspan6O70401 245 aa22.09■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Pld2P97813 933 aa22.09■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Bcl2a1Q07440 172 aa22.09■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Taar7bQ5QD11 358 aa22.09■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Ifi47Q61635 420 aa22.09■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Pou4f2Q63934 411 aa22.09■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Cpsf6Q6NVF9 551 aaKnown RBP22.09■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Olfr1037Q7TR84 321 aa22.09■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Pcdh19Q80TF3 1145 aa22.09■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Trmt12Q8BG71 446 aa22.09■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Tyw1Q8BJM7 721 aa22.09■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Pih1d2Q8CHR9 315 aa22.09■■□□□ 1.13
Upf3a-201ENSMUST00000043767 NlnQ91YP2 704 aa22.09■■□□□ 1.13
Upf3a-201ENSMUST00000043767 EbplQ9D0P0 206 aa22.09■■□□□ 1.13
Upf3a-201ENSMUST00000043767 TesclQ9DAJ7 231 aa22.09■■□□□ 1.13
Upf3a-201ENSMUST00000043767 TrehQ9JLT2 576 aa22.09■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Atg2bQ80XK6 2075 aa22.09■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Cfap54Q8C6S9 3106 aa22.09■■□□□ 1.13
Upf3a-201ENSMUST00000043767 F8Q06194 2319 aa22.08■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Kcnk1O08581 336 aa22.08■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Sbk2P0C5K1 362 aa22.08■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Lrrc3P59034 257 aa22.08■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Hoxc4Q08624 264 aa22.08■■□□□ 1.13
Upf3a-201ENSMUST00000043767 PepdQ11136 493 aa22.08■■□□□ 1.13
Upf3a-201ENSMUST00000043767 VclQ64727 1066 aaKnown RBP22.08■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Ap4e1Q80V94 1122 aa22.08■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Eme1Q8BJW7 570 aa22.08■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Trim35Q8C006 501 aa22.08■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Vmn1r22Q8R2D1 302 aa22.08■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Gjd3Q91YD1 278 aa22.08■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Gtf2h2Q9JIB4 396 aa22.08■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Gstm6O35660 218 aa22.08■■□□□ 1.12
Upf3a-201ENSMUST00000043767 Gal3st3P61315 431 aa22.08■■□□□ 1.12
Upf3a-201ENSMUST00000043767 Spata6Q3U6K5 488 aa22.08■■□□□ 1.12
Upf3a-201ENSMUST00000043767 Q6P1I3 445 aa22.08■■□□□ 1.12
Upf3a-201ENSMUST00000043767 Sec24bQ80ZX0 1251 aa22.08■■□□□ 1.12
Upf3a-201ENSMUST00000043767 Rbm45Q8BHN5 476 aaKnown RBP22.08■■□□□ 1.12
Upf3a-201ENSMUST00000043767 Pi15Q8BS03 258 aa22.08■■□□□ 1.12
Upf3a-201ENSMUST00000043767 Stx19Q8R1Q0 292 aa22.08■■□□□ 1.12
Upf3a-201ENSMUST00000043767 ClyblQ8R4N0 338 aa22.08■■□□□ 1.12
Upf3a-201ENSMUST00000043767 Ankrd49Q8VE42 238 aa22.08■■□□□ 1.12
Upf3a-201ENSMUST00000043767 Slamf1Q9QUM4 343 aa22.08■■□□□ 1.12
Upf3a-201ENSMUST00000043767 Mrpl40Q9Z2Q5 206 aa22.08■■□□□ 1.12
Upf3a-201ENSMUST00000043767 CroccQ8CJ40 2009 aa22.08■■□□□ 1.12
Upf3a-201ENSMUST00000043767 Spata31d1cE9QAF1 853 aa22.07■■□□□ 1.12
Upf3a-201ENSMUST00000043767 Srp72F8VQC1 671 aa22.07■■□□□ 1.12
Upf3a-201ENSMUST00000043767 Ackr2O08707 378 aa22.07■■□□□ 1.12
Upf3a-201ENSMUST00000043767 BckdhaP50136 442 aa22.07■■□□□ 1.12
Retrieved 100 of 22,080 RNA–protein pairs in 35.1 ms