RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 TTC4O95801 387 aa19.78■□□□□ 0.76
VTI1B-205ENST00000555543 MT-ND3P03897 115 aa19.78■□□□□ 0.76
VTI1B-205ENST00000555543 ITGB2P05107 769 aa19.78■□□□□ 0.76
VTI1B-205ENST00000555543 PRKAR1AP10644 381 aa19.78■□□□□ 0.76
VTI1B-205ENST00000555543 ELK3P41970 407 aa19.78■□□□□ 0.76
VTI1B-205ENST00000555543 RPL21P46778 160 aaKnown RBP19.78■□□□□ 0.76
VTI1B-205ENST00000555543 GABRA4P48169 554 aa19.78■□□□□ 0.76
VTI1B-205ENST00000555543 GPS2Q13227 327 aa19.78■□□□□ 0.76
VTI1B-205ENST00000555543 CUL1Q13616 776 aa19.78■□□□□ 0.76
VTI1B-205ENST00000555543 TBR1Q16650 682 aa19.78■□□□□ 0.76
VTI1B-205ENST00000555543 SLC5A12Q1EHB4 618 aa19.78■□□□□ 0.76
VTI1B-205ENST00000555543 KLHL38Q2WGJ6 581 aa19.78■□□□□ 0.76
VTI1B-205ENST00000555543 SPANXN3Q5MJ09 141 aa19.78■□□□□ 0.76
VTI1B-205ENST00000555543 ATP1A1-AS1Q5TC04 95 aa19.78■□□□□ 0.76
VTI1B-205ENST00000555543 FAM199XQ6PEV8 388 aaPredicted RBP19.78■□□□□ 0.76
VTI1B-205ENST00000555543 PDIK1LQ8N165 341 aa19.78■□□□□ 0.76
VTI1B-205ENST00000555543 C2CD4AQ8NCU7 369 aaPredicted RBP19.78■□□□□ 0.76
VTI1B-205ENST00000555543 DENND1AQ8TEH3 1009 aa19.78■□□□□ 0.76
VTI1B-205ENST00000555543 KCNJ9Q92806 393 aa19.78■□□□□ 0.76
VTI1B-205ENST00000555543 RAD51AP1Q96B01 352 aa19.78■□□□□ 0.76
VTI1B-205ENST00000555543 RUFY1Q96T51 708 aa19.78■□□□□ 0.76
VTI1B-205ENST00000555543 EFHD1Q9BUP0 239 aa19.78■□□□□ 0.76
VTI1B-205ENST00000555543 PADI1Q9ULC6 663 aa19.78■□□□□ 0.76
VTI1B-205ENST00000555543 EIF4E1BA6NMX2 242 aaKnown RBP19.77■□□□□ 0.76
VTI1B-205ENST00000555543 ARHGEF33A8MVX0 844 aa19.77■□□□□ 0.76
VTI1B-205ENST00000555543 EFCAB8A8MWE9 144 aa19.77■□□□□ 0.76
VTI1B-205ENST00000555543 CTSBP07858 339 aa19.77■□□□□ 0.76
VTI1B-205ENST00000555543 CCNYL3P0C7X3 344 aa19.77■□□□□ 0.76
VTI1B-205ENST00000555543 MAGP20916 626 aa19.77■□□□□ 0.76
VTI1B-205ENST00000555543 GABRB3P28472 473 aa19.77■□□□□ 0.76
VTI1B-205ENST00000555543 OAS2P29728 719 aaKnown RBP19.77■□□□□ 0.76
VTI1B-205ENST00000555543 CASQ1P31415 396 aa19.77■□□□□ 0.76
VTI1B-205ENST00000555543 C2orf54Q08AI8 447 aa19.77■□□□□ 0.76
VTI1B-205ENST00000555543 CDC20Q12834 499 aa19.77■□□□□ 0.76
VTI1B-205ENST00000555543 HIF1AQ16665 826 aa19.77■□□□□ 0.76
VTI1B-205ENST00000555543 EEF1AKMT2Q5JPI9 291 aaKnown RBP19.77■□□□□ 0.76
VTI1B-205ENST00000555543 EXD3Q8N9H8 876 aa19.77■□□□□ 0.76
VTI1B-205ENST00000555543 SPATA4Q8NEY3 305 aa19.77■□□□□ 0.76
VTI1B-205ENST00000555543 CFAP36Q96G28 342 aa19.77■□□□□ 0.76
VTI1B-205ENST00000555543 TCTN2Q96GX1 697 aa19.77■□□□□ 0.76
VTI1B-205ENST00000555543 FOPNLQ96NB1 174 aa19.77■□□□□ 0.76
VTI1B-205ENST00000555543 GPR21Q99679 349 aa19.77■□□□□ 0.76
VTI1B-205ENST00000555543 NAT9Q9BTE0 207 aa19.77■□□□□ 0.76
VTI1B-205ENST00000555543 AARSD1Q9BTE6 412 aaKnown RBP19.77■□□□□ 0.76
VTI1B-205ENST00000555543 CCDC68Q9H2F9 335 aa19.77■□□□□ 0.76
VTI1B-205ENST00000555543 SYTL2Q9HCH5 934 aa19.77■□□□□ 0.76
VTI1B-205ENST00000555543 SLC39A10Q9ULF5 831 aa19.77■□□□□ 0.76
VTI1B-205ENST00000555543 SNX24Q9Y343 169 aa19.77■□□□□ 0.76
VTI1B-205ENST00000555543 PCDHB3Q9Y5E6 796 aa19.77■□□□□ 0.76
VTI1B-205ENST00000555543 TEX264Q9Y6I9 313 aa19.77■□□□□ 0.76
VTI1B-205ENST00000555543 H3BMH7 237 aa19.76■□□□□ 0.75
VTI1B-205ENST00000555543 SMAPO00193 183 aa19.76■□□□□ 0.75
VTI1B-205ENST00000555543 MAP3K7O43318 606 aa19.76■□□□□ 0.75
VTI1B-205ENST00000555543 PSMB5P28074 263 aa19.76■□□□□ 0.75
VTI1B-205ENST00000555543 CCNFP41002 786 aa19.76■□□□□ 0.75
VTI1B-205ENST00000555543 TIAL1Q01085 375 aaKnown RBP eCLIP19.76■□□□□ 0.75
VTI1B-205ENST00000555543 DNASE1L3Q13609 305 aa19.76■□□□□ 0.75
VTI1B-205ENST00000555543 TTC23LQ6PF05 361 aa19.76■□□□□ 0.75
VTI1B-205ENST00000555543 CNTN4Q8IWV2 1026 aa19.76■□□□□ 0.75
VTI1B-205ENST00000555543 CD200R1Q8TD46 325 aa19.76■□□□□ 0.75
VTI1B-205ENST00000555543 CERS2Q96G23 380 aa19.76■□□□□ 0.75
VTI1B-205ENST00000555543 NDNQ99608 321 aa19.76■□□□□ 0.75
VTI1B-205ENST00000555543 RAB11FIP5Q9BXF6 653 aa19.76■□□□□ 0.75
VTI1B-205ENST00000555543 CHRNA10Q9GZZ6 450 aa19.76■□□□□ 0.75
VTI1B-205ENST00000555543 ZC3H7BQ9UGR2 993 aaKnown RBP19.76■□□□□ 0.75
VTI1B-205ENST00000555543 BSNQ9UPA5 3926 aa19.75■□□□□ 0.75
VTI1B-205ENST00000555543 RAD51CO43502 376 aa19.75■□□□□ 0.75
VTI1B-205ENST00000555543 PRICKLE3O43900 615 aaPredicted RBP19.75■□□□□ 0.75
VTI1B-205ENST00000555543 KATNA1O75449 491 aa19.75■□□□□ 0.75
VTI1B-205ENST00000555543 PSIP1O75475 530 aaKnown RBP19.75■□□□□ 0.75
VTI1B-205ENST00000555543 FAM87AP0C7U9 286 aa19.75■□□□□ 0.75
VTI1B-205ENST00000555543 TCN2P20062 427 aa19.75■□□□□ 0.75
VTI1B-205ENST00000555543 CYP2A7P20853 494 aa19.75■□□□□ 0.75
VTI1B-205ENST00000555543 RORAP35398 523 aa19.75■□□□□ 0.75
VTI1B-205ENST00000555543 ITGA1P56199 1179 aa19.75■□□□□ 0.75
VTI1B-205ENST00000555543 ARL4CP56559 192 aa19.75■□□□□ 0.75
VTI1B-205ENST00000555543 COL9A2Q14055 689 aaPredicted RBP19.75■□□□□ 0.75
VTI1B-205ENST00000555543 FASTKD3Q14CZ7 662 aaKnown RBP19.75■□□□□ 0.75
VTI1B-205ENST00000555543 STEAP4Q687X5 459 aa19.75■□□□□ 0.75
VTI1B-205ENST00000555543 LCN10Q6JVE6 187 aa19.75■□□□□ 0.75
VTI1B-205ENST00000555543 TRMT10BQ6PF06 316 aaKnown RBP19.75■□□□□ 0.75
VTI1B-205ENST00000555543 ZNF517Q6ZMY9 492 aaPredicted RBP19.75■□□□□ 0.75
VTI1B-205ENST00000555543 ANKMY2Q8IV38 441 aa19.75■□□□□ 0.75
VTI1B-205ENST00000555543 ACTR5Q9H9F9 607 aaPredicted RBP19.75■□□□□ 0.75
VTI1B-205ENST00000555543 PCMTD2Q9NV79 361 aa19.75■□□□□ 0.75
VTI1B-205ENST00000555543 KLHL42Q9P2K6 505 aa19.75■□□□□ 0.75
VTI1B-205ENST00000555543 SERTAD3Q9UJW9 196 aa19.75■□□□□ 0.75
VTI1B-205ENST00000555543 DHRS7Q9Y394 339 aa19.75■□□□□ 0.75
VTI1B-205ENST00000555543 PCDHGA6Q9Y5G7 932 aa19.75■□□□□ 0.75
VTI1B-205ENST00000555543 MRFAP1Q9Y605 127 aa19.75■□□□□ 0.75
VTI1B-205ENST00000555543 COMMD10Q9Y6G5 202 aa19.75■□□□□ 0.75
VTI1B-205ENST00000555543 A0A1W2PPV9 198 aa19.74■□□□□ 0.75
VTI1B-205ENST00000555543 FURINP09958 794 aa19.74■□□□□ 0.75
VTI1B-205ENST00000555543 CARSP49589 748 aaKnown RBP19.74■□□□□ 0.75
VTI1B-205ENST00000555543 RPS18P62269 152 aaKnown RBP19.74■□□□□ 0.75
VTI1B-205ENST00000555543 FASTKQ14296 549 aaKnown RBP19.74■□□□□ 0.75
VTI1B-205ENST00000555543 TTLL9Q3SXZ7 439 aa19.74■□□□□ 0.75
VTI1B-205ENST00000555543 RBM20Q5T481 1227 aaKnown RBP19.74■□□□□ 0.75
VTI1B-205ENST00000555543 C16orf46Q6P387 395 aa19.74■□□□□ 0.75
VTI1B-205ENST00000555543 NEK10Q6ZWH5 1172 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms