RNA–Protein interactions for RNA: ENST00000459994.2

SDF4-204, Transcript of stromal cell derived factor 4, humanhuman

TSL 5

Gene SDF4, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-204ENST00000459994 FOXM1Q08050 763 aa15.1■□□□□ 0.01
SDF4-204ENST00000459994 IRGCQ6NXR0 463 aa15.1■□□□□ 0.01
SDF4-204ENST00000459994 CEACAM20Q6UY09 585 aa15.1■□□□□ 0.01
SDF4-204ENST00000459994 NAPRTQ6XQN6 538 aa15.1■□□□□ 0.01
SDF4-204ENST00000459994 TBC1D1Q86TI0 1168 aaPredicted RBP15.1■□□□□ 0.01
SDF4-204ENST00000459994 GOLGA6L1Q8N7Z2 621 aa15.1■□□□□ 0.01
SDF4-204ENST00000459994 AVL9Q8NBF6 648 aa15.1■□□□□ 0.01
SDF4-204ENST00000459994 ANKRD49Q8WVL7 239 aa15.1■□□□□ 0.01
SDF4-204ENST00000459994 ARL8AQ96BM9 186 aa15.1■□□□□ 0.01
SDF4-204ENST00000459994 ALKBH8Q96BT7 664 aaKnown RBP15.1■□□□□ 0.01
SDF4-204ENST00000459994 TLCD1Q96CP7 247 aa15.1■□□□□ 0.01
SDF4-204ENST00000459994 PPM1MQ96MI6 270 aa15.1■□□□□ 0.01
SDF4-204ENST00000459994 ASPSCR1Q9BZE9 553 aa15.1■□□□□ 0.01
SDF4-204ENST00000459994 DERL2Q9GZP9 239 aa15.1■□□□□ 0.01
SDF4-204ENST00000459994 VPS11Q9H270 941 aa15.1■□□□□ 0.01
SDF4-204ENST00000459994 OR52A5Q9H2C5 316 aa15.1■□□□□ 0.01
SDF4-204ENST00000459994 IMP3Q9NV31 184 aaKnown RBP15.1■□□□□ 0.01
SDF4-204ENST00000459994 TMEM184BQ9Y519 407 aaPredicted RBP15.1■□□□□ 0.01
SDF4-204ENST00000459994 CCDC88CQ9P219 2028 aa15.1■□□□□ 0.01
SDF4-204ENST00000459994 ZNF462Q96JM2 2506 aa15.1■□□□□ 0.01
SDF4-204ENST00000459994 CCDC189A1A4V9 331 aa15.09■□□□□ 0.01
SDF4-204ENST00000459994 FOXO6A8MYZ6 492 aa15.09■□□□□ 0.01
SDF4-204ENST00000459994 POLR1CO15160 346 aaPredicted RBP15.09■□□□□ 0.01
SDF4-204ENST00000459994 NKX2-8O15522 239 aa15.09■□□□□ 0.01
SDF4-204ENST00000459994 RASSF9O75901 435 aa15.09■□□□□ 0.01
SDF4-204ENST00000459994 LTA4HP09960 611 aaKnown RBP15.09■□□□□ 0.01
SDF4-204ENST00000459994 CCDC166P0CW27 439 aa15.09■□□□□ 0.01
SDF4-204ENST00000459994 MTHFD1P11586 935 aaKnown RBP15.09■□□□□ 0.01
SDF4-204ENST00000459994 KRT4P19013 534 aa15.09■□□□□ 0.01
SDF4-204ENST00000459994 PDHA2P29803 388 aa15.09■□□□□ 0.01
SDF4-204ENST00000459994 HALP42357 657 aa15.09■□□□□ 0.01
SDF4-204ENST00000459994 PREPP48147 710 aa15.09■□□□□ 0.01
SDF4-204ENST00000459994 ATP6V0D1P61421 351 aa15.09■□□□□ 0.01
SDF4-204ENST00000459994 KCNAB1Q14722 419 aa15.09■□□□□ 0.01
SDF4-204ENST00000459994 ATP1A1-AS1Q5TC04 95 aa15.09■□□□□ 0.01
SDF4-204ENST00000459994 CACHD1Q5VU97 1274 aa15.09■□□□□ 0.01
SDF4-204ENST00000459994 CYHR1Q6ZMK1 362 aa15.09■□□□□ 0.01
SDF4-204ENST00000459994 PRSS42Q7Z5A4 293 aa15.09■□□□□ 0.01
SDF4-204ENST00000459994 ZNF605Q86T29 641 aa15.09■□□□□ 0.01
SDF4-204ENST00000459994 EXOC3L1Q86VI1 746 aa15.09■□□□□ 0.01
SDF4-204ENST00000459994 SRRM1Q8IYB3 904 aaKnown RBP15.09■□□□□ 0.01
SDF4-204ENST00000459994 CENPLQ8N0S6 344 aaPredicted RBP15.09■□□□□ 0.01
SDF4-204ENST00000459994 NLGN4XQ8N0W4 816 aa15.09■□□□□ 0.01
SDF4-204ENST00000459994 NLGN4YQ8NFZ3 816 aaPredicted RBP15.09■□□□□ 0.01
SDF4-204ENST00000459994 EEF1AKMT1Q8WVE0 214 aa15.09■□□□□ 0.01
SDF4-204ENST00000459994 KLHL6Q8WZ60 621 aa15.09■□□□□ 0.01
SDF4-204ENST00000459994 LINGO1Q96FE5 620 aa15.09■□□□□ 0.01
SDF4-204ENST00000459994 ATP6V1G3Q96LB4 118 aa15.09■□□□□ 0.01
SDF4-204ENST00000459994 C12orf66Q96MD2 445 aa15.09■□□□□ 0.01
SDF4-204ENST00000459994 TEFMQ96QE5 360 aaKnown RBP15.09■□□□□ 0.01
SDF4-204ENST00000459994 OR6C1Q96RD1 312 aa15.09■□□□□ 0.01
SDF4-204ENST00000459994 NMRAL1Q9HBL8 299 aa15.09■□□□□ 0.01
SDF4-204ENST00000459994 SSU72Q9NP77 194 aaKnown RBP15.09■□□□□ 0.01
SDF4-204ENST00000459994 MKS1Q9NXB0 559 aa15.09■□□□□ 0.01
SDF4-204ENST00000459994 DCDC2Q9UHG0 476 aa15.09■□□□□ 0.01
SDF4-204ENST00000459994 FER1L5A0AVI2 2057 aa15.08■□□□□ 0.01
SDF4-204ENST00000459994 TNRC6AQ8NDV7 1962 aaKnown RBP15.08■□□□□ 0
SDF4-204ENST00000459994 GOLGA8RI6L899 631 aa15.08■□□□□ 0
SDF4-204ENST00000459994 KLHL2O95198 593 aa15.08■□□□□ 0
SDF4-204ENST00000459994 SYF2O95926 243 aaKnown RBP15.08■□□□□ 0
SDF4-204ENST00000459994 GSTA1P08263 222 aa15.08■□□□□ 0
SDF4-204ENST00000459994 ACADLP28330 430 aa15.08■□□□□ 0
SDF4-204ENST00000459994 CCT5P48643 541 aa15.08■□□□□ 0
SDF4-204ENST00000459994 DLG1Q12959 904 aa15.08■□□□□ 0
SDF4-204ENST00000459994 CSHL1Q14406 222 aa15.08■□□□□ 0
SDF4-204ENST00000459994 FAM83EQ2M2I3 478 aa15.08■□□□□ 0
SDF4-204ENST00000459994 TSNAXIP1Q2TAA8 658 aa15.08■□□□□ 0
SDF4-204ENST00000459994 CAPRIN2Q6IMN6 1127 aaKnown RBP15.08■□□□□ 0
SDF4-204ENST00000459994 RASGRP3Q8IV61 690 aa15.08■□□□□ 0
SDF4-204ENST00000459994 VRK3Q8IV63 474 aa15.08■□□□□ 0
SDF4-204ENST00000459994 SPNS2Q8IVW8 549 aa15.08■□□□□ 0
SDF4-204ENST00000459994 MYO1HQ8N1T3 1032 aa15.08■□□□□ 0
SDF4-204ENST00000459994 BANPQ8N9N5 519 aa15.08■□□□□ 0
SDF4-204ENST00000459994 KCTD4Q8WVF5 259 aa15.08■□□□□ 0
SDF4-204ENST00000459994 ZBTB9Q96C00 473 aa15.08■□□□□ 0
SDF4-204ENST00000459994 GPR78Q96P69 363 aa15.08■□□□□ 0
SDF4-204ENST00000459994 SMC6Q96SB8 1091 aa15.08■□□□□ 0
SDF4-204ENST00000459994 MAP3K3Q99759 626 aa15.08■□□□□ 0
SDF4-204ENST00000459994 IGSF5Q9NSI5 407 aa15.08■□□□□ 0
SDF4-204ENST00000459994 PCMTD2Q9NV79 361 aa15.08■□□□□ 0
SDF4-204ENST00000459994 EPHA6Q9UF33 1036 aa15.08■□□□□ 0
SDF4-204ENST00000459994 NOVA2Q9UNW9 492 aaKnown RBP15.08■□□□□ 0
SDF4-204ENST00000459994 HELZ2Q9BYK8 2649 aaKnown RBP15.08■□□□□ 0
SDF4-204ENST00000459994 HMGB1P1B2RPK0 211 aaPredicted RBP15.07■□□□□ 0
SDF4-204ENST00000459994 B8ZZF3 427 aa15.07■□□□□ 0
SDF4-204ENST00000459994 KIAA0754O94854 1291 aa15.07■□□□□ 0
SDF4-204ENST00000459994 MATN4O95460 622 aa15.07■□□□□ 0
SDF4-204ENST00000459994 ITGB2P05107 769 aa15.07■□□□□ 0
SDF4-204ENST00000459994 SLC35G4P0C7Q5 338 aa15.07■□□□□ 0
SDF4-204ENST00000459994 PRKAR1AP10644 381 aa15.07■□□□□ 0
SDF4-204ENST00000459994 FOLR1P15328 257 aa15.07■□□□□ 0
SDF4-204ENST00000459994 CD1DP15813 335 aa15.07■□□□□ 0
SDF4-204ENST00000459994 CRHR1P34998 444 aa15.07■□□□□ 0
SDF4-204ENST00000459994 IRF9Q00978 393 aa15.07■□□□□ 0
SDF4-204ENST00000459994 NFATC3Q12968 1075 aa15.07■□□□□ 0
SDF4-204ENST00000459994 GPS2Q13227 327 aa15.07■□□□□ 0
SDF4-204ENST00000459994 TTMPQ5BVD1 217 aa15.07■□□□□ 0
SDF4-204ENST00000459994 PIWIL4Q7Z3Z4 852 aaKnown RBP15.07■□□□□ 0
SDF4-204ENST00000459994 RBM12BQ8IXT5 1001 aaKnown RBP15.07■□□□□ 0
SDF4-204ENST00000459994 C4orf33Q8N1A6 199 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms