RNA–Protein interactions for RNA: ENST00000372837.3

CHCHD1-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 1, humanhuman

TSL 2 BASIC

Gene CHCHD1, Length 1,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1-202ENST00000372837 TMEM248Q9NWD8 314 aa12.57□□□□□ -0.4
CHCHD1-202ENST00000372837 OBP2AQ9NY56 170 aa12.57□□□□□ -0.4
CHCHD1-202ENST00000372837 PILRBQ9UKJ0 227 aa12.57□□□□□ -0.4
CHCHD1-202ENST00000372837 TIMM13Q9Y5L4 95 aaPredicted RBP12.57□□□□□ -0.4
CHCHD1-202ENST00000372837 CORINQ9Y5Q5 1042 aa12.57□□□□□ -0.4
CHCHD1-202ENST00000372837 DNAJC15Q9Y5T4 150 aa12.57□□□□□ -0.4
CHCHD1-202ENST00000372837 PTPRBP23467 1997 aa12.57□□□□□ -0.4
CHCHD1-202ENST00000372837 ZNF638Q14966 1978 aaKnown RBP12.57□□□□□ -0.4
CHCHD1-202ENST00000372837 ADAMTS9Q9P2N4 1935 aa12.56□□□□□ -0.4
CHCHD1-202ENST00000372837 TMEM233B4DJY2 109 aa12.56□□□□□ -0.4
CHCHD1-202ENST00000372837 NR5A2O00482 541 aa12.56□□□□□ -0.4
CHCHD1-202ENST00000372837 KLK8O60259 260 aa12.56□□□□□ -0.4
CHCHD1-202ENST00000372837 SYNCRIPO60506 623 aaKnown RBP12.56□□□□□ -0.4
CHCHD1-202ENST00000372837 SOAT2O75908 522 aa12.56□□□□□ -0.4
CHCHD1-202ENST00000372837 CNTN5O94779 1100 aa12.56□□□□□ -0.4
CHCHD1-202ENST00000372837 PRAMEF12O95522 483 aa12.56□□□□□ -0.4
CHCHD1-202ENST00000372837 CYBBP04839 570 aa12.56□□□□□ -0.4
CHCHD1-202ENST00000372837 HNRNPLP14866 589 aaKnown RBP eCLIP12.56□□□□□ -0.4
CHCHD1-202ENST00000372837 MSH3P20585 1137 aa12.56□□□□□ -0.4
CHCHD1-202ENST00000372837 OGNP20774 298 aaKnown RBP12.56□□□□□ -0.4
CHCHD1-202ENST00000372837 CAPN3P20807 821 aa12.56□□□□□ -0.4
CHCHD1-202ENST00000372837 SAT1P21673 171 aa12.56□□□□□ -0.4
CHCHD1-202ENST00000372837 SERPINB1P30740 379 aa12.56□□□□□ -0.4
CHCHD1-202ENST00000372837 OPRL1P41146 370 aa12.56□□□□□ -0.4
CHCHD1-202ENST00000372837 MAGEA11P43364 429 aa12.56□□□□□ -0.4
CHCHD1-202ENST00000372837 CCR10P46092 362 aa12.56□□□□□ -0.4
CHCHD1-202ENST00000372837 BRCC3P46736 316 aa12.56□□□□□ -0.4
CHCHD1-202ENST00000372837 YBEYP58557 167 aaPredicted RBP12.56□□□□□ -0.4
CHCHD1-202ENST00000372837 ERVK-8P63133 956 aa12.56□□□□□ -0.4
CHCHD1-202ENST00000372837 PPP2R2BQ00005 443 aa12.56□□□□□ -0.4
CHCHD1-202ENST00000372837 ZNF45Q02386 682 aa12.56□□□□□ -0.4
CHCHD1-202ENST00000372837 TEKQ02763 1124 aa12.56□□□□□ -0.4
CHCHD1-202ENST00000372837 YWHAHQ04917 246 aaPredicted RBP12.56□□□□□ -0.4
CHCHD1-202ENST00000372837 PRKG2Q13237 762 aa12.56□□□□□ -0.4
CHCHD1-202ENST00000372837 KEAP1Q14145 624 aa12.56□□□□□ -0.4
CHCHD1-202ENST00000372837 NEDD8Q15843 81 aa12.56□□□□□ -0.4
CHCHD1-202ENST00000372837 CTF1Q16619 201 aa12.56□□□□□ -0.4
CHCHD1-202ENST00000372837 PARP15Q460N3 678 aa12.56□□□□□ -0.4
CHCHD1-202ENST00000372837 TOR1AIP1Q5JTV8 583 aa12.56□□□□□ -0.4
CHCHD1-202ENST00000372837 HECTD2Q5U5R9 776 aa12.56□□□□□ -0.4
CHCHD1-202ENST00000372837 MARC1Q5VT66 337 aa12.56□□□□□ -0.4
CHCHD1-202ENST00000372837 PEAR1Q5VY43 1037 aaPredicted RBP12.56□□□□□ -0.4
CHCHD1-202ENST00000372837 ITIH5Q86UX2 942 aa12.56□□□□□ -0.4
CHCHD1-202ENST00000372837 ZCCHC7Q8N3Z6 543 aaKnown RBP12.56□□□□□ -0.4
CHCHD1-202ENST00000372837 MFSD4AQ8N468 514 aa12.56□□□□□ -0.4
CHCHD1-202ENST00000372837 TEX26Q8N6G2 289 aa12.56□□□□□ -0.4
CHCHD1-202ENST00000372837 CHDHQ8NE62 594 aaPredicted RBP12.56□□□□□ -0.4
CHCHD1-202ENST00000372837 OR5K1Q8NHB7 308 aa12.56□□□□□ -0.4
CHCHD1-202ENST00000372837 SPATA22Q8NHS9 363 aa12.56□□□□□ -0.4
CHCHD1-202ENST00000372837 TWIST2Q8WVJ9 160 aa12.56□□□□□ -0.4
CHCHD1-202ENST00000372837 REXO5Q96IC2 774 aaKnown RBP12.56□□□□□ -0.4
CHCHD1-202ENST00000372837 MUS81Q96NY9 551 aa12.56□□□□□ -0.4
CHCHD1-202ENST00000372837 PHF12Q96QT6 1004 aa12.56□□□□□ -0.4
CHCHD1-202ENST00000372837 NODALQ96S42 347 aa12.56□□□□□ -0.4
CHCHD1-202ENST00000372837 FUNDC2Q9BWH2 189 aa12.56□□□□□ -0.4
CHCHD1-202ENST00000372837 ZYG11BQ9C0D3 744 aa12.56□□□□□ -0.4
CHCHD1-202ENST00000372837 GABARAPL1Q9H0R8 117 aa12.56□□□□□ -0.4
CHCHD1-202ENST00000372837 SP110Q9HB58 689 aa12.56□□□□□ -0.4
CHCHD1-202ENST00000372837 TMEM30AQ9NV96 361 aa12.56□□□□□ -0.4
CHCHD1-202ENST00000372837 FAM118AQ9NWS6 357 aa12.56□□□□□ -0.4
CHCHD1-202ENST00000372837 UBP1Q9NZI7 540 aa12.56□□□□□ -0.4
CHCHD1-202ENST00000372837 SLC6A14Q9UN76 642 aa12.56□□□□□ -0.4
CHCHD1-202ENST00000372837 VPS9D1Q9Y2B5 631 aa12.56□□□□□ -0.4
CHCHD1-202ENST00000372837 PCDHB9Q9Y5E1 797 aa12.56□□□□□ -0.4
CHCHD1-202ENST00000372837 ORC6Q9Y5N6 252 aa12.56□□□□□ -0.4
CHCHD1-202ENST00000372837 HEMK1Q9Y5R4 338 aaPredicted RBP12.56□□□□□ -0.4
CHCHD1-202ENST00000372837 SNX10Q9Y5X0 201 aa12.56□□□□□ -0.4
CHCHD1-202ENST00000372837 ATMQ13315 3056 aa12.56□□□□□ -0.4
CHCHD1-202ENST00000372837 PTPRDP23468 1912 aa12.56□□□□□ -0.4
CHCHD1-202ENST00000372837 E2F8A0AVK6 867 aa12.55□□□□□ -0.4
CHCHD1-202ENST00000372837 FAM172BPA6NC97 362 aa12.55□□□□□ -0.4
CHCHD1-202ENST00000372837 M0R3G1 203 aa12.55□□□□□ -0.4
CHCHD1-202ENST00000372837 UPK1AO00322 258 aa12.55□□□□□ -0.4
CHCHD1-202ENST00000372837 MSI1O43347 362 aaKnown RBP12.55□□□□□ -0.4
CHCHD1-202ENST00000372837 DPM1O60762 260 aa12.55□□□□□ -0.4
CHCHD1-202ENST00000372837 PMPCBO75439 489 aa12.55□□□□□ -0.4
CHCHD1-202ENST00000372837 SLC22A3O75751 556 aa12.55□□□□□ -0.4
CHCHD1-202ENST00000372837 CDK14O94921 469 aa12.55□□□□□ -0.4
CHCHD1-202ENST00000372837 SNAP29O95721 258 aa12.55□□□□□ -0.4
CHCHD1-202ENST00000372837 MT-CYBP00156 380 aaPredicted RBP12.55□□□□□ -0.4
CHCHD1-202ENST00000372837 EPOP01588 193 aa12.55□□□□□ -0.4
CHCHD1-202ENST00000372837 FGF1P05230 155 aa12.55□□□□□ -0.4
CHCHD1-202ENST00000372837 UROSP10746 265 aa12.55□□□□□ -0.4
CHCHD1-202ENST00000372837 GGT1P19440 569 aa12.55□□□□□ -0.4
CHCHD1-202ENST00000372837 HLA-DPA1P20036 260 aa12.55□□□□□ -0.4
CHCHD1-202ENST00000372837 DRD1P21728 446 aa12.55□□□□□ -0.4
CHCHD1-202ENST00000372837 PCMT1P22061 227 aa12.55□□□□□ -0.4
CHCHD1-202ENST00000372837 FDXRP22570 491 aa12.55□□□□□ -0.4
CHCHD1-202ENST00000372837 ITPKAP23677 461 aa12.55□□□□□ -0.4
CHCHD1-202ENST00000372837 PSMA3P25788 255 aa12.55□□□□□ -0.4
CHCHD1-202ENST00000372837 MAPKAPK2P49137 400 aa12.55□□□□□ -0.4
CHCHD1-202ENST00000372837 PRIM2P49643 509 aa12.55□□□□□ -0.4
CHCHD1-202ENST00000372837 ECT2LQ008S8 904 aa12.55□□□□□ -0.4
CHCHD1-202ENST00000372837 IL10RBQ08334 325 aa12.55□□□□□ -0.4
CHCHD1-202ENST00000372837 CTBP1Q13363 440 aa12.55□□□□□ -0.4
CHCHD1-202ENST00000372837 CAMK2BQ13554 666 aa12.55□□□□□ -0.4
CHCHD1-202ENST00000372837 RUNX3Q13761 415 aa12.55□□□□□ -0.4
CHCHD1-202ENST00000372837 FBXO43Q4G163 708 aa12.55□□□□□ -0.4
CHCHD1-202ENST00000372837 XKR7Q5GH72 579 aa12.55□□□□□ -0.4
CHCHD1-202ENST00000372837 TPGS2Q68CL5 300 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms